Basic Information

Insect: Eufriesea mexicana
Gene Symbol: lola
Assembly: GCA_001483705.1
Location: NW:723468-731806[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.5e-16 4.9e-13 47.7 0.0 2 42 374 415 373 418 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.5e-16	4.9e-13	47.7	0.0	2	42	374	415	373	418	0.94

Sequence Information

Coding Sequence: ATGTCGATGCAACAGTTTTGTTTGCGGTGGAACAATCATCAACCGAATTTTATTTCGGTGTTCTCTAATCTATTAAATAATGAAACTTTGGTGGATGTGACATTAGCTGCTGAAGGCAGACATCTCCAGGCGCACAAAGTTGTTTTGTCTGCATGCAGTACATATTTTCAATCATTGTTTACTGTGAATCCATGTCAACATCCAATTGTCATATTAAAGGATGTAAAATTCTCTGACTTGAAAATCATGGTTGATTTTATGTATTATGGCGAAGTAAACATATCACAGGATCAGTTACCATCTATCATAAAGACTGCAGagagtttaaaaataaaaggacTTGCAGAAATGCACAGTGCTTCTTTAACCAAGTGGCCAAGTGGTAGTAGTGAACCTGGAGGAGGAGATCGTGGAGAATCTTGTTCACCTAGTCCGTCACCATTGTCTCCATCTTTTCGAAGAAAGAGATTAAGAAAATCATCCACTGGGTCAACATCTGGATCTGGTGACAAACCAGAAGAAATGAATGAAATCACTTTAGTTGCCACCAATATCGTAAAACCAGAACCATTAATAGTTTCACAAGAAGGCAATGAAAGTCTAAGAAGACCTGTCAATACCAGTACTGAATCTCAAGGAAGTATTGATGAAGATCAAATATCAATTATGAGTAATATGGAAAACAGTTCAGCAACAACACCAGCACAAAGTGATGGTTCAATACAAGATGTGAGTCAACAATCAGGAGGAAATGTGGCACAAAGTTCAGTTTCTTCTCAACCACCTGCACATCAAGgattgcaatggacTATTATGGAGCATACATATCCACGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGATCCAAGCGTCATCAGCTTTTACCACGCCCGAAATAACAGCTTCTTCGACCATCAGTGATCAGTACTCTGGTACCAGCACGACTGGTTCCAGTTGCGCCTTGACGAATTATCCAAACTCCTCACACGGGACATTGCAGCACGCATCGTCGGGCGGCCCTTCACCGTCGACACAGTGCCCGAGTAACTGCCAGAGTCCGTGTGCCAGTCCACAAACCGCAATAAAGAGGAAACGATCGACAAATCCGCAGGCGGATGAGAATTTTATCAGAGCATTAGACGCTGTACGATATGGCGGCATAGGATTCTGTAAGGCGGCTAGAATGTTCGGTGTGAACAATCGAACACTTTGGCTGGAATACAAAAAGCGCGGTTACCCGAACAATCGACCCAGTTTGAAGTCGAGGGTCAAACAAGAAGTGAATTCCTCACCGCCACCAGCACCGTCGGCGCAACCAGTTAATTCACAGAGTCCCACGCCAATGGGTCCTCCCACCACTCCACATAGTACACACAATACCCACAGCACGCATACCATGCTGACCACTCATAGTCCGCATACGATGTTAAGTGGTTACATTGATAGCAGGCATACAGATTATGCATTGCCCAGTACTACAATGCCAATCAATTTACACGTTTGCAAGCAGGTAGGCCCGAAGAGGTGTCGTCTGTTGCGCCAGCCACGAGTGAAGAAGGAGTCGAACCATTTATCACCAGACAGCGAGGCATCTTCACCACATATCGTCTCTTCCTCCATCTATGTGACTACGCCGACGTTGAACCTGCCACAAACGTCGAGAAGCTGGGAGGAAACGAGAATCTCGTCGCCTCCGCAATCGATTCTGGTGAACCAGCCTAGTCTATTAACAGTGACCACCTCGACGAACCTGTTGACCGTACCTCAGCCATCCTACTTGATGAAACAACACTCCCACCCGCTCTTGTCTAATCAGCAACAGTCTAGTAGTGGGAATTACTGGATACACAGGCAACACTCGAATCCGGAGTTCCCCAGAAGGACCACCAGTCCGTCGATCGTCGTCGAACCAGCGCCTGTTGTTAAAACGGAGGAAGAAAGTACAGAGGAGTCAATTGCTATGACTACTACCGATACTGCAGGGTCTTCTTCAGCACTGAGAGTGAAGACAACGGAACTTAGACGGAGTTCCTCGTCACCACATACGACAAGCAGGGATACTCGAGAAAGCACTGGAGATCTGCGTCTTGGTCACTGTCCACTTTTGCGTCCAGGTCCAGCTCTAGGCTGCAATCACTGCTGGAACACGATAGATGCCCACGGGAGGACGCTTCGAAGGAAAACGAAGTTTCATTGCCCTGAATGTCAAGCCAACTTGTGTATTGTACCTTGTTTCCAAGAGTACCACGAGCAACGACGAGAACTGAAGCTGAAACCTTTACCGAAAACCAGTTCAGTCTAA
Protein Sequence: MSMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHSASLTKWPSGSSEPGGGDRGESCSPSPSPLSPSFRRKRLRKSSTGSTSGSGDKPEEMNEITLVATNIVKPEPLIVSQEGNESLRRPVNTSTESQGSIDEDQISIMSNMENSSATTPAQSDGSIQDVSQQSGGNVAQSSVSSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITASSTISDQYSGTSTTGSSCALTNYPNSSHGTLQHASSGGPSPSTQCPSNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPAPSAQPVNSQSPTPMGPPTTPHSTHNTHSTHTMLTTHSPHTMLSGYIDSRHTDYALPSTTMPINLHVCKQVGPKRCRLLRQPRVKKESNHLSPDSEASSPHIVSSSIYVTTPTLNLPQTSRSWEETRISSPPQSILVNQPSLLTVTTSTNLLTVPQPSYLMKQHSHPLLSNQQQSSSGNYWIHRQHSNPEFPRRTTSPSIVVEPAPVVKTEEESTEESIAMTTTDTAGSSSALRVKTTELRRSSSSPHTTSRDTRESTGDLRLGHCPLLRPGPALGCNHCWNTIDAHGRTLRRKTKFHCPECQANLCIVPCFQEYHEQRRELKLKPLPKTSSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01539690;
90% Identity: iTF_00684241; iTF_00231909; iTF_00214471; iTF_00232679; iTF_00214320; iTF_00232533; iTF_00232064; iTF_00982887; iTF_00983043; iTF_01539690; iTF_01539522; iTF_00676109; iTF_00675941; iTF_01122989; iTF_01123144; iTF_00141294; iTF_00141160; iTF_00964561; iTF_00964388; iTF_00966100; iTF_00965958; iTF_01417783; iTF_01417623; iTF_00684858; iTF_00684719; iTF_00306365; iTF_00306171; iTF_00142398; iTF_00142539; iTF_00761054; iTF_00760909; iTF_00982366; iTF_00982209;
80% Identity: iTF_00684241;