Etru003876.1
Basic Information
- Insect
- Eudonia truncicolella
- Gene Symbol
- -
- Assembly
- GCA_949315975.1
- Location
- OX438827.1:18175940-18184881[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00086 0.074 14.2 3.7 1 23 200 222 200 222 0.98 2 28 0.00069 0.06 14.5 0.8 2 20 253 271 252 273 0.93 3 28 2e-05 0.0017 19.3 0.3 3 23 304 325 302 325 0.96 4 28 0.022 1.9 9.7 3.1 1 23 376 399 376 399 0.97 5 28 0.0073 0.63 11.2 0.1 1 23 420 442 420 442 0.96 6 28 0.00032 0.028 15.5 1.6 2 23 490 511 489 511 0.96 7 28 0.00019 0.017 16.2 2.0 2 23 547 569 547 569 0.97 8 28 7.6e-05 0.0066 17.5 0.9 1 23 619 642 619 642 0.95 9 28 0.0027 0.23 12.6 0.2 1 23 702 724 702 724 0.97 10 28 0.01 0.88 10.8 5.6 2 23 736 757 735 757 0.96 11 28 0.076 6.6 8.0 1.9 2 23 769 790 768 790 0.96 12 28 0.0064 0.56 11.4 1.1 1 23 800 822 800 822 0.98 13 28 0.00088 0.077 14.1 1.4 1 23 884 906 884 906 0.95 14 28 2e-05 0.0018 19.3 0.7 1 23 914 936 914 936 0.97 15 28 0.0011 0.1 13.8 0.2 2 23 956 978 955 978 0.97 16 28 0.037 3.2 9.0 0.3 1 23 996 1018 996 1018 0.94 17 28 0.35 30 6.0 4.3 1 23 1025 1047 1025 1047 0.98 18 28 0.014 1.2 10.3 2.4 2 23 1058 1080 1057 1080 0.95 19 28 0.0054 0.47 11.7 0.1 2 23 1103 1124 1102 1124 0.95 20 28 0.99 86 4.5 0.2 2 20 1128 1146 1127 1147 0.91 21 28 0.0015 0.13 13.4 0.5 2 23 1205 1226 1204 1226 0.95 22 28 1.3 1.2e+02 4.1 4.5 5 23 1236 1254 1233 1254 0.94 23 28 0.014 1.2 10.4 0.8 2 23 1265 1287 1264 1287 0.95 24 28 0.17 15 6.9 2.5 2 23 1304 1322 1304 1322 0.94 25 28 3.6 3.1e+02 2.8 1.5 2 21 1326 1345 1326 1346 0.93 26 28 0.1 9.1 7.6 0.7 2 23 1395 1416 1394 1416 0.94 27 28 0.003 0.26 12.4 0.6 2 23 1427 1449 1426 1449 0.96 28 28 1.3 1.1e+02 4.1 2.9 1 20 1486 1505 1486 1507 0.90
Sequence Information
- Coding Sequence
- ATGGCACTCAAACTGGGAAAATGCAGACTTTGTTTGAAGCTAGGCGACTTTTATTCCATCTTCACGGTGGACAATGCCTTGCAACTGGCAGAGATGGTTATGGAATGTGCCCGAGTGAAAGTGTATGAGGGAGATGGGCTGCCTGACAAAATCTGCTCTGAGTGTATACAAAAGCTCAGTGGCGCTTATATATTTAAACAGCAGTGCGAAAGATCCGATCAGGAGTTACGGCGCAACTATGTACCTCCGGCAGgtTTAGTCACTCCACCACCTCCAAACAGACAAAGCAGCGACTCCGCACTCTCCACTCACACCGACTTGTCGAGTCAGAACAAACCGTCGTCGTCCACGGAGGGCGGCGTCACGCCCGCCAAGCGCGGGCGGAAGCGCAGCCACGAGAGCCTCGACAACACGTCGGTGAGCAGCCGCTCACACGACTACGCGCCCACCACCAAGCGCGTGTCCGAGCTGCGCGCGCCCGACAAGCGGCGCCGCACGCAGCGCGCCAACCACTCCTACGCGGACTCCGACTACGACGACGGCTCGCAGTTCTCGCCGCCGGAAACAGACTCGGATGAGCCGCTCCTCAAAAATGAACACAAGTGCACGGAGTGCGACAAAGTTTTTCACAGCCTAAAGAGTCGCGCCATACATATGCGAGTCCATTCGGCCAAAAAGGAGAAGTTGGGCGAAAACGAAGTAGTCAGCATCCCGAAGAATACGACGCGAGACGCGACCGACGACGACGACAAGTTGAACTGTGAAAAATGCGGGAAAACGTTCAAACTGAAAATAATGCTGAAAAGGCATCACGACGTTTGCGGGAAATCGCCTCAAGTGTCTCCGCAAAAGGAGCTTCTCGTGACCCTGGAGCCGATCGACGCGAAGCCGACTACTAACAAGATAGACTGCGAAATGTGCACAACGAAATTTAAAACTATCGACAATCTCGAAAAGCACATGAGGGTGGTGCACGCCGCCGTTCTCAAGAAGCGCAAGTCGGAGCCGATCGTGCAGAACGGGTACGCGACCGTGCCCTGCCTGTACTGTCGGCAGCCGTTCGAAGATTACTATGAGCACAGTTCGCACTTCACCGTGTGCCCGGAGAAGGAGGATACGTCCATTTTCGAATGTCCTATTTGCAAGAAGGTGACGTACAAGAAGTGCGCTTACTTCATGCACCTGAAGAGCTTGCACTTCGACGCGCGCGCATACGCCGGCGACCGCAAGGCGACGGCGGAGTCAGTGTCGGAGGCGTTCGTGTGCCGCATGTGCGGCGCGCGGCTGGCGTCGCAGGAGCACCTCATCACGCACCTCGCCGCGCACATGTCCCGCATGGACGACGCCGACGAGCCCGATGACATCGGTGACACCGGCGCCGACGACGACAGAGCGAGCACGATAGACGATTCCGTGTCTGTCGCCTCGGTGCATAGCAGCTCAAAATATGTTTCCAACGGCCCCCTGCAGTGTAGTATGTGTGAGAAAAGATTCAAATACAAGAAGGCTTTAGAAACTCACGAACTCAAACACTCAGAGTTAGATATTAAAACGGAACCTCCTGACAAGAGTCTGTTGTGCGAAACGCAGCGGCCGGACGTGGAGACCGAGTCTAGTCAGGAGGAGGGCGACGACAATACGTGCGACATTTGCGAAAAGCAGTTCTCGTACAAACGCTTGCTTATCCAGCACAAGCGCACCAAACACAACCAGTGTTCCGGCACAAAGCGCGCAAAAATCAACCTAAAGGACTGCTCCGTGCGCTGTCTGATATGCGACGTCGAGATGAAAGTGAGTGCTATTAACGAGCACAACCAGAAACACATATCGGTGAACATCAAGCCGAGGAACGTATACAGCTGTGCCGAATGCGGGGAGAAGTTCAAAAGCTGCAGCGCGCTGGCCAGCCACATCAAGTTCGTGCACCGGCTGAAGCAGGCGCCGACGCAGAAGCGGCCGAAGATGCTGGAGGGCGGGAACGAGCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACGAGCTCCAGAGTCACAACGACTTCGGAGAGGTTCCGGGCGCCGCCGGCGCGCCGGTCGTGGACCTGATGGGGTTCACGTGCCCAATTTGCCAAAAGAAGATGCCCACTCTCATATCCCTTAAGAGGCATGTCAATTGGCATGCGAACGTGGGGAACAACATAGAGAAAAAGATCGAATGCTTCGTGTGCAAGGAGTCGTTCCGATTCCAATGCCACTACAAAATGCACATGCGCGAGCACTACCACGACCCGAACCTAGACCCGAAGCATCTCACGTGCACCATCTGCAACCGCAAGAGTAAGCACCTCCGCGCCGCGCAGGCGCACATGAACTTCCACAAGCAGACGCGCTTCAAGTCCAAGGACTACCAGTGCTCGATATGCAAGCGCGTGTTCCAGTTCCGAAAGGTGTACCTGTCGCACATGGCGATCCACTTCAAGCGCGGCGAGAGCGTGCAGAACACGATCGTGGGCGACGCGCAGCCCGCCAGCGGCGAGCGCGCGCAGCTCGACGCCGCGCACGCCTGCCACCTGTGCGGCAAGCTGTGCGACTCCGACAACTCGCTCAAGTGCCACATCCGCTGGCACAACTCCAAGTCGTCCCTGTACGGCGCGCGCCACGACTGCTTCATCTGCGGCCTCGTGTTCACCAACAAGAGGCGGCTGGAGCTCCACACGAGGGCGCACTACGAGGACGAAAACGGACCGTTCAAGTGCACCATTTGTGGCAAAGGCTTCATCGACGAACAGTATTTCCGGAGACACGTGAAGGGACACAATTTCGACCATCAGTCGCACAAGAACAGAATTGAAAAGCTGAGAAAGGATAAAGTCAAATGCCCCATATGCTCCCGCTTCTACCCCGACTTGGTACGACTGATCCGCCACTTGAGGAGGACTCATCCCGAGAGTAAGATGATCAAAACCGACCCCGACGCCCCCCCGCCCATCTACTACTCGTGTAAGCTTTGCGCCAAAGTGTTCATGGACGAGCGGAGGCTTCAGAATCACGAAGAGGCGCATTTGCGAAAGCCCCAGTTCTTTAAGTGTAAATTCTGTGGAAAGAACACTATGTCGTTAAAGAACCACAATATTCACATTAAATCACATTTGACGAGGAACTACTCTGACAATCCATTGAAATGTACACAATGCGAGGAGACATTTGTTAAAGGATACGATTTGCACCATCATTTGCGCGACGTACATAACACCAAAGAGAGTTGGATAGCGGAGCGGACGGAACAAACCCTAGAAGGTCCGCTGAAGGAGCTTCAATGCGGCATTTGTCTGAAAGTCCTCGCCAGTAAGGGCAACTACGAGAGACACATTGATTACCACAACACGCTGAGGTGCAACTACTGTTTTGTATACTTCAGCACTTTAAGGTTCCTAGAAGGCCATCTAGCCTTCAGCTGCgacaaaaagaaattaataggAGATACTGAAATATATCCCAAGAGAATTAAGTGCCACATTTGCTATAAGGCTTTCCATTTGCAAGTGAGGTTAGATTGCCATTTGCGAACCAAACACGACATCAAAGTGTTCAAAGAAAGGTCTTCCAACAAGAAAGAAACTGTGTGTGATTATTGCTTCAGAGTATTCGAAAACGAAGACTCTCTGACGACCCACAAGATCTACCACCGTACAATCGGTTATTACGGCTGCATATATTGCAAGAGAAAGTTTAACACTCTGACATTGTATAGGAAGCACAAGAATCATCATTTCGCACAGTTGAACGTCGACAATCCGACCAAGTGCGAACATTGCGACGAAACGTTCGTCGCCTTCAGGGAGATGATCTACCACATGCGAGACGTGCACGGCGACGACAAGGAGTGGATAGTTTTGCCGAAAGACTCCATCGAGGAGACCTGCCccatttgcaacaaaattttcttcAACCTCCACCGACATATGGATTACCACGAGGAGAACAGATGCAAGAAGTGCGCGGAGTACTTCTTCTCGAGATCCGATATGGACAACCACCTCTGTGCCATAGAGAGCGATGACGAGACCCTGCAAACCAACGGTAACAGTTGCACCCCGGCGTACGAGGAGTGCCGGTTTTGCTTCAAGCCGGTCACGCGGTCCAACTCGAAGAGGCTGCATGACAACATCCACAAGACCTCCGGGGCGATATCGTGCCGGTTCTGCGATCTCAAATTCAAGACTATGGACGCATTTAACATCCACGCGTTCTCGCACAGGAGCAGGAAGTACAACAAGCGGCCGATAAAGTGTCGCAAGTGCGGCGAGAAGTTCGTCAAGTACGGCCCATTCATAAAGCACATGAAGTACGTGCACAAGTCCGCGAAGAAGGTGCACTACCGCGCCGTGGTGCGGCCCGAGCGCTGCGTGGTGTGCGGCGACGAGTTCCCCAACCTGCACAACCACTACCGCGCGCATCTGTTGCACCAGTGCCAGCTGTGCTCCAAGTACTTCACCTCCGCCAAGGTGTTCGGCCAGCACCAGTGCGGGCAGCCGGACACGGACCCGGCCAAGGTGTTCGTGTGCGACGAGAACCTGCCCGCCCTCATCAATGCTTACGTGCCGAAGGACTTGAAGGACGACGAGAAGTACTATGGGCATAGCGGTGACGAGGATGAGGAGGAAGAGGTGGACGCGCCCAAGCCGACGGCGAGGCTCAAGAACGGCGGCTCAGTGAGTAAGCCCGCGCCCGCCGAGCCCGCTGAGCCCGCCGCCGAACTAACCCAGGATGAGAAAAACCTGCATTCCATGGTGTTATCTCCGATTATATCTGACGTGCTATCCCTTTATCAGAAGAAAGAAGATTCTAAAAAAACTGTGGATGATGACGACATTGTGAATTTGGCAGACGATGACTCTATGGATATAGATATAAGCATACCGATCATAACGATTGACTAA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNALQLAEMVMECARVKVYEGDGLPDKICSECIQKLSGAYIFKQQCERSDQELRRNYVPPAGLVTPPPPNRQSSDSALSTHTDLSSQNKPSSSTEGGVTPAKRGRKRSHESLDNTSVSSRSHDYAPTTKRVSELRAPDKRRRTQRANHSYADSDYDDGSQFSPPETDSDEPLLKNEHKCTECDKVFHSLKSRAIHMRVHSAKKEKLGENEVVSIPKNTTRDATDDDDKLNCEKCGKTFKLKIMLKRHHDVCGKSPQVSPQKELLVTLEPIDAKPTTNKIDCEMCTTKFKTIDNLEKHMRVVHAAVLKKRKSEPIVQNGYATVPCLYCRQPFEDYYEHSSHFTVCPEKEDTSIFECPICKKVTYKKCAYFMHLKSLHFDARAYAGDRKATAESVSEAFVCRMCGARLASQEHLITHLAAHMSRMDDADEPDDIGDTGADDDRASTIDDSVSVASVHSSSKYVSNGPLQCSMCEKRFKYKKALETHELKHSELDIKTEPPDKSLLCETQRPDVETESSQEEGDDNTCDICEKQFSYKRLLIQHKRTKHNQCSGTKRAKINLKDCSVRCLICDVEMKVSAINEHNQKHISVNIKPRNVYSCAECGEKFKSCSALASHIKFVHRLKQAPTQKRPKMLEGGNELADFCEVVVTKAEPLDELQSHNDFGEVPGAAGAPVVDLMGFTCPICQKKMPTLISLKRHVNWHANVGNNIEKKIECFVCKESFRFQCHYKMHMREHYHDPNLDPKHLTCTICNRKSKHLRAAQAHMNFHKQTRFKSKDYQCSICKRVFQFRKVYLSHMAIHFKRGESVQNTIVGDAQPASGERAQLDAAHACHLCGKLCDSDNSLKCHIRWHNSKSSLYGARHDCFICGLVFTNKRRLELHTRAHYEDENGPFKCTICGKGFIDEQYFRRHVKGHNFDHQSHKNRIEKLRKDKVKCPICSRFYPDLVRLIRHLRRTHPESKMIKTDPDAPPPIYYSCKLCAKVFMDERRLQNHEEAHLRKPQFFKCKFCGKNTMSLKNHNIHIKSHLTRNYSDNPLKCTQCEETFVKGYDLHHHLRDVHNTKESWIAERTEQTLEGPLKELQCGICLKVLASKGNYERHIDYHNTLRCNYCFVYFSTLRFLEGHLAFSCDKKKLIGDTEIYPKRIKCHICYKAFHLQVRLDCHLRTKHDIKVFKERSSNKKETVCDYCFRVFENEDSLTTHKIYHRTIGYYGCIYCKRKFNTLTLYRKHKNHHFAQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWIVLPKDSIEETCPICNKIFFNLHRHMDYHEENRCKKCAEYFFSRSDMDNHLCAIESDDETLQTNGNSCTPAYEECRFCFKPVTRSNSKRLHDNIHKTSGAISCRFCDLKFKTMDAFNIHAFSHRSRKYNKRPIKCRKCGEKFVKYGPFIKHMKYVHKSAKKVHYRAVVRPERCVVCGDEFPNLHNHYRAHLLHQCQLCSKYFTSAKVFGQHQCGQPDTDPAKVFVCDENLPALINAYVPKDLKDDEKYYGHSGDEDEEEEVDAPKPTARLKNGGSVSKPAPAEPAEPAAELTQDEKNLHSMVLSPIISDVLSLYQKKEDSKKTVDDDDIVNLADDDSMDIDISIPIITID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00448353;
- 90% Identity
- iTF_00682671;
- 80% Identity
- -