Etru003880.2
Basic Information
- Insect
- Eudonia truncicolella
- Gene Symbol
- PAXBP1
- Assembly
- GCA_949315975.1
- Location
- OX438827.1:18218139-18229431[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00049 4.6 7.4 0.0 7 40 59 92 54 99 0.90 2 2 2.2e-14 2e-10 41.4 0.1 13 190 156 311 151 316 0.72
Sequence Information
- Coding Sequence
- ATGCCGCTGCCGGCGACAGCATCGCGGCGATCGGCTCCGTGCCCGCCGAGGAGGGGCGCGCACACACGGCGTAGACGAACAACGGCGGACCGACGGCAGTCGATCCGCACGCTGAGCGCGCAGGTGTTCGCGGACACGCTGCCGGCGTGGCGCAGCGCGCGCGGCGTGTGCGGCCGCCTGGCGCGCTGGCGCCGCCGCGAGCCCGCGCTCTACGCCGACGCCTACTTGGCCGCCTGCCTGCCCCGCCTGCTGGCGCCCTACGCCCGCCACCAGGTCAGTGCCAACTCAGCAGCCCGCGCTCTACGCCGACGCCTACGTGCCCGCCTGCCTGCCCCGCCTGCTGGCGCCCTACGCCCGCCACCAGGTCAGTGCCAACTCAGCAGCCCGCGCTCTACGCCGACGCCTACGTGCCCGCCTGCCTGCCCCGCCTGCTGGCGCCCTACGCCCGCCACCAGGTCAGTGCCAACTCAGCAGCCCGCGCTCTACGCCGACGCCTACGTGGCCGCCTGCCTGCCCCGCCTGCTGGCGCCCTACGCCCGCCACCAGTTAATCTTATGGAACCCCTTAGCAGATGAAGACAATGAAGACTATGAGAAAATGGACTGGTACAAATGCCTGATGATGTACGGTGTGCGCCACGAGCGCGGCTCCAGCTCGTCGTCGGAGTCGTCGTCGGGCGAGGAGCCGCCGCCGCTGAGCGAGGAGGCGGTGCGCGCCGACCCCGACCTGGGGCTGGTGCCCGCCATCGTGTGCCGTGTCGTCATGCCCAAGCTCACCGAGTTGGTGGAGCAGGCGTGGGATCCGCTATGCGTGCGCGCGTGCGTGCGCCTGCGCCAGCTGCTGCTGCGGTTCGCGGCGCTGCCGGGCGCGGCCGCCGCGCTGCGCCCGCTCGCCGCCGCCGTGCGCGCGCGCCTCGCCGCCGCGCTCCACGCGGACGTGTTcctgccgccgctgccgccgcaCGTGGTGGAGGGCGCGGGCGGGCAGTTCTGGCGGCGCTGCCTGGGCGGCGGCGTGCGGCTGCTGCGCGCGGCGCTGGCGCTGGCGGCGCCGCCCGCGCTGCTGCGGGCCGACTCGCTCGTCATGGCGCTGCTGGAGACGCTGTGctgcgcggcgggcgcggcgccgggcgcggcggcggcggcggcggcggcggcgctggccGACACGGTGCCGCGCTCGGGCCGGCTGCGGGCCGCCGCGCTCGCGCGCCTCGCGCAGCTGGCCACGCTCGCGCTCTCGCGGCTGCAGCCCGACAACCCGCTGCATCTaAAAGCGCTGGAGCAAGCCAGAGCCGTGATAGCGGAGGCGCGCGCGGCGGAATGA
- Protein Sequence
- MPLPATASRRSAPCPPRRGAHTRRRRTTADRRQSIRTLSAQVFADTLPAWRSARGVCGRLARWRRREPALYADAYLAACLPRLLAPYARHQVSANSAARALRRRLRARLPAPPAGALRPPPGQCQLSSPRSTPTPTCPPACPACWRPTPATRSVPTQQPALYADAYVAACLPRLLAPYARHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRHERGSSSSSESSSGEEPPPLSEEAVRADPDLGLVPAIVCRVVMPKLTELVEQAWDPLCVRACVRLRQLLLRFAALPGAAAALRPLAAAVRARLAAALHADVFLPPLPPHVVEGAGGQFWRRCLGGGVRLLRAALALAAPPALLRADSLVMALLETLCCAAGAAPGAAAAAAAAALADTVPRSGRLRAAALARLAQLATLALSRLQPDNPLHLKALEQARAVIAEARAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -