Elac028632.1
Basic Information
- Insect
- Eudonia lacustrata
- Gene Symbol
- sip1
- Assembly
- GCA_947562085.1
- Location
- OX387327.1:15179863-15201350[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-57 5.2e-53 181.3 6.0 6 270 370 616 365 622 0.96 2 2 0.003 49 4.2 0.1 244 274 618 648 616 649 0.91
Sequence Information
- Coding Sequence
- ATGTCGGACGATGAGGTTATACGGTTTGAAATAACAGATTATGATTTAGACAATGAATTCAATCCTAGAAGAGGTGGAAAAGCAAAGAAAGAGCAACAAATATACGGAGTCTGGGCGAAAGACAGTGATGATGATGAAAATGAGGACACCATTAGGCAAAGAAGCCGGAAGCAGAAGGACTTCTCGGCGCCTATCGGTTTTGTGGCTGGTGGAGTACAGCAGGCTGGCAAAAAGAAAGAGGAGAAAAAAGAACTAGAGCCGTCCGACGCATCAACGTCGAAAACTGCATTTGCGGACAGTTCCGACGAGGAAGGCCCACAAAACCCGGATGAACGGGACACGGCAGGGCTGCGCCGGCGTGGGCAAGGCGCGCGCCCCGCCAACCTGGGCGGCAGTGTGGGTGCGTGGGAGCGCCACACCAAAGGCATTGGAGCTAAGCTGCTATTACAGATGGGCTACAAACCGGGCATGGGTCTGGGTAAAGACCTCCAAGGTATTTCGGCGCCTGTCGAAGCGACTGTAAGACGGGGCCGAGGCGCTATCGGAGCTTATGGACCGGAGAAAGCAGCACAAAAATTGAAAAAAGAAGAAGAACGTCGCCTGAAAGAGAAGGAAGAGAAAGAGAAGGGGACAGCAGAGAAAACTTACAACTGGAAGAAGTCGCACAAGGGCCGCTACTTCTACCGAGACTCCGCAGACGTCATACAAGAGGGTAAACCCACGATGCATACTATAGCAAGCAGCGAGCTATCTCGCGTACCAGTTATCGACTTGACCGGTCGCGAGAAACGAGTTCTATCCGGCTACCACGCTTTGCGAGCCGCCGCGCCCCGCTACGAGCACGAGCCGCGACGAGACTGTAGGAACTTCGCCGCGCCACAGCTGGTGCACAACCTGGAGCTGGTCGTGGATTGCTGCGAGCAGGACATAATACAAAACGCTCGCGAGCTTCAAACAGCGGAAGACGAGATAGTAGTACTAGAAAGGGAGTTAGAAGAGTGCGATTTGAAACTGACGGAGCAGGACGACGTGATCTCCAAGATGCAGGGCATCATACACCGCGTGGAGGAGTTGGCGGAGCCTGATGTGTCGCTGGAGATGGCCTATGAAGTGCTGGCTGACTTGAAGGAATCATACCCCACGGAGTACGAAGTGTTCGGCCTTGGCACCATCGCTGGGAATATAGTTAGTCCGCTACTCAGCGCACTCCTCGCCACGTGGCAGCCACTAGAGAACCCCGAGGAACCGATCCCCACCTTCATCAAGTGGCGGAAGCTCCTCACCGACGAGGCGTATAGCAGCCTGCTGTGGCAACACTATGTGCCGCACATCAACACTGCCGCTGAGTCATGGAACCCTCGCGCTCCGAGCCCCATGCTCCGCGCGCTGACGAGTTGGTCCGCGGCGTGCCCCGCGTGGATCCTGTCCGCCGCCGCCGCGCGCAGCGTCGTGCCCAAGATCCTGGCGGCCGTGCGGGCCTGGGACCCCACTGGGGACACGCAGCCGTTACACCACTGGGTGCTGCCCTGGCACGACTTAGCAGGCGAAGCCCTAGCCCGCGGCACGTACCCCGCGATCCGGTCGCGGCTCGCCACCGCGCTGGGGGCGTGGCACCCCGCCGACCCGTCCGCGCGCACGCTGCTGGCGGCGTGGCGCCACGCGTGGGGCTCCGCCCTCACCGCCATGCTGCACCAGCACGTGGTGCCCAAGCTGGACCACTGTTTACAGCACGCGCCGCTTGAGCTGCTGCAGCATTCTAACGCTGCGTGGCTGTGGTGCGTGGACTGGCTGGAACTCCTCGGCGCTCCCACCATCGCGGCGGTGGCTGCGCGCGCGCTTCTACCACCCGCGTGGCTGTGGTGCGTGGACTGGCTGGAACTCCTCGGCGCTCCCACCATCGCGGCGGTGGCTGCGCGCGCGCTGCTTCCTCGCTGGTTGTGCGCACTAGCGGCCTGGCTCAATACCAATCCGCCTCATGCTACCGTGCTCGCTTCGTACACCAACTTCAAGAAATCGTTTCCCGATGAAGTATTGAAGGAGCCCGCGGTGCGCGATGCGTTTCGCAAAGCCCTTGACATGTTGAACCGAAGCACGGACATCGACTCTGTAGAACCGCCCCCGCCCCCCCGCTTCACCATCACCGAAGCACCGAAGGAAACCTCGAGGATTGCGGAGGTCCTGGCCTCGGCAACACAACAGAAGTCCTTCTCGGAGTTACTAGAATCGCGTTGTATCGAAAAAGGTATCACCTTTGTACCTATAGTAGGCAAGAACAGGGAGGGGAGACCTCTGTACAAGATTGGAGACTTGCAGTGTTACGTCATCAGGAATGTAGTTATGTACTCCGAGGATAATGGGAGAACCTTCAGCCCTATCAGTATGGATAGACTGTTGGCTATGGTGGAAGATTAA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPRRGGKAKKEQQIYGVWAKDSDDDENEDTIRQRSRKQKDFSAPIGFVAGGVQQAGKKKEEKKELEPSDASTSKTAFADSSDEEGPQNPDERDTAGLRRRGQGARPANLGGSVGAWERHTKGIGAKLLLQMGYKPGMGLGKDLQGISAPVEATVRRGRGAIGAYGPEKAAQKLKKEEERRLKEKEEKEKGTAEKTYNWKKSHKGRYFYRDSADVIQEGKPTMHTIASSELSRVPVIDLTGREKRVLSGYHALRAAAPRYEHEPRRDCRNFAAPQLVHNLELVVDCCEQDIIQNARELQTAEDEIVVLERELEECDLKLTEQDDVISKMQGIIHRVEELAEPDVSLEMAYEVLADLKESYPTEYEVFGLGTIAGNIVSPLLSALLATWQPLENPEEPIPTFIKWRKLLTDEAYSSLLWQHYVPHINTAAESWNPRAPSPMLRALTSWSAACPAWILSAAAARSVVPKILAAVRAWDPTGDTQPLHHWVLPWHDLAGEALARGTYPAIRSRLATALGAWHPADPSARTLLAAWRHAWGSALTAMLHQHVVPKLDHCLQHAPLELLQHSNAAWLWCVDWLELLGAPTIAAVAARALLPPAWLWCVDWLELLGAPTIAAVAARALLPRWLCALAAWLNTNPPHATVLASYTNFKKSFPDEVLKEPAVRDAFRKALDMLNRSTDIDSVEPPPPPRFTITEAPKETSRIAEVLASATQQKSFSELLESRCIEKGITFVPIVGKNREGRPLYKIGDLQCYVIRNVVMYSEDNGRTFSPISMDRLLAMVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00035678;
- 90% Identity
- iTF_00682443; iTF_00683377;
- 80% Identity
- -