Emex004590.1
Basic Information
- Insect
- Eufriesea mexicana
- Gene Symbol
- Usf1
- Assembly
- GCA_001483705.1
- Location
- NW:107636-109979[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.058 2.9e+02 0.9 0.0 11 38 138 166 137 167 0.80 2 2 1.1e-07 0.00057 19.2 0.3 17 47 217 247 214 249 0.94
Sequence Information
- Coding Sequence
- ATGGATATTTTGGAGCAGCATCTCGAACAGCAGGATGTCAGCACTGTTAACGCGAAGGATGATGGCGGCACAGGAATTGTTATTGAGGAAGCAGAAATCGTGGACTGCGAAGGAGAAACTGTTGGGGAAGATGGAATGCGTTACCAAGAAGCTCTTGCATACAGAGTAGTCCAAGTAAatggcactactgctggcaatgAAATAGAACTGCCAGTTACCCAACCAGGAAATAATACTGTACAGGTCCTAACATCCCCGTTAAATGGCCAGTTTTATGTTATTGGAAATGCTAATGATGTTTTCACAACTGCGCAAACTTCTAGATCATTGGTTCCCAGGACAACTACTCTACAGATAGAAACACCAAGAAATTGTACTACTGTTCTGAAAAAGAGAGATGATAGGAGAAGAGCCACTCACAatgaagtagaacgcagacgaagagataaaataaataactggATTGCAAAGTTAGGAAAAATTATTCCTGAATGTAATGCAGGTGCAAatggtagtggtagtggcagTGGTGAAGGAAAAGCAAATTATGAAACTCAGAGCAAAGGAGGAATTTTATCAAAAGCCTGTGAATATATAACAGAATTAAGAGCAGCCAATCAGGGATTAGGACACTGTTTACGCGATAACGAAAAACTACGACAGGAAATAACTGCTTTAAAGCAACTCGTTACACAATTGAAACGTGAGAATTTTCAACTCAGGTCACAAATTTCATCCTCCACGGGACCGAACGTTGACGTTGTTCATTTGAGTCCTTAA
- Protein Sequence
- MDILEQHLEQQDVSTVNAKDDGGTGIVIEEAEIVDCEGETVGEDGMRYQEALAYRVVQVNGTTAGNEIELPVTQPGNNTVQVLTSPLNGQFYVIGNANDVFTTAQTSRSLVPRTTTLQIETPRNCTTVLKKRDDRRRATHNEVERRRRDKINNWIAKLGKIIPECNAGANGSGSGSGEGKANYETQSKGGILSKACEYITELRAANQGLGHCLRDNEKLRQEITALKQLVTQLKRENFQLRSQISSSTGPNVDVVHLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070773;
- 90% Identity
- iTF_00183675;
- 80% Identity
- iTF_00683885;