Epro032415.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudemis profundana
Gene Symbol
-
Assembly
GCA_947034915.1
Location
CAMQQJ010000372.1:2039329-2064866[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-11 4.2e-08 34.0 0.0 4 42 399 437 397 439 0.93

Sequence Information

Coding Sequence
ATGAGggaaattaatataaacattgAAGGTTACAATGTGAACGGAATATGTGTCGGTTGTCTGAACTATAATCGTAAAATGTATTATTGTGATCAAATTAAGgaatgtttgaaattaattggAAATATCGATGTGCCCGACGGCCTGCAAGTCCAGGTGTGCTGGGAGTGCTTGGCCTCTGTCCAAGCAGTACTCCGGTTCCGGAACCTCATCATCAACTCGTACAATGTCCTCATTGATTACTCCAGACAGCACACATTCCTGAACTCCCCAGCGGATTTGTCCATACACGCGCACCAGCGGCTGTCCACGACGACCACAGAAGTGTCCACTGTTCAGGACTCGCTGATGATAGAGGTGGATGTCAGTGTGGTCAAGGAAGAGACCAAGGAGGAGGTCCCCGAAGACCAGGACACGTATACTGAAACAGAAACGGTCAAGTCAGAGACTGAATTCTTTGACAATGACAATGCAGACTTCCCCCAGGACGACCGGGCGTCGTCAGAAGATGACGTGCAACTGTCGAAGCtcaagaagaagaaagaaagaaggacCAAGAAAGTGAAGAAAAAGAGGAAAGAGCAGAAACAGAGGATCAAGACAAatgACGTCAAAACGGAACAAGCACAGCAACCAAACAAACGAAAACTAAAAAACCTGCCCTCTGACTTAGTGGAGCTATACACCATGACCGAAGAAGAGATGTGGCAGATCAGACAAGAAGACGTTTCCAGTGCAGAGTTCTGTGCCCTCAAGTATAAATGCGAGAACTGTATCATTGGATTCAATTCCGAGAAGCTGATGAATGATCATATGCAAGGGAAACATGTGCCGAAGAGCCCGGACTGCCACCAGTGCGATGTATGCCGCGCGTACTTCCTGACCAAAGACAACGTGTGGAAGCATCGCGCGCTGCACCTCGCCGCCTACCGCTGCGGCGCGTGCGGCGCGCGCACCGCGCTCAAGCGCCGCATGCACAGACATGCGCAGGCGCATCGCGGGCAGGGCGCCCACTGCAGCACGTGCGGGGAGCACTTCAGTACAAAGTCGAAGCTAACGTACCACAAAGGCGTGTGCAACCAGGCGCGGCCGCAGTGCGACTGTTGCGGCAAAGTCTTCGCCAACAAGATGACCCTGAAATACCACCTCAAGTTGTCTGAAGCAAAGCGAAAATATTACGCGTGGAATGAGCCCAGCATGCAGACGGCTATTGAAGCAGTGAGAAAAAAAGATGTCGGTTTAAACGACGCGGCCAGAAAGTACGGTGTTCCCAAAGCGACACTCAAGCGTAGATTGGACGGAAGCAATCAAAAGGCCAAAGAAGCCGTTCAAATAGTGGGATCTGAAGGTGATATCCCACCACAATTAGAAAAAGAACTGTGTGATCATGTTTTAAATATGGAAAGAAGTTTGGATTATGTTAAACCGATAGATATTAGACGACTGGCGTTTGACTTGGCagaaaaaaataacatcaaGAATAGATTTAGTAAAGAAAAAAGAATGGCAGGGAAAAAGTGGTACTACTCCTTCATGAAACGACATCCAGAGTTGAGTCCGAGACAGCCAAGAGCTATGAGCAGAGTTACCGGTTTTAATAAAACTGtagtaaaagatttttttgacaAATTGGAGGCGGTGATGGACAAACATGAGATCAATGATGCTCAGCGCATTTTTAACATGGATGAGACGGGTTTGTCAACAGTGCAAAGAAAACCGAGAAAAAATATAGATCAAAAAGGCAAACAAGTCGTGGCACGAAAGCGTGGTACTACAACTACAGCCGTATGTTGTGCCAGCGCTGCTGGTTTCTTTGTGCTACcacttattatttttaagcgCAAGAGAGCTAAAGATGAGTTGAGAGATGGAGCACCGCCTGGCACCATATTCGCGTTCAATCCAGTCAGTGGTTACATCAACAAAGATATATTTTATCTGTGGTTGCAACATTTTGTTGAAACTGTGAAGCCGACTCCGGAGAAGAGAGTTTTGCTTTTGCTAGACGCCAGTCACACTAAAAATCTGGCCGCTGTTAAGTTTGCAAAAAGGCACGGCGTGGTGATCCTTCCATTTCCGGCCCACATTCGTAAGTTGCGGCCTCTGGACGTGTCATTTTTTAAGCCTTTAAACCTGTTCTATATAGACGAAACGGAAAAATGGCTGCGCCAACATCCTGGAAGAACAGTTACGACATTTCAGGTGTCTATGCTGTTTGGGAAAGCTTATTCGCGAGCTGCTGTGGGCACCGCTTCGAATGGCTTTACAAAATCAGGAATATATCCTCTGAACAAAGACGTATTTCAAGACTACGAGGTTATAGTCCCAGAAGAGGAAATCATACATCCACGTAATCTGTCAACTCAAGAAGATCCGTTGGCTGTGAATTCACCAATTAAAAGAGAATTATTAGAGGGATACGTAGAATCAAGCCCCGACAATTCAAGATCAGTTGAGGTGCAAAGTAAAACAACTGCGAtggaagttattgccgaaataCATGCAGAACGgatattACCTCAGAACAAGGATGACAAGCCGAAGGAGAAGCTGTTCATCTCCTGCAAGGGCTGCAACAAGGTGTTCCACTCCAAAAAGGCGTATCGGGCTCACGTCGTGATCCACGACGGAGTGACGTACCCTTGTCCGATCTGCGGGAAGCTGTTCCAGTGGAAACGGAACCTGGCGCGGCACACCAGAAACCACAGAGACCGAGACGCAGGCGCCACCCACGAATGCCGAGACTGCGGCAAAGTGTTCAGCAGCCGAGACTGCTACAACAACCACATGAAGCTGAGCAAACGGCACGTGCACGAGGACGCATACGCGCACACATGTTCGTATTGCGGCAAGAAGTTCGCGACCAAGTGGTGTATGGTGGACCACGTGGACTGGGACCACCTCAAGCGGATCAAGTACCAGTGCAGCGTCTGCTTCAAGGCATTTAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCATACAAGACTGCGAAGATAATGGTGGCACACATGAACAACATACACGAGGGGAGGAAGAACCGCGAGCCGGAGAGCGAGCACCTCTGCGAGATCTGTGGCAAGTCCTACAAGACTGTAAAAAGACTGAAAGGCCACGTATGGGCGATGCACACCAACCGCTCGACCACGAAAAGCTTCAAGTGCAAGCTTTGCCCAGCAACCTTCACCTGGCAGACCTCCATATACAAGCACATGAAGATGATGCACGACAACAAGCGGCCCAAGCAACTCCGGCCGCTACCGACGAAGAAGCTGGAGCCGTACCCGGGCGAAGCGGCCCGCCCCTACTTCCCGCAGCCACAGCTGCATCTGCCGCTCCATATCGCGTAG
Protein Sequence
MREININIEGYNVNGICVGCLNYNRKMYYCDQIKECLKLIGNIDVPDGLQVQVCWECLASVQAVLRFRNLIINSYNVLIDYSRQHTFLNSPADLSIHAHQRLSTTTTEVSTVQDSLMIEVDVSVVKEETKEEVPEDQDTYTETETVKSETEFFDNDNADFPQDDRASSEDDVQLSKLKKKKERRTKKVKKKRKEQKQRIKTNDVKTEQAQQPNKRKLKNLPSDLVELYTMTEEEMWQIRQEDVSSAEFCALKYKCENCIIGFNSEKLMNDHMQGKHVPKSPDCHQCDVCRAYFLTKDNVWKHRALHLAAYRCGACGARTALKRRMHRHAQAHRGQGAHCSTCGEHFSTKSKLTYHKGVCNQARPQCDCCGKVFANKMTLKYHLKLSEAKRKYYAWNEPSMQTAIEAVRKKDVGLNDAARKYGVPKATLKRRLDGSNQKAKEAVQIVGSEGDIPPQLEKELCDHVLNMERSLDYVKPIDIRRLAFDLAEKNNIKNRFSKEKRMAGKKWYYSFMKRHPELSPRQPRAMSRVTGFNKTVVKDFFDKLEAVMDKHEINDAQRIFNMDETGLSTVQRKPRKNIDQKGKQVVARKRGTTTTAVCCASAAGFFVLPLIIFKRKRAKDELRDGAPPGTIFAFNPVSGYINKDIFYLWLQHFVETVKPTPEKRVLLLLDASHTKNLAAVKFAKRHGVVILPFPAHIRKLRPLDVSFFKPLNLFYIDETEKWLRQHPGRTVTTFQVSMLFGKAYSRAAVGTASNGFTKSGIYPLNKDVFQDYEVIVPEEEIIHPRNLSTQEDPLAVNSPIKRELLEGYVESSPDNSRSVEVQSKTTAMEVIAEIHAERILPQNKDDKPKEKLFISCKGCNKVFHSKKAYRAHVVIHDGVTYPCPICGKLFQWKRNLARHTRNHRDRDAGATHECRDCGKVFSSRDCYNNHMKLSKRHVHEDAYAHTCSYCGKKFATKWCMVDHVDWDHLKRIKYQCSVCFKAFKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTAKIMVAHMNNIHEGRKNREPESEHLCEICGKSYKTVKRLKGHVWAMHTNRSTTKSFKCKLCPATFTWQTSIYKHMKMMHDNKRPKQLRPLPTKKLEPYPGEAARPYFPQPQLHLPLHIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00680921;
90% Identity
iTF_00680921;
80% Identity
iTF_00680921;