Basic Information

Insect: Eudonia truncicolella
Gene Symbol: -
Assembly: GCA_949315975.1
Location: OX438852.1:3289746-3292751[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 8.5e-10 6.7e-07 29.6 0.0 2 39 16 53 15 57 0.91

2 2 8.7 6.9e+03 -2.5 0.0 28 34 455 461 454 464 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	8.5e-10	6.7e-07	29.6	0.0	2	39	16	53	15	57	0.91
2	2	8.7	6.9e+03	-2.5	0.0	28	34	455	461	454	464	0.83

Sequence Information

Coding Sequence: ATGCCTCGGAATTATGAGAGAAGATCATCGCGTGCTTCATACTCTCAAGATGACTTACAAGCCGCCATAGAAAAGGTGAAAAGCAATGAGCTATCTAACTATGCAGCTTCGCAAATATATGGAATTCCTAAATCCACACTTAATGACAGAGTTAGGAATAAATCTGGTGTAATCAGTCAAACCTTGGGACGGCCACTAGCAATTCCCCTAGCATTGGAATCGGAGCTCGCGTCTTGTCTTCGCACTCTTGAAAAATGGGGATGGGGATTGTCACGTGACGAAGTGCAGGAGATAACTGCAgaattcattaaaaagaataaattaaaaacaccaTTTGCAGATGGGAAACCTGGCGCTGATTGGTTCATCTCTTTTAGGAAGCGCCACTGTTTATCAATTAAGAAGCCGCAACCAGTCGAATATCTACGAAAGAGAATGACTGATCCCTTTGTGGTGTACGATTACTTCAAAAAATTGGATGAAGTATTAAAAGAGCTTAATCTTGGGTCATTGCCAGACAGGATCTGGAATTTAGATGAGACCTCGGTCTGTCTAGATCCAACGAAGACAAAAGTAGTTGGTGCAGTAGGCAAACCATGCACAAGAACCATCGCTGGTAGCGCCAAAGAAAACATTACAGTATTAACTACAGTCAACGCAGCTGGCAAAAAATTGACTcctttaataatatacaaaggCAAACACGTTTATGATGAATGGATGGCGGAGGACAAACAGGAGTATGATTTTGACATATCTTATGCAGCCAGTAATCGCGGCTGGATGGAAACGGAGATCTTTTATAACTACATGTTAAAAATCCTTATTCCCAGTTTGGGACCAGAACGACCCGTTCTGATTATTTATGATGGGCATAGCACCCATGTTGACAGCAAGGTTGTATCTTTGGCCATAGACAACAATGTGACTATACTGAAATTGCCAGCGCATACATCACACTTGCTCCAGCCGTTAGATTTAGCGGTATTTAAGTCTTTGAAGACCATGTGGGACAAAAAGCTTGTTAAATTTCAACGACAAAACGTCGGTGTCAAATTACGCAAAAAGGCTTTTGCTGAAATGTTTGCGGAAACATGGAATCAAACAAGTCCGAAAGTGATACAAAGCGGCTTCAAAAAAGGAGGCATTTATCCGTTTGACGCCGATGTAATCCCAGAGGAAAAATTTGACCCAACAGCTTTAAACAGATGGAAGATTTATGGAGCAAAAAAGGAGATAAAGCCCCTCAAACCACTTAAGCAGCTATGCTTAGAGACTATAAACAACGTTATGTTTTTCCCGACAGCAGCCTATACAATTCAGAGTGTTGCCTATTGTGACGCTGAACATCCTGATCCATCGGTACCAAAAAGTACGTTTGAGGAATTACTTTTACAGACGCTTAAATATCATCCCCAAACCACAAACAAAGTAACACGAAAACGTGTTGCATCCGGAGCTGAAGTTATCACACGCCAGATTTTGGAAAACAAGAAAAACGAACAGCATAAGACATCCAAAGAAACATTGCAACAGCTGAAAACAAAGTCAaccaaaatcaaacaaaattcaaaaagttCTCTGAGTGGCACTGCAGTTCAAGTTAAAGTTGATTTGATGGACAAGAATATAGATGATTCTAGAAAAATTGGACAAAACAAAAGGAAAGTCAAAACTGAGACGGAACctcgaaaaaaaattaaaacgtgtTCGAGTACCTTAACTTCCATCAGCGAACAAATAAATTTTCAGAGCGATTCTGATGTCTTAGAAGACTGCGAAAATTTTTCAGAATTTGATCTATTTAAGTGGATTGAGGATGATGATGCACGTGATATGGATGGATTATTGCGAAAATCAATCAAAAAGTCACAAAAAGATTTGAATAAAGATTTGCAGTTTGATTTGATACAAATGGAATCGGAGATGAAAAACGATCTACAAGAACAGAAGATTAAAAACGTTTGGAATTTAGACACAGGACATAAACATGAAGACGAACATAGTGATATGATAGATATTGTGGATGATCAAACAGGATTTCTGCGAAAAGTGACAGTTACTAAGGCGATAGTAGAGAAACCAAAGCCATCAAAGGACTCCGTAAGTTGCAAATATCtcgaaaaatataaagaaaatgttgCTGATATCGTTAACCACCGAAACCGTAACGAAATACAGTCatataccaaaaaaaatgtaaagaaacgaacaagtacaaaacctaaaaaaaagaagatattgCGTAGTAGCTCTACAACTACGGACGAAGATATTATGAGCGTTCATACTGATAGCGACATATGTGACGTAATATCGATTCAAAACGAGGAAGAAGATGAAAATGTAATAGTAGTAGTACCGACTCAATATGAAGAAAACGATAAAGATTTATTCAGAAAATCTATTGATGAAAAAGAAGCTGCTATATTtgcaaaaatttatgaaatcgACAACATTGAAAAACAAACACTTATTGACAAAGAGAAACCAAAAACTAGGAAGAAAAGAGATGTACAAAAACTAGAAAGGCAAATAGTGACTCGGCAGACTAATAAAAAGCagaaaaagaatgaaaaaaaagaaaacgaagCAATGTTTGTTGATTAA
Protein Sequence: MPRNYERRSSRASYSQDDLQAAIEKVKSNELSNYAASQIYGIPKSTLNDRVRNKSGVISQTLGRPLAIPLALESELASCLRTLEKWGWGLSRDEVQEITAEFIKKNKLKTPFADGKPGADWFISFRKRHCLSIKKPQPVEYLRKRMTDPFVVYDYFKKLDEVLKELNLGSLPDRIWNLDETSVCLDPTKTKVVGAVGKPCTRTIAGSAKENITVLTTVNAAGKKLTPLIIYKGKHVYDEWMAEDKQEYDFDISYAASNRGWMETEIFYNYMLKILIPSLGPERPVLIIYDGHSTHVDSKVVSLAIDNNVTILKLPAHTSHLLQPLDLAVFKSLKTMWDKKLVKFQRQNVGVKLRKKAFAEMFAETWNQTSPKVIQSGFKKGGIYPFDADVIPEEKFDPTALNRWKIYGAKKEIKPLKPLKQLCLETINNVMFFPTAAYTIQSVAYCDAEHPDPSVPKSTFEELLLQTLKYHPQTTNKVTRKRVASGAEVITRQILENKKNEQHKTSKETLQQLKTKSTKIKQNSKSSLSGTAVQVKVDLMDKNIDDSRKIGQNKRKVKTETEPRKKIKTCSSTLTSISEQINFQSDSDVLEDCENFSEFDLFKWIEDDDARDMDGLLRKSIKKSQKDLNKDLQFDLIQMESEMKNDLQEQKIKNVWNLDTGHKHEDEHSDMIDIVDDQTGFLRKVTVTKAIVEKPKPSKDSVSCKYLEKYKENVADIVNHRNRNEIQSYTKKNVKKRTSTKPKKKKILRSSSTTTDEDIMSVHTDSDICDVISIQNEEEDENVIVVVPTQYEENDKDLFRKSIDEKEAAIFAKIYEIDNIEKQTLIDKEKPKTRKKRDVQKLERQIVTRQTNKKQKKNEKKENEAMFVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01334736; iTF_00682323;
90% Identity: iTF_01334741;
80% Identity: -