Elac003530.1
Basic Information
- Insect
- Eudonia lacustrata
- Gene Symbol
- ZNF219
- Assembly
- GCA_947562085.1
- Location
- OX387333.1:2348836-2371010[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00051 0.066 14.5 0.7 3 23 101 122 99 122 0.96 2 14 0.58 74 4.9 2.1 1 23 138 160 138 160 0.94 3 14 6.1e-05 0.0078 17.5 5.1 1 23 165 187 165 188 0.95 4 14 0.11 14 7.2 0.7 3 23 195 216 195 216 0.96 5 14 0.078 10 7.7 0.1 1 19 224 242 224 245 0.94 6 14 0.16 21 6.7 5.7 1 23 250 272 250 273 0.93 7 14 0.025 3.3 9.2 0.1 1 19 282 300 282 302 0.95 8 14 1.5 1.9e+02 3.7 1.7 5 23 316 335 307 335 0.89 9 14 0.00016 0.02 16.2 0.9 1 23 340 363 340 363 0.94 10 14 0.00073 0.094 14.1 0.2 2 23 407 428 407 428 0.97 11 14 0.0013 0.17 13.2 3.6 1 23 434 456 434 456 0.98 12 14 1e-06 0.00013 23.0 0.6 1 23 462 484 462 484 0.98 13 14 6.2e-05 0.0081 17.4 2.0 1 23 490 513 490 513 0.95 14 14 0.078 10 7.7 0.3 1 23 543 566 543 566 0.95
Sequence Information
- Coding Sequence
- ATGCCAATCGAAACACTAGAAGACATCCCAGAAAAGTTTGCTTACGAAGAGTATCTAGAAGATGAAGTAAAGTTAGAAGATGACTACGATACATTAGAACAGGCTGACTTCGAAGACGATGACATGACTACGGTTAATGACGACGATTTATCACCTAGAGAGAAAATGAAAAAGAAAAAACCTTTTAGCGTTCATGACTTTGAAAACCGTTATAATGTGACTATTAATGTACTGACTAAGCAGCAACAGATACTAGAAGTGTATGAAAGGAAGGAATTGTCTAAGAAGTCTCAGTTTGGTTGTAACGATTGTGGTAAAACCTTTTTGAACGCTGAAAAGCTAAGGAACCACTTTATGATGTCTCATGACCCTAATATTGGACGTTTCATGTGTGAGTTATGTACCAATAAGTTCAATTGTAACGATTGCCCGTTCACCACGATGCGGTTGAGTTCATCCAAGAATCATTACTTCAGACATCAGGGCGTTCAGTTCTTCTGCGAAAAATGTGGCAAGAGTTTCCGTATGAACACTTCGTACTTGTCCCATTTGAGAAAGCATCATCCGTCGAAGTATAGCTGGTGTCGGTACTGCGGGGAATCCTTTTTAGGTGAAACAGGTCTCCGCAACCACAAAAAGATGACTCACTACGACGTTTTAAACAGTAAGCACGTTTGCCAGACTTGTCAGATGCCTTTCGTGAGCGATGAAGCGCTTCAAACTCACAATGGTACCAGCTGCTCAGAACACTCCTGCTTTGAATGTGGCATCAGCTTCGAAGACAAACAGTTCCTACGCTGCCATCTCATCAGTCATCATAAGAAGTCGTATAGCAGCAAATCCTTCCAGTGTGGTGTCTGTGATGTTGTGTTTGAGAATGGAAAAAGTTTAAATTATCATTTTGAATGGAGTAATGGACAGTGCTATGGTCTGCGTTTCTGTATAAAGTGTGGTGCGCATTGTGCTAGCGAAGCTGATCTGGTGGAGCATATGACGAATATGCATGTAGATAAGAAGTTTGAATGTGTTGAGTGCCAACGTACCTTCCCCAACTCATACAAACTTAACTCACACAACAAGCAAGCGCACAAACGCAAGAAGGGCGATACCCGGCGGTTAGTCGGCACCCGCCAGTGGCGGGTCCTCAACACGGCGGGGGGGGACGTCATCGCGGGGGAAGGGGGCGTCATAAAGCAGGAGCAGAAGGGGGAGAAGAACGTCTGCGAGTTCTGTGGGAAGGCCTGTCCGAACGTTATCGCTCTGAAGATCCATAGGCGGGTCCACACCGGCGAGAGACCGTACAAGTGCCCGATCTGTGCCAAATGCTTCACCACGGAACTGTTATGCACGCAACACATTCGGGTCCATACTGGGGAACGCCCCTACAAGTGCTTGTACTGCCCCAAGACCTTCAAAAGCAAACCTGCGGTCAACAGGCATATGCTGATCCATACCGGCGAACGGAAGCACATATGCACGCTTTGCAACAAGGCGTTTAGAACGTCCACTGACGTGAAGACGCACATTAAGTACGTCCACATGAAAGTGCCTGCGCCGCCCCGGGACAGGAAAGCGCCTGCGCAGCCCCGGGAGAGGAAAGCGGGGATCCCGAAGGACGAACGTAAACACATTTGCATGATATGCAATGAAGCCTTCCTAACTTCGGTTGAAGCTAAACGTCACGTGAAACGAGCACACATGACAGCTCCACCCTTGCCAATCGTGGTCGGTAGCGTAGATTGA
- Protein Sequence
- MPIETLEDIPEKFAYEEYLEDEVKLEDDYDTLEQADFEDDDMTTVNDDDLSPREKMKKKKPFSVHDFENRYNVTINVLTKQQQILEVYERKELSKKSQFGCNDCGKTFLNAEKLRNHFMMSHDPNIGRFMCELCTNKFNCNDCPFTTMRLSSSKNHYFRHQGVQFFCEKCGKSFRMNTSYLSHLRKHHPSKYSWCRYCGESFLGETGLRNHKKMTHYDVLNSKHVCQTCQMPFVSDEALQTHNGTSCSEHSCFECGISFEDKQFLRCHLISHHKKSYSSKSFQCGVCDVVFENGKSLNYHFEWSNGQCYGLRFCIKCGAHCASEADLVEHMTNMHVDKKFECVECQRTFPNSYKLNSHNKQAHKRKKGDTRRLVGTRQWRVLNTAGGDVIAGEGGVIKQEQKGEKNVCEFCGKACPNVIALKIHRRVHTGERPYKCPICAKCFTTELLCTQHIRVHTGERPYKCLYCPKTFKSKPAVNRHMLIHTGERKHICTLCNKAFRTSTDVKTHIKYVHMKVPAPPRDRKAPAQPRERKAGIPKDERKHICMICNEAFLTSVEAKRHVKRAHMTAPPLPIVVGSVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00683631; iTF_00682754;
- 90% Identity
- -
- 80% Identity
- -