Elac014504.1
Basic Information
- Insect
- Eudonia lacustrata
- Gene Symbol
- -
- Assembly
- GCA_947562085.1
- Location
- OX387321.1:1023279-1028607[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-11 6.9e-08 32.9 0.0 4 39 123 159 121 163 0.90 2 4 1.6e-11 3.8e-08 33.7 0.3 2 39 175 212 174 215 0.92 3 4 1.1e-15 2.6e-12 47.1 0.1 2 45 230 274 229 274 0.96 4 4 1.5e-18 3.5e-15 56.3 0.0 1 43 281 324 281 325 0.96
Sequence Information
- Coding Sequence
- ATGATGATGTTTTCGTCGCAGTCAGGGTTGGAGGAGCTAGCGCCGCCTGCGCCAGCGGGCCCCGCCGCCACGCCGGTGTGCGTGAAACAGGAGCCGGCGGAGGCGCCGCCCGCCGTCATGCTCGAGAATCTGCAGCCCGCGCCTCCCAGCAACGCCACGTGCTCGACATTGCTAGACCGACATCTCGCTATGCTCAGCTCCACCGAAGTGCCTGACTCATCGGACTTTATGCCGCTAATGGCTGTAAAGGACGAGCCGTTATCTGAAGGAGAACAACATCAATTCAGTGGCGAGGACACGAACGACTCGTGCAGCCAGTCGGAGCCCGGCCACACGCGCAGCAGCCCCAAGAGCTGGAATCAGCGCGACATGGACAACGCGTTGGAGGCCTTGAGGAAGCACAACATGAGCCTAACTAAGGCGTCGGCGACGTACGGCATCCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTGGGCATCGACACGCCCAAGAAGGAGGGCGCCGCCAAGTCCTGGAGCGAGGCCGACCTGCGCGGCGCACTGCACGCGCTGCGGGCCGGCGCCATCTCCGCCAACAAGGCTAGCAAGGCGTACGGCATCCCGAGCAGCACGCTCTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCCCCGACGGCGTGGCGCCGCGCCGACCTGACGCGCGCGCTCGCCTCCATCCGCGGCGGCGCTTGCAGCGTGCAGCGAGCCGCCGCGCAGTACGGCATCCCCACCGGCACATTGTACGGGCGATGTAAACGAGAGGGCATTGAACTGTCCCGGTCTAACCCTACGCCGTGGTCGGAAGACGCGATGGGAGAAGCACTAGAAGCCGTCAGGGTTGGCCAGATGTCCATAAACCAGGCCGCCATCCACTTCAACCTGCCGTACTCGTCGCTCTACGGCCGGTTCAAGCGGTGCAAATACCAGGCGCAGGGCATCCCACCTATACTGCCGGACATGCAGAAAGACATGGAAATAGAGAACAGCCAGAGTGTACCTCCTGAGGGGCAGTACTACTCGCAGCAGTTGGCCGGCCAGCCGCACGAGCACGAGCTCAGCCTGCACGGCCAATACCTGAGCCCGAGCTTCGCGGAGTACGCGGGCGGCGCGGCGGAGCTGGGGGCAGCGGGCGCGGAGCCCTACGCCGCCCTGTACTATGGCTGCGGCGCCGGCGTGGCGGGCAGCTGA
- Protein Sequence
- MMMFSSQSGLEELAPPAPAGPAATPVCVKQEPAEAPPAVMLENLQPAPPSNATCSTLLDRHLAMLSSTEVPDSSDFMPLMAVKDEPLSEGEQHQFSGEDTNDSCSQSEPGHTRSSPKSWNQRDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLTRALASIRGGACSVQRAAAQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQAQGIPPILPDMQKDMEIENSQSVPPEGQYYSQQLAGQPHEHELSLHGQYLSPSFAEYAGGAAELGAAGAEPYAALYYGCGAGVAGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682280;
- 90% Identity
- iTF_00682280;
- 80% Identity
- -