Emer030879.1
Basic Information
- Insect
- Eudonia mercurella
- Gene Symbol
- -
- Assembly
- GCA_963082485.1
- Location
- OY720043.1:10328862-10336716[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-07 0.00043 21.1 0.0 4 38 17 51 17 55 0.90 2 2 2.4e-09 1.3e-06 29.2 0.0 2 39 94 131 93 135 0.91
Sequence Information
- Coding Sequence
- ATGCGAAATTATAAAAGGAAAACCAATAAAGGTTCTTACGACAAAATTGATTTGCGTGAAGCCGTATTAGCAGTACGTAATGGTACATTAAGTGGATATAAAGCTTCACAGTTGTACAAAATACCAAGAATGACCATTATGGATCATGTAAACATGAAAAGAAAGTCAAACATTATTGGGAGGAGAACCGCGTTGTCTTTGGAAACTGAAACGAACTTAGCATCATATTCAAATATGCCTCGGAATTATGAGAGAAGATCATCGCGTGCTTCATACTCTCAAGATGACTTACAAGCCGCCATAGAAAAGGTGAAAAGCAATGAGCTATCTAACTATGCAGCTTCGCAAATATATGGAATTCCTAAATCCACACTTAATGACAGAGTTAGGAATAAATCTGGTGTAATCAGTCAAACCTTGGGAAGGCCACTAGCAATTCCCCTAGCATTGGAATCGGAGCTCGCGTCTTGTCTTCGCACTCTTGAAAAATGGGGATGGGGATTGTCACGTGACGAAGTGCAGGAGATAACTGCAGAAttcattaaaaagaataaattaaaaacatcattTGCAGATGGGAAACCTGGCGCTGATTGGTTCATATCTTTTAGGAAGCGCCACTGTTTATCAATTAAGAAGCCGCAACCAGTCGAATATCTACGAAAGAGAATGACTGATCCCTTTGTGGTGTACGATTACTTCAAAAAATTGGATGAAGTATTAAAAGAGCTTAATCTTGGGTCATTGCCAGACAGGATCTGGAATTTAGATGAGACCTCGGTCTGTCTAGATCCAACGAAGACAAAAGTAGTTGGTGCAGTAGGCAAACCATGCACAAGAACCATCGCTGGTAGCGCCAAAGAAAACATTACAGTATTAACTACAGTCAACGCAGCTGGCAAAAAATTGACTCctttaataatatacaaagGCAAACACGTTTATGATGAATGGATGGCGGAGGACAAACAGGAGTATGATTTTGACATATCTTATGCAGCCAGTAATCGCGGCTGGATGGAAACGGAGATCTTTTATAACTACATGTTAAAAATCCTTATTCCCAGTTTGGGACCAGAACGACCCGTTCTGATTATTTATGATGGGCATAGCACCCATGTTGACAGCAAGGTTGTATCTTTGGCCATAGACAACAATGTGACTATACTGAAATTGCCAGCGCATACATCACACTTGCTCCAGCCGTTAGATTTAGCGGTATTTAAGTCTTTGAAGACCATGTGGGACAAAAAGCTTGTTAAATTTCAACGACAAAACGTCGGTGTCAAATTACGCAAAAAGGCTTTTGCTGAAATGTTTGCGGAAACATGGAATCAAACAAGTCCGAAAGTGATACAAAGCGGCTTCAAAAAAGGAGGCATTTATCCGTTTGACGCCGATGTAATCCCAGAGGAAAAATTTGACCCAACAGCTTTAAACAGATGGAAGATTTATGGAGCAAAAAAGGAGATAAAGCCCCTCAAACCACTTAAGCAGCTATGCTTAGAGACTATAAACAACGTTATGTTTTTCCCGACAGCTGCCTATACAATTCAGAGTGTTGCCTATTGTGACGCTGAACATCCTGATCCATCGGTACCAAAAAGTACGTTTGAGGAATTACTTTTACAGACGCTTAAATATCATCCCCAAACCACAAACAAAGTAACACGAAAACGTGTTGCATCCGGAGCTGAAGTTATCACACGccagattttggaaaacaagAAAAACGAACAGCATAAGACATCCAAAGAAACATTGCAACAGCTGAAAACAAAGTCAaccaaaatcaaacaaaattcaaaaagttCTCTGAGTGGCACTGCAGTTCAAGTTAAAGTTGATTTGATGGACAGGAATATAGATGATTCTAGAAAAATTGGACAAAACAAAAGGAAAGTCAAAACTGAGACGGAAcctcgaaaaaaaattaaaacgtgtTCGAGTACCTTAACTTTCATCAGCGAACAAATAAATTTTCAGAGCGATTCTGATGTCTTAGAAGACTGCGAAAATTTTTCAGAATTTGATCTATTTAAGTGGATTGAGGATGATGATGCACGTGATATGGATGGATTATTGCGAAAATCAATCAAAAAGTCACAAAAagatttgaataaagatttgcAGTTTGATTTGATACAAATGGAATCGGAGATGAAAAACGATCTACAAGAACAGAAGATTAAAAACGTTTGGAATTTAGACACAGGACATAAACATGAAGACGAACATAGTGATATGATAGATATTTTGGATGATCAAACAGGATTTCTGCGAAAAGTGACAGTTACTAAGGCGATAGTAGAGAAACCAAAGCCATCAAAGGACTCCGTAAGTTGCAAATATCtcgaaaaatataaagaaaatgttGCTGATATCGTAAACCACCGAAACCGTAACGAAATACAGTCATataccaaaaaaaatgtaaagaaacGAACAAGtacaaaacctaaaaaaaagaagatattgCGTAGTAGCTCTACAACTACGGACGAAGATATTATGAGCGTTCATACTGATAGCGACATATGTGACGTAATATCGATTCAAAACGAGGAAGAAGATGAAAATGTAATAGTAGTAGTACCGACTCAATATGAAGAAAACGATAAAGATTTATTCAGAAAATCTATTGATGAAAAAGAAGCTGCTATATTTGCAAAAATTTATGAAATCGACAACAttgaaaaacaaacacttaTTGACAAAGAGAAACCAAAAACTAGGAAGAAAAGAGATGTACAAAAACTAGAAAGGCAAATAGTGACTCGGCAGACTAATAAAAAGCagaaaaagaatgaaaaaaaagaaaacgaagGTACAATATTAGTGTCGACAAAAAAAGTAAACGATGCTTGTACGTACCATCTTGGACATCATATATTGGCTAGGTACTTTTACAAGAACAGTTGGAAGCATTACGTGGGATCGATAACAGAAATTATTAATGAGAACCAGCTTGAAAAAACATATAGAATATCTTTCTATAAAACTGTACggacaaaaaatacattaaaatttaccCAACCAAAGAGGTCTGACGAGGACTGTATACCAGCCAATCTAATTATCAAAGAAATAGAATTGATCCAAATTAAGGAAAATCCAAATGAATTTGTCTTaaatgatgatagtgatgatgtttatttttcataa
- Protein Sequence
- MRNYKRKTNKGSYDKIDLREAVLAVRNGTLSGYKASQLYKIPRMTIMDHVNMKRKSNIIGRRTALSLETETNLASYSNMPRNYERRSSRASYSQDDLQAAIEKVKSNELSNYAASQIYGIPKSTLNDRVRNKSGVISQTLGRPLAIPLALESELASCLRTLEKWGWGLSRDEVQEITAEFIKKNKLKTSFADGKPGADWFISFRKRHCLSIKKPQPVEYLRKRMTDPFVVYDYFKKLDEVLKELNLGSLPDRIWNLDETSVCLDPTKTKVVGAVGKPCTRTIAGSAKENITVLTTVNAAGKKLTPLIIYKGKHVYDEWMAEDKQEYDFDISYAASNRGWMETEIFYNYMLKILIPSLGPERPVLIIYDGHSTHVDSKVVSLAIDNNVTILKLPAHTSHLLQPLDLAVFKSLKTMWDKKLVKFQRQNVGVKLRKKAFAEMFAETWNQTSPKVIQSGFKKGGIYPFDADVIPEEKFDPTALNRWKIYGAKKEIKPLKPLKQLCLETINNVMFFPTAAYTIQSVAYCDAEHPDPSVPKSTFEELLLQTLKYHPQTTNKVTRKRVASGAEVITRQILENKKNEQHKTSKETLQQLKTKSTKIKQNSKSSLSGTAVQVKVDLMDRNIDDSRKIGQNKRKVKTETEPRKKIKTCSSTLTFISEQINFQSDSDVLEDCENFSEFDLFKWIEDDDARDMDGLLRKSIKKSQKDLNKDLQFDLIQMESEMKNDLQEQKIKNVWNLDTGHKHEDEHSDMIDILDDQTGFLRKVTVTKAIVEKPKPSKDSVSCKYLEKYKENVADIVNHRNRNEIQSYTKKNVKKRTSTKPKKKKILRSSSTTTDEDIMSVHTDSDICDVISIQNEEEDENVIVVVPTQYEENDKDLFRKSIDEKEAAIFAKIYEIDNIEKQTLIDKEKPKTRKKRDVQKLERQIVTRQTNKKQKKNEKKENEGTILVSTKKVNDACTYHLGHHILARYFYKNSWKHYVGSITEIINENQLEKTYRISFYKTVRTKNTLKFTQPKRSDEDCIPANLIIKEIELIQIKENPNEFVLNDDSDDVYFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01334743;
- 90% Identity
- iTF_01334741;
- 80% Identity
- -