Elac001871.1
Basic Information
- Insect
- Eudonia lacustrata
- Gene Symbol
- e2f7
- Assembly
- GCA_947562085.1
- Location
- OX387341.1:17645157-17646897[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-22 2.5e-18 66.4 0.0 1 65 64 130 64 130 0.94 2 4 0.96 1.6e+04 -3.4 0.0 11 28 136 152 135 154 0.64 3 4 6.2e-17 1e-12 48.4 0.0 1 61 165 246 165 256 0.90 4 4 0.58 9.5e+03 -2.7 0.0 21 34 294 307 284 315 0.58
Sequence Information
- Coding Sequence
- ATGTATGAAAATGACAACATTACCTGCACCCCGAAGCGTTGCGCACTCACAGAACTAACGAATGCATCGAACAATGTTTCTCCTACTGCCAACCTCAAACTATTGACTAGTGTCGCGTTGCAAGAGAACGATCTCGTAAACCACAATGCGTTGCAATACCCGACGCCGCCGCCGAGCGCTGTTCATCGCAAAGAAAAATCCTTGCAGATATTATGCGACAGATTCCTTGAACTGTATCCTCTTCATGGAAAGAGTGCAGTTGAAATTCAATTAGATTGTACTGCAGCACGTTTAGGAGTAGAGAAGAGGCGAATGTATGACATTATAAATATACTAGAAGCAATGCAATGTGCCGTCCATAAGAGAAAAAATACCTATCTGTGGTATGGAGGATCAAGGCTAAATTCTTTCTTAAAGATGCTGAAGAAAGAAGGGGAGAATCTTAAGCTGTCTGATGCATTACGTGGCAAAGCTCCTAAGCCACCTGCTCCTAAACATAAGACTCTTGGAGTGATGGCCCAAAGGTTTCTTATGCTGTTCTTAGTGGAGCCACCGAACACTCTTATAAATCTGGAGATGGCAGTGCGGGTGCTGATCGACACATCTAACAAGAACAGAACAGCACTGTCGCCTGAGCAGCAGGATCGGCAACACAAATCCAAAGTCAGGAGGCTCTATGACATTGCTAATGTATTTATTTCTGTTGGTCTCATTGAAAAGGTATCTGGAAACTCTATATTGAAAAAGCCAGTCTTCAAGTATGCAGGACCTTTTAAAATTAAAAAGTCTGATGAGGTTTTTGACACACCTCCAATCACACCATTGACCGTGTTTGGGCAACGGACACCATGCCATGTCTTTGCCAGCAAGTCCAAACGAAAATTGGAGTTCACAACTTCTAATGTCTGCAAGCAACTAAAATTTGGCATTAACACACAAATAAATGCACCATCGCACAAGTGGAATGACATTTTGCTTGTTGCAAACATGGAATTGACTAAAATTAATAATGGCAAAATGTTGTGA
- Protein Sequence
- MYENDNITCTPKRCALTELTNASNNVSPTANLKLLTSVALQENDLVNHNALQYPTPPPSAVHRKEKSLQILCDRFLELYPLHGKSAVEIQLDCTAARLGVEKRRMYDIINILEAMQCAVHKRKNTYLWYGGSRLNSFLKMLKKEGENLKLSDALRGKAPKPPAPKHKTLGVMAQRFLMLFLVEPPNTLINLEMAVRVLIDTSNKNRTALSPEQQDRQHKSKVRRLYDIANVFISVGLIEKVSGNSILKKPVFKYAGPFKIKKSDEVFDTPPITPLTVFGQRTPCHVFASKSKRKLEFTTSNVCKQLKFGINTQINAPSHKWNDILLVANMELTKINNGKML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01020016;
- 90% Identity
- iTF_00683116; iTF_00682161; iTF_01334547;
- 80% Identity
- -