Emer037353.1
Basic Information
- Insect
- Eudonia mercurella
- Gene Symbol
- ZNF219
- Assembly
- GCA_963082485.1
- Location
- OY720050.1:8011679-8026105[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4e-05 0.0016 19.9 0.6 3 23 215 236 213 236 0.96 2 15 0.0009 0.1 14.3 2.2 1 23 243 265 243 265 0.97 3 15 3.6 4.1e+02 2.9 2.3 1 23 269 291 269 292 0.89 4 15 0.00027 0.031 15.9 6.9 1 23 296 318 296 319 0.95 5 15 1.7 1.9e+02 4.0 0.2 3 23 326 347 326 347 0.84 6 15 0.32 37 6.2 0.1 1 19 355 373 355 376 0.93 7 15 1.4 1.6e+02 4.2 5.6 1 23 381 403 381 404 0.92 8 15 0.0044 0.5 12.1 0.1 1 19 413 431 413 433 0.96 9 15 1.5 1.7e+02 4.1 1.5 5 23 447 466 438 466 0.89 10 15 0.002 0.23 13.2 2.9 1 23 471 494 471 494 0.96 11 15 0.0019 0.21 13.3 0.2 2 23 538 559 538 559 0.97 12 15 0.0024 0.27 12.9 3.6 1 23 565 587 565 587 0.98 13 15 1.8e-06 0.00021 22.7 0.6 1 23 593 615 593 615 0.98 14 15 0.00011 0.013 17.1 2.0 1 23 621 644 621 644 0.95 15 15 1.3 1.5e+02 4.4 0.3 1 23 665 688 665 688 0.91
Sequence Information
- Coding Sequence
- ATGTCTCAAGCGGCCTTAGCATGCCGCGGTTGTCTTGCAACAGACACAAAACTATTCGACTTTACCGAAAACAAATTGAAAGAATCTTTCATGGAACTCATAGGGTGTCcgGAGATGGAGTCTGTGAGGATGCCGCAATATCTGTGCTACTACTGCAATGCGCTCCTGATCAAGTGTGTAATGTTTAGAGACAGATGTCTGCGGTCTCAGGCTGTTCTTGAGCTGATTGATGAGTCTGATttaaCAACGGCCTACATAGGGTCAGTGGATCGCGACCACTACAATTTAAATCTCAACCTTTCTATATCGAACCCTGTAATCATCGACAGCGACTTAACAGAAGAAGAAATGCCAATCGAAACACTAGAAGACGTCCCAGAAGAGTTTGCTTACGAAGAGTATCTAGAAGATGAAGTAAAGTTAGAAGATGACTATGATACATTAGAACTGGCTGACTTTGAATACGATGACATGACTACGGCTAATAACGACGATTTATCATCTGgggagaaaaagaaaaaacctttTAGCGTTCACGACTTTGAAAACCGCTATAATGTGACTATTAATGTACTGACTAAGGAGCAACAGATACTAGAAGTGTATGAAAGGAAGGAATTGTCTAAGAAGTCTGAGTTTGGTTGTAACGAGTGTGGTAAAACCTTTATCAACGCTGACAAGCTAAGGAACCACTTTATGATGTCTCATGACCCTAATATTGGACATTTCATGTGTGAGTTATGTAATAATAAGTATGAGAACCGTTCGAAGTTGAGACGACATATCTTCTCACACAAGTACAGGTTCAATTGTAATGATTGCCCGTTCAACACGATGCGGTTGAGTTCATCCAAGAATCATTACTTCCGACATCAGGGCGTTCAGTTCTGCTGCGACAAATGTGGCAAGAGTTTCAGTATGAACACTTCGTACTTGTCCCATTTGAGGAAGCATCATCCGTCGAAGTATAGCTGGTGTCGGTACTGCGGGGAATCCTTTTTAGgtgATATAGGTCTCCGCAACCACAAAAAGATAATTCACTACGACGTTATCAACAGTAAGCATATTTGCCAGACTTGTGAGATGCCTTTTGTGAGCGATGAAGCGCTCCAAACTCACAATGGTACCAACTGCTCGGAACACGCCTGCTTCGAATGTGGCAACAGCTTCGAAGACAAACAGTTCCTACGCTGCCATCTCATCAGCCATCATAAGAAGTCGTCGAGCAGCAAATCCTTCAAGTGCGGTGTCTGTGATGTTGTGTTTGAGAATGCGAAAAGTTTGAATTATCATTTTGTGTGGAGTAAGGGACAGTGCTATGGTCTCCGTTTCTGTATAAAGTGTGGTGTGCATTGTGCTACCGAAGCTGATCTGGTGGAGCATATGACGAATGTGCATGAGGATAAGAAGTTCGAATGTGTTAAGTGCCATCGTACCTTCCCCAACACAACCAAACTTAACTTACACACCAAGCAAGCGCACAAACGCAAGAAGGGCGAAACCCGGCGGTTAGTTGGCACCCGCCAGTGGCGGGTCCTCAATACGGCGGGGGGGGACGTCATCGCGGGGGAGGGGGGCTTCATAAAGCAGGAGCAGCGGGGGGAAAAGAACGTCTGCGAGTTCTGTGGGAAGCCTTGTCCGAACATAATCGCCCTGAAAATCCACAGGCGCGTCCACACCGGCGAGAGGCCGTACAAGTGTCCGATTTGTGCCAAATGCTTCACCACGGAACTGTTGTGCACGCAACACATTCGGGTCCATACCGGGGAACGCCCTTACAAGTGCTTGTACTGCCCCAAGACCTTCAAAAGCAAACCTGCGGTCAACAGGCATATGCTGATCCACACCGGCGAACGGAAGCACATATGCACGCTTTGCAACAAGGCGTTCAGAACGTCCACCGACGTGAAGACGCACATCAAGTACGTCCACATGAAAGTGCCTGCGCAGCCCCGCGAGAGGAAAGCGAgggtcCCGAAGGACGAACGTAAACATATTTGCATGATATGCAATGAAGCCTTCCTTACTTCGACTGAAGCTAAACTTCATGTGAAACAGGCACACATGACAGCTCCACCCTTGCCAGTCGTGGTCAGTAGTGTAGATTGA
- Protein Sequence
- MSQAALACRGCLATDTKLFDFTENKLKESFMELIGCPEMESVRMPQYLCYYCNALLIKCVMFRDRCLRSQAVLELIDESDLTTAYIGSVDRDHYNLNLNLSISNPVIIDSDLTEEEMPIETLEDVPEEFAYEEYLEDEVKLEDDYDTLELADFEYDDMTTANNDDLSSGEKKKKPFSVHDFENRYNVTINVLTKEQQILEVYERKELSKKSEFGCNECGKTFINADKLRNHFMMSHDPNIGHFMCELCNNKYENRSKLRRHIFSHKYRFNCNDCPFNTMRLSSSKNHYFRHQGVQFCCDKCGKSFSMNTSYLSHLRKHHPSKYSWCRYCGESFLGDIGLRNHKKIIHYDVINSKHICQTCEMPFVSDEALQTHNGTNCSEHACFECGNSFEDKQFLRCHLISHHKKSSSSKSFKCGVCDVVFENAKSLNYHFVWSKGQCYGLRFCIKCGVHCATEADLVEHMTNVHEDKKFECVKCHRTFPNTTKLNLHTKQAHKRKKGETRRLVGTRQWRVLNTAGGDVIAGEGGFIKQEQRGEKNVCEFCGKPCPNIIALKIHRRVHTGERPYKCPICAKCFTTELLCTQHIRVHTGERPYKCLYCPKTFKSKPAVNRHMLIHTGERKHICTLCNKAFRTSTDVKTHIKYVHMKVPAQPRERKARVPKDERKHICMICNEAFLTSTEAKLHVKQAHMTAPPLPVVVSSVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00681849;
- 90% Identity
- iTF_00683631;
- 80% Identity
- -