Etru000271.1
Basic Information
- Insect
- Eudonia truncicolella
- Gene Symbol
- -
- Assembly
- GCA_949315975.1
- Location
- OX438825.1:2503767-2504285[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-10 1.2e-07 32.0 0.0 4 35 32 64 30 69 0.93
Sequence Information
- Coding Sequence
- ATGGCTGAGAATTTTACGTTAGCATTGTCGCTTTTATCTATAGAATTCCACGGTCATGCCCTCAAGTTGAAAGCACCAACATGGAATCAAAATCAACTTCAAGAGGCGATACAGGCGGTCGTCACCCAGAAGATGCGGTTCACTCAGGCGTCGACGCACTTTGGAATACCAAAAGGAACATTGTACGATAACATTTTAGGGAAATCGAAGAGAATGGCAGTTCTAGATGAAGCGGCCTTGTCGGCCAGCGAGGAGAGGGCCGTGTTGGACTTCTGTTGCGAAACTAGTGTTTCACCATACAATAGGAGAACTAAAAAGTCCTTGGCCGAAGTTTGCTCGTACGTGCAAAAACTTAGAAGGTGCCGAGATCCTGGTTTCGCATTCATAGGTCTGACAGGGTTCCGATGGTGGTGGGCCTTTTGTAAGAAGCATTCGATTGTATCACTCTTCTATGAAGGGTCAAGTAAATCCAGAAGTACTAAAATCAAGTCGGAACACACTACTGACGACGAATCCTGA
- Protein Sequence
- MAENFTLALSLLSIEFHGHALKLKAPTWNQNQLQEAIQAVVTQKMRFTQASTHFGIPKGTLYDNILGKSKRMAVLDEAALSASEERAVLDFCCETSVSPYNRRTKKSLAEVCSYVQKLRRCRDPGFAFIGLTGFRWWWAFCKKHSIVSLFYEGSSKSRSTKIKSEHTTDDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025190;
- 90% Identity
- iTF_00682312; iTF_01334722;
- 80% Identity
- -