Emer010381.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudonia mercurella
Gene Symbol
MBD-R2
Assembly
GCA_963082485.1
Location
OY720025.1:5178547-5192569[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6 2.6e+04 -3.9 0.0 45 73 66 90 66 92 0.74
2 2 2.4e-11 1.7e-07 32.0 0.0 4 60 734 790 731 822 0.90

Sequence Information

Coding Sequence
ATGgcagtaaaaaaatgttgtgttCCGAAGTGTAGTTCATGTTCAGCAAGAAACGAAGACATAGGTGTTTCATATCACAAGTTTCCTAAAGACATTTCCTTGCACAAAATTTGGACTAAAATAACATGTCTGAAACTAACTAGTACCAATACAACTGCTTATGTGTGTTCAAGACATTTCTGTAAAAGCGATTTCCAAATTAACGAGGACtcaaattatttacttaagtcAGATGCAGTACCATCAATATTTCCTTGGAAAGTTAAAATGGATAAATCAAAAATGGAGACCACAGAAGTAGAAAGTAAAGAATTAAATAGCTGTAAAGATTTGGATGGAGATAATCTTGAAGACATAAAGAAATTTATAGAGGATGAAGGAAATAAACTTCAAGATCTACCTTCCACTTCCGATGAGAAGGATGAAGTTGAAATGAATCAAAAAGTTAGTGAAGCTGATGGGAGTCAGGATTTTGATGAGCGGTTGGCTGTAGCTTCAAGCATGATGGACATGATACTGAGCGAATCGGAGGAACAACTAGCtaaaaatagaaatgagaagtcatcaaccaaacaaacaaaccaaggAGAAAAAGgcAACAGTAGTATGGCTCTATCAGTTGGATCAAAAGTAGAGGCTAGAGACTTTGGGGAGTATTGGTATCCTGCTAAAATTACAGAAGTTGATTATGAAGAGATGGAAGTTCTCGTTCATTATGAAAATGCATCTAAAAAGCATGATGAATGGATCTCCGTAAATAGTCCCAGGTTACGACCGTTAGCGGATCCCCTTAAGCCATCTACTCCAGTGCCAGAGCCGGAACCTGCCCCAGGCCCATCAATTCCAAAGGGAGATATTGCCCCTGCAattaagaaagaaataaaggaAGAACCAAGGATGTCTACTGAGGAAAAACCAAGACTGCTTTATAAAGTGGGAGAGAGATGCCTGGCCCGCTGGAGGGATAACAGAAGGTTTATGGCAACTATTAGTAAAGATTTGGGAAAAGgCCATTACGAAGTAGTTTTCGATGACGGCTTTCAATGGAAGTGTACCACCTGCAGGTTATATAAGGTAAAAGTGTCCGGGAAGGCAGAAGGCCTGACCATAGACACTCCTAAACCGTCCATTGATTCGTCGGCACCATCACCAGTCAAGTACGGGGCGGGACCCAGCACCCCGGCTTTCCACACACACTTGTTTGATCCCACCCGTGATTATCTAGGTTCGAAAAGTGAGCGTCGCGAAATGAAACGTAAATTAAACATCAAGGAGATATTCAATATTGGACAAAAGCGACCCAAAAAGTCTGTACCGAAAGATGTAAAGAAGCCCATTGTTGTGGAAAAGAAGCGTAAGataaatagaaagaaaaagGATGTGCCAACAAGTGTGAAGACTGAAATTCCAGATGCAGTAGCTTCAATAATTGGCACATTTAAAGATGAATCAGTTCAAGAATATGTGAAAAAGGAAACGCAAGAAGAAAATATTACAGAAGAAATTATAGCTGAAGTGGTAAATATAGAAGATAAAGTAGATATAGAAGAAGATTCAAAAGATGAATCTGATGTTAAGATCAAGGAAGAGGCTGCAGATTTGTCCATCACTGATGTTTTAGATATAATTGAGAAAGAAGATAGCGAAACCAGTATTGATACGAAATACGTCCAAGAGGAGGAAGTGAAACTTGAAAAATTTGAGAAGCTGGACGACACAAACCACGAAGAGGTCATAGACAGGATAAAAGAGGTCATTAATAAATTAGAGGATGGTATAAGTAAAGTTCAGAACTCCCCCAAGATAGAGGTAAAGGAAGAGCTTCCAAAGGTAGAGCGGGCAGAACCTTCGGACAAATCTGTGAATGCAGAGAAAGCGTCAGAAAAGGTTAGGAGtaaaaagttgtcaaaggtaAAGAAAGGTAAAAAGTTGAGGTTGTTGCAGGAGAAGAAGGTAAAGAAACAGGTGGAGAAGGTAAAGAGTGAGTTGGAGGAGATGAAGCGGCAGGTGGAGGAGATGCGGCAGCAGATGTTGGCGAGGACCGAGGAGCTGGCGAAGGGCCAGGAGATGCCGGAGAGCTTCCTGCTGCCGGGCGAGTGGTGCTGCCGCTGGGTGAACGGCCAGCCGGTGGGCAAGGTCAGCCAGCTGGAGGCCGAAGTACGGGACGGGAGGAGCGTGCCGGGGCTGCCAAGGAGGAGTGTGCAGGTTGACGATAAAAGGTTGCCCCCTGGTTGGACAAAACACATGGTTCGGCGAAGTTTGGGAAACTCGGCTGGCAAATGGGACGTGGTATTAGTAAATTCGGAAAATCGAAGATTCCATACGAAAACAGATATGCGGAATTTTATGGAAGGTAACACGGATGAGACTCTGCGTACGTATGAGCAGGTCCTGATGGACTTTGGTGTGCATCTGAAGTTGGCGAGACGAATGGGATGGGTCTCAACCACTCCAGGTGGTGTTGATGAGACACCAGTAATATCTTTGCCGGCGGGCACTCTATGCAGCACTTCGCCTCTGGTGAAGCGCCGGAAACTCAACCTAATCAAAAAAGTGCACAAGGATAAGGGGAAGAAACGAAAACTCGGCCTCAATATTAGAATGCCCAAATATTTGACGAAACTTAAAGACGGATCCGATAATGGTGTGGAACCTGATCCGTCGCTGCCACCTTCTGAAGCTAGTTTTGAGGAACCACCCTTAGAAGACGGATATGTATATGTTGGCTCGTTGAAAGTGCAAATCATTGAGAATCTCCTACGATGTCCGGCCGAAGGATGTTATAAGAACTTTAGAAATAACACGTTAATAAAAATGCACATCAAACACTACCACAGAGAGTTAAGGAAAATGCTTGGACGAACTCCTAAAGTGCTTGACTTAGCCTACGCTAGGACTATGCCTGTAGCTTCCCAACGGACGAAGGTTAAGAATCCGAAACTGAAgggtattaaaattaaattgccaAAGCTTCCGAAGCGCGCGGAGGAGACGAAGCTTAAAGTTTTAGAGCCTGTACCAGAGATACATGAGCCGCAAGAGTTGCCTGTTACACCGATTAAGACTGAGGAGCAACCGCCACGGTTGCAGGACTCGCCCAAGCTTCGGCTGGCCCTCATCAACAAGCCAGTGAAGAGACCTCGCGTTCTGTTGCCTGTCCGTCGTCCAGAACCTTCAGAGTTAGAACTCCCCGATAGTCCGACGGATTCGAATCAAAACTTCCCGATAGAATCAGTAGCAGACATACCAATAGTGCCATTGGACTTTGAAACGGCGATTTCGACGCATACAGTGACAAAACCTTCAGATCTGTTCAAGAAGAAAGAGAAAAAGAATAGAGTTGCCATTCTGCCGAAGGTTGTGAGCGAAGAAGAGGATTGGTTCACAATGAACTCAGATATAGAGACTCGCTCCAGCTTCCCGAGATCTGGGACGCCAGACTCCAAGAATATGGATCAGAAGTTGCATCCGATATCCTCGGAGTCTAATGAGGAACTGAAACAGAATGATAGTTATATGTATACAGATACCGGCGAGCGTATAAAGATAGTGCATATGAAGCGCGAGGAGATCATCAACTGCCACTGCGGCTTCCGCGAGGAGGACGGGCTCATGGTGCAGTGCGAACTGTGCCTGTGCTGGCAGCATGCGCTCTGCCACAACATACAGAAGGAGTCGGAGGTCCCCGAAAAGTATACATGCAGCATCTGTCTCAACCCTCGTCGTGGGCGCCGCTCTCAGCGCTTCTTACATGACCAGGATCGTTTATACGAAGGGTTACTGCCCGGAACTCGTCCCAGCGAGCCACTGCGGCGTTCCCACGAGCTATCCGGCAACCTGCTGCGGATACAGGACGCTCTACACGCGCTGCGGGTCAAGTACTACGTGGCCACCAAGAAGAATCACCCCAAACTGTACCTGTGGGCTAAAGACTGGGAGAACGGCGAGCTGAATATCACACAGGAGCGGCTAAACTCTGACTACTCGGAGCTGAGCGTGATGATGGGCGGCGTCGGCAAGGAGAACCTGCCGTTGAGGCCCGACGACCTGGACATACAGACGCCGCCTTCAGAAGACCACGACAGgtacagtcagcgagAGGGGTTGGGCTCGTCGCTGCTGGGCGGGTTGCTGGCGAGCCCGGGCGGCGCGCTGGAGCACGGGCTCGGCGCCGCGGAGCTGGAGCGGCTGGCGCGCACCGTGCAAGACGAGGTTCAACGCGTTGCGGCGCCGCAGCCTGAGGCCGCCATTGAAAACGGTGCCTGCCGCGAGCGCTTACTACGACACATCCAGCGGTGCCAGGCCGTACTGGACGCGCGACTGGACTCCATCGAGGCGCAGGTAGCGGAGCTGGAGTCGCAAGACCCATCGTTCGAAGACGACGAAACGGCAGACTACTTCCCGCGAACCAAACAAACTATACAAATGCTGATGCGGGACCTCGACACCATGGAAGAACTGGGGGTCATCACTTAA
Protein Sequence
MAVKKCCVPKCSSCSARNEDIGVSYHKFPKDISLHKIWTKITCLKLTSTNTTAYVCSRHFCKSDFQINEDSNYLLKSDAVPSIFPWKVKMDKSKMETTEVESKELNSCKDLDGDNLEDIKKFIEDEGNKLQDLPSTSDEKDEVEMNQKVSEADGSQDFDERLAVASSMMDMILSESEEQLAKNRNEKSSTKQTNQGEKGNSSMALSVGSKVEARDFGEYWYPAKITEVDYEEMEVLVHYENASKKHDEWISVNSPRLRPLADPLKPSTPVPEPEPAPGPSIPKGDIAPAIKKEIKEEPRMSTEEKPRLLYKVGERCLARWRDNRRFMATISKDLGKGHYEVVFDDGFQWKCTTCRLYKVKVSGKAEGLTIDTPKPSIDSSAPSPVKYGAGPSTPAFHTHLFDPTRDYLGSKSERREMKRKLNIKEIFNIGQKRPKKSVPKDVKKPIVVEKKRKINRKKKDVPTSVKTEIPDAVASIIGTFKDESVQEYVKKETQEENITEEIIAEVVNIEDKVDIEEDSKDESDVKIKEEAADLSITDVLDIIEKEDSETSIDTKYVQEEEVKLEKFEKLDDTNHEEVIDRIKEVINKLEDGISKVQNSPKIEVKEELPKVERAEPSDKSVNAEKASEKVRSKKLSKVKKGKKLRLLQEKKVKKQVEKVKSELEEMKRQVEEMRQQMLARTEELAKGQEMPESFLLPGEWCCRWVNGQPVGKVSQLEAEVRDGRSVPGLPRRSVQVDDKRLPPGWTKHMVRRSLGNSAGKWDVVLVNSENRRFHTKTDMRNFMEGNTDETLRTYEQVLMDFGVHLKLARRMGWVSTTPGGVDETPVISLPAGTLCSTSPLVKRRKLNLIKKVHKDKGKKRKLGLNIRMPKYLTKLKDGSDNGVEPDPSLPPSEASFEEPPLEDGYVYVGSLKVQIIENLLRCPAEGCYKNFRNNTLIKMHIKHYHRELRKMLGRTPKVLDLAYARTMPVASQRTKVKNPKLKGIKIKLPKLPKRAEETKLKVLEPVPEIHEPQELPVTPIKTEEQPPRLQDSPKLRLALINKPVKRPRVLLPVRRPEPSELELPDSPTDSNQNFPIESVADIPIVPLDFETAISTHTVTKPSDLFKKKEKKNRVAILPKVVSEEEDWFTMNSDIETRSSFPRSGTPDSKNMDQKLHPISSESNEELKQNDSYMYTDTGERIKIVHMKREEIINCHCGFREEDGLMVQCELCLCWQHALCHNIQKESEVPEKYTCSICLNPRRGRRSQRFLHDQDRLYEGLLPGTRPSEPLRRSHELSGNLLRIQDALHALRVKYYVATKKNHPKLYLWAKDWENGELNITQERLNSDYSELSVMMGGVGKENLPLRPDDLDIQTPPSEDHDRYSQREGLGSSLLGGLLASPGGALEHGLGAAELERLARTVQDEVQRVAAPQPEAAIENGACRERLLRHIQRCQAVLDARLDSIEAQVAELESQDPSFEDDETADYFPRTKQTIQMLMRDLDTMEELGVIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01334986;
90% Identity
iTF_00682498;
80% Identity
iTF_00682498;