Etru025692.1
Basic Information
- Insect
- Eudonia truncicolella
- Gene Symbol
- -
- Assembly
- GCA_949315975.1
- Location
- OX438854.1:3338338-3347806[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 42 0.14 12 7.2 0.1 5 23 2 21 1 21 0.93 2 42 0.0023 0.2 12.8 0.6 1 23 26 49 26 49 0.96 3 42 0.021 1.9 9.8 0.4 2 23 55 77 55 77 0.95 4 42 0.012 1.1 10.5 0.9 1 13 81 93 81 95 0.90 5 42 0.93 81 4.6 0.5 1 23 128 150 128 150 0.95 6 42 0.037 3.2 9.0 0.3 2 23 178 200 177 200 0.94 7 42 0.89 77 4.7 2.0 1 23 220 243 220 243 0.95 8 42 7.1e-06 0.00062 20.7 4.5 1 23 248 270 248 271 0.96 9 42 0.00088 0.077 14.1 0.6 1 23 275 298 275 298 0.96 10 42 0.15 13 7.1 0.5 2 23 301 323 300 323 0.94 11 42 0.9 79 4.7 0.1 2 19 330 347 329 350 0.93 12 42 0.0034 0.3 12.3 1.9 1 23 404 427 404 427 0.94 13 42 0.57 49 5.3 0.1 2 23 456 478 455 478 0.95 14 42 0.00039 0.034 15.2 0.3 3 23 502 523 500 523 0.97 15 42 0.00055 0.048 14.8 0.2 3 23 530 551 529 551 0.93 16 42 0.00012 0.01 16.9 2.4 1 23 556 579 556 579 0.92 17 42 0.00021 0.018 16.1 0.4 2 23 585 607 585 607 0.95 18 42 0.00014 0.012 16.7 4.4 1 23 611 634 611 634 0.97 19 42 0.31 27 6.1 1.2 2 23 641 662 640 662 0.95 20 42 0.00074 0.064 14.4 2.2 1 23 707 729 707 729 0.95 21 42 0.79 69 4.8 0.0 2 23 757 779 756 779 0.89 22 42 0.024 2.1 9.6 0.1 2 23 800 822 799 822 0.95 23 42 0.00022 0.019 16.1 0.6 1 23 827 850 827 850 0.96 24 42 0.00081 0.07 14.3 1.0 1 23 855 878 855 878 0.96 25 42 0.00043 0.037 15.1 0.3 2 23 881 903 881 903 0.96 26 42 0.00027 0.023 15.8 1.1 1 23 986 1009 986 1009 0.95 27 42 1.3 1.1e+02 4.2 0.0 2 23 1082 1105 1081 1105 0.93 28 42 3.8e-05 0.0033 18.4 0.4 3 23 1112 1133 1111 1133 0.95 29 42 0.0096 0.83 10.9 5.9 2 23 1138 1160 1137 1160 0.94 30 42 0.0018 0.16 13.2 3.4 1 23 1165 1188 1165 1188 0.97 31 42 4.8e-05 0.0042 18.1 4.2 1 23 1192 1215 1192 1215 0.97 32 42 0.00081 0.07 14.3 0.5 2 23 1222 1243 1221 1243 0.96 33 42 0.48 41 5.5 0.8 1 23 1300 1322 1300 1322 0.94 34 42 0.15 13 7.1 0.0 2 23 1353 1375 1352 1375 0.94 35 42 0.0088 0.76 11.0 1.9 2 23 1398 1419 1398 1420 0.95 36 42 0.0057 0.49 11.6 1.5 1 23 1425 1448 1425 1448 0.95 37 42 0.035 3 9.1 0.5 1 23 1453 1476 1453 1476 0.93 38 42 0.0026 0.22 12.7 0.7 2 23 1482 1504 1481 1504 0.92 39 42 0.00039 0.034 15.2 0.1 2 23 1512 1534 1511 1534 0.97 40 42 0.18 16 6.9 0.1 2 23 1541 1562 1540 1562 0.95 41 42 3.9e-06 0.00034 21.5 0.9 1 23 1568 1590 1568 1590 0.95 42 42 3.5e-05 0.0031 18.5 4.9 1 23 1596 1619 1596 1619 0.97
