Epro032415.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudemis profundana
Gene Symbol
-
Assembly
GCA_947034915.1
Location
CAMQQJ010000372.1:2039329-2064866[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.38 31 6.5 0.3 1 23 253 276 253 276 0.96
2 16 0.89 72 5.4 1.0 1 23 284 306 284 306 0.96
3 16 0.007 0.56 12.0 2.2 3 20 339 356 338 358 0.93
4 16 0.023 1.9 10.4 1.3 2 21 365 384 365 385 0.92
5 16 0.0013 0.11 14.3 0.9 2 23 855 876 854 876 0.94
6 16 0.00044 0.035 15.8 0.3 1 23 881 903 881 903 0.98
7 16 0.00031 0.025 16.3 4.5 1 21 912 932 912 937 0.94
8 16 0.0055 0.44 12.3 2.2 1 23 945 968 945 968 0.89
9 16 0.0071 0.57 12.0 0.3 1 23 974 997 974 997 0.96
10 16 0.0089 0.72 11.7 0.4 3 23 1011 1032 1009 1032 0.93
11 16 0.0089 0.72 11.7 0.4 3 23 1046 1067 1044 1067 0.93
12 16 0.0089 0.72 11.7 0.4 3 23 1081 1102 1079 1102 0.93
13 16 0.0089 0.72 11.7 0.4 3 23 1116 1137 1114 1137 0.93
14 16 0.0089 0.72 11.7 0.4 3 23 1151 1172 1149 1172 0.93
15 16 0.057 4.6 9.1 0.4 3 19 1186 1202 1184 1203 0.89
16 16 0.02 1.6 10.6 1.2 1 23 1216 1239 1216 1239 0.98

Sequence Information

Coding Sequence
ATGAGggaaattaatataaacattgAAGGTTACAATGTGAACGGAATATGTGTCGGTTGTCTGAACTATAATCGTAAAATGTATTATTGTGATCAAATTAAGgaatgtttgaaattaattggAAATATCGATGTGCCCGACGGCCTGCAAGTCCAGGTGTGCTGGGAGTGCTTGGCCTCTGTCCAAGCAGTACTCCGGTTCCGGAACCTCATCATCAACTCGTACAATGTCCTCATTGATTACTCCAGACAGCACACATTCCTGAACTCCCCAGCGGATTTGTCCATACACGCGCACCAGCGGCTGTCCACGACGACCACAGAAGTGTCCACTGTTCAGGACTCGCTGATGATAGAGGTGGATGTCAGTGTGGTCAAGGAAGAGACCAAGGAGGAGGTCCCCGAAGACCAGGACACGTATACTGAAACAGAAACGGTCAAGTCAGAGACTGAATTCTTTGACAATGACAATGCAGACTTCCCCCAGGACGACCGGGCGTCGTCAGAAGATGACGTGCAACTGTCGAAGCtcaagaagaagaaagaaagaaggacCAAGAAAGTGAAGAAAAAGAGGAAAGAGCAGAAACAGAGGATCAAGACAAatgACGTCAAAACGGAACAAGCACAGCAACCAAACAAACGAAAACTAAAAAACCTGCCCTCTGACTTAGTGGAGCTATACACCATGACCGAAGAAGAGATGTGGCAGATCAGACAAGAAGACGTTTCCAGTGCAGAGTTCTGTGCCCTCAAGTATAAATGCGAGAACTGTATCATTGGATTCAATTCCGAGAAGCTGATGAATGATCATATGCAAGGGAAACATGTGCCGAAGAGCCCGGACTGCCACCAGTGCGATGTATGCCGCGCGTACTTCCTGACCAAAGACAACGTGTGGAAGCATCGCGCGCTGCACCTCGCCGCCTACCGCTGCGGCGCGTGCGGCGCGCGCACCGCGCTCAAGCGCCGCATGCACAGACATGCGCAGGCGCATCGCGGGCAGGGCGCCCACTGCAGCACGTGCGGGGAGCACTTCAGTACAAAGTCGAAGCTAACGTACCACAAAGGCGTGTGCAACCAGGCGCGGCCGCAGTGCGACTGTTGCGGCAAAGTCTTCGCCAACAAGATGACCCTGAAATACCACCTCAAGTTGTCTGAAGCAAAGCGAAAATATTACGCGTGGAATGAGCCCAGCATGCAGACGGCTATTGAAGCAGTGAGAAAAAAAGATGTCGGTTTAAACGACGCGGCCAGAAAGTACGGTGTTCCCAAAGCGACACTCAAGCGTAGATTGGACGGAAGCAATCAAAAGGCCAAAGAAGCCGTTCAAATAGTGGGATCTGAAGGTGATATCCCACCACAATTAGAAAAAGAACTGTGTGATCATGTTTTAAATATGGAAAGAAGTTTGGATTATGTTAAACCGATAGATATTAGACGACTGGCGTTTGACTTGGCagaaaaaaataacatcaaGAATAGATTTAGTAAAGAAAAAAGAATGGCAGGGAAAAAGTGGTACTACTCCTTCATGAAACGACATCCAGAGTTGAGTCCGAGACAGCCAAGAGCTATGAGCAGAGTTACCGGTTTTAATAAAACTGtagtaaaagatttttttgacaAATTGGAGGCGGTGATGGACAAACATGAGATCAATGATGCTCAGCGCATTTTTAACATGGATGAGACGGGTTTGTCAACAGTGCAAAGAAAACCGAGAAAAAATATAGATCAAAAAGGCAAACAAGTCGTGGCACGAAAGCGTGGTACTACAACTACAGCCGTATGTTGTGCCAGCGCTGCTGGTTTCTTTGTGCTACcacttattatttttaagcgCAAGAGAGCTAAAGATGAGTTGAGAGATGGAGCACCGCCTGGCACCATATTCGCGTTCAATCCAGTCAGTGGTTACATCAACAAAGATATATTTTATCTGTGGTTGCAACATTTTGTTGAAACTGTGAAGCCGACTCCGGAGAAGAGAGTTTTGCTTTTGCTAGACGCCAGTCACACTAAAAATCTGGCCGCTGTTAAGTTTGCAAAAAGGCACGGCGTGGTGATCCTTCCATTTCCGGCCCACATTCGTAAGTTGCGGCCTCTGGACGTGTCATTTTTTAAGCCTTTAAACCTGTTCTATATAGACGAAACGGAAAAATGGCTGCGCCAACATCCTGGAAGAACAGTTACGACATTTCAGGTGTCTATGCTGTTTGGGAAAGCTTATTCGCGAGCTGCTGTGGGCACCGCTTCGAATGGCTTTACAAAATCAGGAATATATCCTCTGAACAAAGACGTATTTCAAGACTACGAGGTTATAGTCCCAGAAGAGGAAATCATACATCCACGTAATCTGTCAACTCAAGAAGATCCGTTGGCTGTGAATTCACCAATTAAAAGAGAATTATTAGAGGGATACGTAGAATCAAGCCCCGACAATTCAAGATCAGTTGAGGTGCAAAGTAAAACAACTGCGAtggaagttattgccgaaataCATGCAGAACGgatattACCTCAGAACAAGGATGACAAGCCGAAGGAGAAGCTGTTCATCTCCTGCAAGGGCTGCAACAAGGTGTTCCACTCCAAAAAGGCGTATCGGGCTCACGTCGTGATCCACGACGGAGTGACGTACCCTTGTCCGATCTGCGGGAAGCTGTTCCAGTGGAAACGGAACCTGGCGCGGCACACCAGAAACCACAGAGACCGAGACGCAGGCGCCACCCACGAATGCCGAGACTGCGGCAAAGTGTTCAGCAGCCGAGACTGCTACAACAACCACATGAAGCTGAGCAAACGGCACGTGCACGAGGACGCATACGCGCACACATGTTCGTATTGCGGCAAGAAGTTCGCGACCAAGTGGTGTATGGTGGACCACGTGGACTGGGACCACCTCAAGCGGATCAAGTACCAGTGCAGCGTCTGCTTCAAGGCATTTAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCCTACAAGACTGTAAAAAGACTGAAAGGCCACGTATGGGCGATGCACACCAACCGCTCGACCACGAAAAGCTTCAAGTGCAAGCTTTGCCCAGCAACCTTCACCTGGCAGACCTCCATATACAAGCACATGAAGATGATGCACGACAACAAGCGGCCCAAGCAACTCCGGCCGCTACCGACGAAGAAGCTGGAGCCGTACCCGGGCGAAGCGGCCCGCCCCTACTTCCCGCAGCCACAGCTGCATCTGCCGCTCCATATCGCGTAG
Protein Sequence
MREININIEGYNVNGICVGCLNYNRKMYYCDQIKECLKLIGNIDVPDGLQVQVCWECLASVQAVLRFRNLIINSYNVLIDYSRQHTFLNSPADLSIHAHQRLSTTTTEVSTVQDSLMIEVDVSVVKEETKEEVPEDQDTYTETETVKSETEFFDNDNADFPQDDRASSEDDVQLSKLKKKKERRTKKVKKKRKEQKQRIKTNDVKTEQAQQPNKRKLKNLPSDLVELYTMTEEEMWQIRQEDVSSAEFCALKYKCENCIIGFNSEKLMNDHMQGKHVPKSPDCHQCDVCRAYFLTKDNVWKHRALHLAAYRCGACGARTALKRRMHRHAQAHRGQGAHCSTCGEHFSTKSKLTYHKGVCNQARPQCDCCGKVFANKMTLKYHLKLSEAKRKYYAWNEPSMQTAIEAVRKKDVGLNDAARKYGVPKATLKRRLDGSNQKAKEAVQIVGSEGDIPPQLEKELCDHVLNMERSLDYVKPIDIRRLAFDLAEKNNIKNRFSKEKRMAGKKWYYSFMKRHPELSPRQPRAMSRVTGFNKTVVKDFFDKLEAVMDKHEINDAQRIFNMDETGLSTVQRKPRKNIDQKGKQVVARKRGTTTTAVCCASAAGFFVLPLIIFKRKRAKDELRDGAPPGTIFAFNPVSGYINKDIFYLWLQHFVETVKPTPEKRVLLLLDASHTKNLAAVKFAKRHGVVILPFPAHIRKLRPLDVSFFKPLNLFYIDETEKWLRQHPGRTVTTFQVSMLFGKAYSRAAVGTASNGFTKSGIYPLNKDVFQDYEVIVPEEEIIHPRNLSTQEDPLAVNSPIKRELLEGYVESSPDNSRSVEVQSKTTAMEVIAEIHAERILPQNKDDKPKEKLFISCKGCNKVFHSKKAYRAHVVIHDGVTYPCPICGKLFQWKRNLARHTRNHRDRDAGATHECRDCGKVFSSRDCYNNHMKLSKRHVHEDAYAHTCSYCGKKFATKWCMVDHVDWDHLKRIKYQCSVCFKAFKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTVKRLKGHVWAMHTNRSTTKSFKCKLCPATFTWQTSIYKHMKMMHDNKRPKQLRPLPTKKLEPYPGEAARPYFPQPQLHLPLHIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00680453;
90% Identity
iTF_00680453;
80% Identity
iTF_00680453;