Amei000424.1
Basic Information
- Insect
- Apis mellifera
- Gene Symbol
- lola
- Assembly
- GCA_003254395.2
- Location
- NC:4684651-4693877[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-16 4.7e-13 47.7 0.0 2 42 374 415 373 418 0.94
Sequence Information
- Coding Sequence
- ATGACGATGCAACAATTCTGTTTACGATGGAACAATCATCAACCAAATTTCATTTCGgtgttttcaaatttgttaaataatgagACTTTGGTGGATGTGACATTAGCTGCTGAAGGCAGGCATCTTCAAGCACACAAAGTTGTTCTATCTGCATGTAGTACATATTTCCAGTCATTGTTTACTGTGAATCCATGTCAACATCCCATTGTGATATTAAAGGATGTAAAATTCtcagatttgaaaattatggttgattttatgtattatggtGAAGTAAATATATCACAAGATCAATTACCGTCTATTATAAAGacTGCAGagagtttgaaaataaaaggacTCGCAGAAATGCACAGTGCTTCTTTAACAAAATGGCCAAGTGGTAGTGAACCTGGAGGAGGAGATCGTGGAGAATCTTGTTCACCCAGTCCTTCTCCATTGTCACCGTCCTTTCGTAGAAAGAGATTAAGAAAATCATCAACAGGGTCAACATCTGGATCTGGTGATAAACCAgaagaaatgaatgaaatcaCTTTAGTTGCTACCAATATTGTAAAACCAGAACCACTAATAGTTTcacaagaaaataatgaaaatgtaagAAGACCTGTTAATACGAATACTGAATCTCAAGGAAGCATTGATGAGGATCAAATATCAATTatgagTAATATGGAGAATAGTTCAACAACAACACCAGCACAAAGTGATGGCTCGATACAAGATGTAAGTCAACAATCAGGAGGAAATGTAGCCCAAACTTCAGTTTCTTCACAACAACCTCCTGCACATCAAGGATTGCAATGGACTATTATGGAGCATACATATCCACGTTTCGCTCTGTCTTCGTGTCAAACGAATCTGTCGATCCAAGCATCATCAGCTTTTACCACGCCCGAAATAACAGCTTCTTCGACCATCAGCGATCAGTATTCTGGTACCAGCACAACTGGTTCCAGTTGCGCCCTGACGAATTATCCGAATTCCTCGCATGGGACATTGCAGCACACATCGTCGAGCGGCCCTTCACCGTCGACACAGTGCCCGAGTAACTGCCAGAGCCCATGCGCCAGTCCACAAACCGCAATAAAGAGAAAACGATCAACAAATCCGCAAGCAGATGAGAACTTTATCAGGGCGTTAGATGCCGTACGGTACGGTGGCATAGGTTTCTGTAAAGCGGCTAGGATGTTCGGTGTAAATAATCGAACACTTTGGTTGGAATACAAAAAGCGCGGTTATCCGAATAATCGACCCAGTTTGAAATCGAGAGTTAAGCAAGAAGTGAATTCCTCACCGCCACCAGCTCAGGCAGCGCAGCCGGTTAATTCGCAGAGTCCTACGCCAATGGGCCCCCCCACTACTCCACACAGTACACACAATACCCATAGCACGCATACCATGCTGACCACTCATAGTCCTCATACGATGTTAAGCGGTTATATCGATAGCAGACATACGGATTACGCATTGCCAATCATTTACGCGAAGCAGGTAGGTCCGAAGAGGTATCGTCTGTTGCGCCAGCCACGTGTCAAGAAGGAGTCGAACCATTTGTCGCCGGACACGAGCGAGGCTTCCTCGCCGCACATCGTTTCCTCCCCCATCTACGTGACCACCCCGACGCTGAGCCTGCCCCAAACGTCGAAAAGCATGGACGAAACGAGAATCTCCCCGTTGCCCCCGCAATCGATTCTGGTGAACCAGCCCGGCCTGTTGACGGTGACCACCACGACTAACCTGTTGACCGTGCCCCAACCATCCTACCTGATGAAGCAACATTCCCACCCGCTCTTGTCCACACCGCAGCAACAATCGGGCGGCGGTGGAAATTACTGGATACACAGGCAACACTCGAATCCGGAGTTCCCCAGGAGGACGACAAGTCCCTCGATCGTGGTGGAACCGGCGCCGGTCATCAAAACGGAGGAGGACATCCTCGAGGATCCGATTGCAACCACCACAACCACTACCTCTACCACGGACAGCACCACTACGGCAGGATCCACGTCCGGGTTGAGGGTGAAGACTACGGAGCTCAGACGGAGTTCATCGTCGCCCCAAACAACGAGCAGGGAAACGCGAGAGAATACGGGTGATCTACGTGTCGGCCATTGTCCAGTGTTGCGTCCAGGGCCGGCACTGCGTTGTAATCATTGTTGGAACACGATAGACGCCCAAGGGAGGACGCTTCGTAGGAAAACAAAGTACCATTGTCCCCAGTGTCAGGACAACCTGTGCATCGTGCCCTGTTTCCAGGAGTATCACGAGCGACGAGAATTGAAGTTGAAACCCTTGCCGAAAACGAGTTCGGTCTAA
- Protein Sequence
- MTMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHSASLTKWPSGSEPGGGDRGESCSPSPSPLSPSFRRKRLRKSSTGSTSGSGDKPEEMNEITLVATNIVKPEPLIVSQENNENVRRPVNTNTESQGSIDEDQISIMSNMENSSTTTPAQSDGSIQDVSQQSGGNVAQTSVSSQQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITASSTISDQYSGTSTTGSSCALTNYPNSSHGTLQHTSSSGPSPSTQCPSNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPAQAAQPVNSQSPTPMGPPTTPHSTHNTHSTHTMLTTHSPHTMLSGYIDSRHTDYALPIIYAKQVGPKRYRLLRQPRVKKESNHLSPDTSEASSPHIVSSPIYVTTPTLSLPQTSKSMDETRISPLPPQSILVNQPGLLTVTTTTNLLTVPQPSYLMKQHSHPLLSTPQQQSGGGGNYWIHRQHSNPEFPRRTTSPSIVVEPAPVIKTEEDILEDPIATTTTTTSTTDSTTTAGSTSGLRVKTTELRRSSSSPQTTSRETRENTGDLRVGHCPVLRPGPALRCNHCWNTIDAQGRTLRRKTKYHCPQCQDNLCIVPCFQEYHERRELKLKPLPKTSSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01539690;
- 90% Identity
- iTF_00684088;
- 80% Identity
- iTF_00142539;