Sequence Information
- Coding Sequence
- ATGTACTGTGGGAAACCGTTCAAAGCCATCACTAGTTTGAGAGTACATATATCGCTGAAGCATAATCCCGATGGgtataaatgtgaaatatgcAGCATGGAGTTCTCTACAGGGCACCTTCTGAGAGGCCATATGGGTAAAGTGCACGGTAAAAAGAAGGCGAAATGCCAAATATGTTCAGAGAAATTCACGTCTCCTTACATAATGAAGACTCATATGATGGAGGTCCATGAGAAAGGTTTTACGTGCGACCACTGCGGAAAAATGTTTACAAATGAATATGGGCCGGCAAAAGGGAAACATACTAGTAAAAAGAGGAGGCGAAATCTACAAACATTGTTCAACAACACCTCGATGATACCATTTAAATGGCGCAGCAAATTTATGTGCTTTTACTGCGGTGACGACATTGACGATTACAATGAGCTCAAAAAACATACGAAAGCTCACGGCGTCTGCTCGGACAGAGATAGAGCTATTAAACTCGTTAAATCTAAAGAGTCTGAAGTCAAAATTGATGTATCGAACATGACGTGTGAACTGTGCAATGAGTCTTTTAGCTATTTCGATGACATTGTTTCTCATTTGACGATGAAACACCAACTGCCTTATGATAAAGACTGTGACGTCAGTATCACGACATATCGCTTGGTCGATTTCAAATGCGTGTCCTGCGAAGAGAAATGTGTCAATTTTTCTAGACTAGTGAAGCACGTGAATCTTAGTCATCCTATCAATTGTTTCGTGTGCCACGATTGTGATCGAAAGTTTAACAAAAAGAGAGACCTTGAGTCCCACATTCGCATCCACCACAGAAAAGAATATAAATGTAAAAGGTGCCTCATGACTTTTCCTAATAATGCCGCTTTGCAGAAGCACAAAGCGCGCGCCCACGTTTCAATGTGCAATATTTGTTTTGAACCATTTACTTCGGATAGTAAGAAGTTGGATCACATGAAACAGGTGCATTTTGATAAAGACTTTCTAGAATGTGGTTTTTGCCAAAAAAGGCTGACTACGAAACTGGCACTCCTTAATCACGCGGGAAAATGCATTAAGCAGCAGTGCAAATCCGATATGCTAACTTATCCAGACCCTAAAAAGTTAGGCGTTAGCGATAAGAAGCCTTCTGTGTCGCAAATAAGAAGCAATATCGCTTGCATTGTCAATATGTCGACAGCATTaccatttaagtattttatgaataaattcaGATGTTTTTATTGTCCGAAAGATTTTATTGAATGTGACGATCTCAAGCAACACACCGTTATGGAGCATCCGTCCTGTAGTAGCAAATTAAAATCTTTACGACTTAGAAATAGGGAGCATGGCATTAAAGTGAAAATAGACATATCATCGTTATCATGCAAAATGTGCTTCGAACCGATGCAAGATTTGGACAATTTAATAAACCATTTGATTACTGAACACAAAGCTCAGTATGACAAGTCCGTCGACAACAATATGCAACCTTTCAAATTGATTAGGGATAATTTCGGATGCCCTTTCTGCGGTGAGGTGTACAGATACTTTAGCACTTTACTAAAGCATATCAGTACAAGTCACACGGAGAACAGAAACATATGTTCGTATTGCGGCATGTCTTTTAGAACCGATCCAAGTTTACGGGCCCACATCACGCTCAGGCATAAGCCCAACGGCCACAAGTGTAGCGTTTGCGACAAGGATTTCACAACAAAACATGCGTTACGTGACCATTTGGGTAATGCGCACGGTAGTAAGGTAGCCAAATGCCAAGTCTGCTCCGAAATGTTCACATCTCAGTACGCGATGCAGAGACACATGATTAACGTTCACGCCACTGGTCACAAGTGCTCGTACTGCGGCAAGATGTTCACGAAAAACTCCTTCATGGTCAATCATGTTCGTCGGACACACCTCAAAGAGAAAAATGTCGAGTGCTCTGTATGTTTCGAAAGGTTTTTCGATATACACCTCTTAAGAATGCATACCGTCAAGCATGTCGGCGAAAGGAATTTCCATTATGAAAAAGATCCAGCGCCTTACGAGGGATGTGCCTCTGAGCGCAGAAGAAGAAActtgaaaatattattcaacAACACTACAGTACTGCCATTCAAATGGCGCGGACGCTTCCTTTGTTTCTACTGCCCTAAAAACTTTTCGGAATATACAGAGTTGAGAAAGCACACCAGTACACATGGTTCGTGCTCCACTAAAGACTATTCCTTAAAAGTGATTAAAGGAAgccacattgaaattaaagttGACGTCTCCGATGTGTCTTGTGAGGTGTGCAATGAACCGTTTAGAGAATTAAATGAGATTATAGACCATCTGATCGGCAAACATAACATGGAGTATGATAAAACTGTCGAAATACCATTCCAGAGTTACAGGCTTGTCGATATGCGGTGTTTAGTTTGCGAGGAGAAGTTTTCATACTTCGGATATCTGATAAGTCATGTGAATGTTGCTCACCCTCAGAACTGTTTCATTTGTGACGACTGTGGAGTCACTTTCAACAAGAAAAGAGATTTGGCAGTTCACTTCAGGTATTACCATAGAAAGGGCGGGTATCCCTGCGATCAGTGTGTCAAGAACTTTGAGAGCTTCTATTTGTTGCGGAAACATCAGAACAATATCCATTTCAGAAAGTGTAAGAATTGTAATTTGCGTTTCGCATCGCTAGCTTTACTGCAGAAACACATTCTTATAGAACACCCTGATGATGGAAGCTTGAAGTGTGAGTTTTGCGCGAAGCAGTGCCATTCTCAGCAAGGCTTAATTCAACATAAGAGCAAGTGTAGAGTGAAGCTCATTATCTCTGTCGACGAACCGACTGACAAGTTTCTGCCAACGGAAAATAGTTCAGAGCCTAAGAAGAAGCAAAATGTGAAACAGATCAGACAAAACATACAGTGCGTCTTGAACATGTCAACGGCTGTGCCTTTTAAGTTCTTCTCCAAGTTCACTTGCTTTTATTGCTCGAAAAAGTTTGTCGATTTCGATGATCTACGAAATCATACTGCAGTAGAACACCCAGTTTGTGATTTGCAATCTAAATCGATGAGGAAATGTAAAGGTGAAAGAGTCAGTGTCAAAATAGATGTTAACTCATTGAGTTGTAAAGTCTGTTGCCAAAACATGGACAGTCTAAACAACCTCGTTGATCATTTGATCACTGATCACAAGGTCGATTACGACAAATCGGTTGTAGGTTGCTTGGAGCCATTCAGAATAATGAAGGACAGTATCCCCTGCCCCTTATGTCCTGATCGGGTGTTCAGATATTTTGGAATTTTACTCCGCCATATGAACTCTGAGCATAGCAACAACAATAGGATATGCGACTTTTGCGGGCGCAGTTTCAAAAACGTGGCTAATTTACGCGTCCACATGTCGTATACGCACACCGGTTCATGCGAATGTAGCATTTGCGGAGTTAAATTTAAGAACCAATGGTGTTTGGCGAGGCATCGTGCGAAATGTCACGACGCAAAAGACTACAAATGCCCAAAGTGTCCAGAGCAATTTCAGTCTCAATACCATAAACAGAAGCACTTGATTAAAATGCACAATATCGGGCACAAATGTGAGCAATGCGGGAAGATGTTTACAAGAAACTCGTTTATGAAGGATCATGTGAGGAGGACGCATTTGAAAGAGAAGAATGTCATGTGTTCCGTTTGCAATGAGAAGTTCTTTGATAACTACCTTTTGAGGATGCATATGGTGAAGCATGAAGGGGAGAGACGGTTTAGTTGCACAGTTTGTGGTGCAAAACTCGACACTGAAGAGGACAGAGATAAGAAATTGGAAGTGGCACATAAGCTACTGGTTAAACGGAGAAATATTGAATACGTACTACAATACAGCAACGTCACACCATTTCTGTGGTACAAGGGCAAATATAGATGCTTCTATTGTACAGAACATATGAAAGATCCTGTAGCACTACGCGAGCATACTGTTGAGCACGAGGAAGACAATTTAGAGTTGATTGTGCATGACAGAACTAAGAATAACAGGAATAAAGATGCGGCTGTCAAAATCGATGTCACTGATATAATGTGTAAGCTATGTCAACAAGGTGTGGCTAATTTGGAAGAGTTAATACACCATTTGATTATAGCTCACGATGCTGAGTATGATGTGAGCGTGCCTAACTGTGTGCTCCCATTCAAGTTGGACAAAGATCAGCCAACATGCCCGACTTGTGAtatgaaatttgtattttttgaatATCTGTTGCGGCATGCTAATAAACACCATCTGTCTCACCATTATATTTGCGATGTTTGTGGCACTAGTTTTCAAGGAGAGAATCATTTGAAAATGCACAATAGATACTACCACAGGCACGGAGGGTATAAATGCGACTACTGTGGAGTCAGCTTAACAACGCTATCCAAGAAAATACTACATGAAAAGAATGTACACTTAGTGAACTTATCTACGTGTCCACATTGCCCTGAGACGTTTAAGAGTCCCTATCTCAAGAAATTGCATTTGGCAAATGTCCATGGCGTGGAAGAGCTGAAAATCAAATGTCCGTACTGTCCTAAAGTATACCCTCAAGAGAGCATAATGTCGAGACATATGAGGCGTGTACATTTGAGAGAGAAAAATGTGGAATGCAAAGTTTGTGGAGACAAGTTCTTTGGTCCCTATGACGTGAAGCTCCATATGGTAAAACATAATGGCGAGAAGAAGTTCATATGCAGCGTCTGTGGCAAGAAGTTTACCAAAAAGAGCAACTTGAATTCCCATTCTGCGGTGCATACTGGGGACAGACGTTTCACTTGCGAGCATTGTAACAAATCGTTTGCTCAGCGGACTTATTATAAAACGCACATGAAAAATATTCATGGCGCTGATAATGAGGCTAATATTGTTGTGCGTGATGATATTGAGCTCGATGACGCTCAAATGGAAGCTCAGTATATTGGAGACGAATATGACAGTGTAGAATTGTCTGGACAATGA
- Protein Sequence
- MYCGKPFKAITSLRVHISLKHNPDGYKCEICSMEFSTGHLLRGHMGKVHGKKKAKCQICSEKFTSPYIMKTHMMEVHEKGFTCDHCGKMFTNEYGPAKGKHTSKKRRRNLQTLFNNTSMIPFKWRSKFMCFYCGDDIDDYNELKKHTKAHGVCSDRDRAIKLVKSKESEVKIDVSNMTCELCNESFSYFDDIVSHLTMKHQLPYDKDCDVSITTYRLVDFKCVSCEEKCVNFSRLVKHVNLSHPINCFVCHDCDRKFNKKRDLESHIRIHHRKEYKCKRCLMTFPNNAALQKHKARAHVSMCNICFEPFTSDSKKLDHMKQVHFDKDFLECGFCQKRLTTKLALLNHAGKCIKQQCKSDMLTYPDPKKLGVSDKKPSVSQIRSNIACIVNMSTALPFKYFMNKFRCFYCPKDFIECDDLKQHTVMEHPSCSSKLKSLRLRNREHGIKVKIDISSLSCKMCFEPMQDLDNLINHLITEHKAQYDKSVDNNMQPFKLIRDNFGCPFCGEVYRYFSTLLKHISTSHTENRNICSYCGMSFRTDPSLRAHITLRHKPNGHKCSVCDKDFTTKHALRDHLGNAHGSKVAKCQVCSEMFTSQYAMQRHMINVHATGHKCSYCGKMFTKNSFMVNHVRRTHLKEKNVECSVCFERFFDIHLLRMHTVKHVGERNFHYEKDPAPYEGCASERRRRNLKILFNNTTVLPFKWRGRFLCFYCPKNFSEYTELRKHTSTHGSCSTKDYSLKVIKGSHIEIKVDVSDVSCEVCNEPFRELNEIIDHLIGKHNMEYDKTVEIPFQSYRLVDMRCLVCEEKFSYFGYLISHVNVAHPQNCFICDDCGVTFNKKRDLAVHFRYYHRKGGYPCDQCVKNFESFYLLRKHQNNIHFRKCKNCNLRFASLALLQKHILIEHPDDGSLKCEFCAKQCHSQQGLIQHKSKCRVKLIISVDEPTDKFLPTENSSEPKKKQNVKQIRQNIQCVLNMSTAVPFKFFSKFTCFYCSKKFVDFDDLRNHTAVEHPVCDLQSKSMRKCKGERVSVKIDVNSLSCKVCCQNMDSLNNLVDHLITDHKVDYDKSVVGCLEPFRIMKDSIPCPLCPDRVFRYFGILLRHMNSEHSNNNRICDFCGRSFKNVANLRVHMSYTHTGSCECSICGVKFKNQWCLARHRAKCHDAKDYKCPKCPEQFQSQYHKQKHLIKMHNIGHKCEQCGKMFTRNSFMKDHVRRTHLKEKNVMCSVCNEKFFDNYLLRMHMVKHEGERRFSCTVCGAKLDTEEDRDKKLEVAHKLLVKRRNIEYVLQYSNVTPFLWYKGKYRCFYCTEHMKDPVALREHTVEHEEDNLELIVHDRTKNNRNKDAAVKIDVTDIMCKLCQQGVANLEELIHHLIIAHDAEYDVSVPNCVLPFKLDKDQPTCPTCDMKFVFFEYLLRHANKHHLSHHYICDVCGTSFQGENHLKMHNRYYHRHGGYKCDYCGVSLTTLSKKILHEKNVHLVNLSTCPHCPETFKSPYLKKLHLANVHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECKVCGDKFFGPYDVKLHMVKHNGEKKFICSVCGKKFTKKSNLNSHSAVHTGDRRFTCEHCNKSFAQRTYYKTHMKNIHGADNEANIVVRDDIELDDAQMEAQYIGDEYDSVELSGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00035924;
- 90% Identity
- -
- 80% Identity
- -