Epro015455.1
Basic Information
- Insect
- Eudemis profundana
- Gene Symbol
- -
- Assembly
- GCA_947034915.1
- Location
- CAMQQJ010000135.1:325734-328494[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3 2.4e+02 3.7 0.3 1 23 195 218 195 218 0.92 2 18 0.00022 0.018 16.7 0.6 2 23 224 245 223 245 0.97 3 18 0.00012 0.0097 17.6 1.0 2 23 276 298 275 298 0.96 4 18 0.63 51 5.8 2.2 2 23 363 385 362 385 0.95 5 18 0.0011 0.085 14.6 0.3 1 23 391 414 391 414 0.93 6 18 0.0071 0.58 12.0 1.1 1 16 418 433 418 435 0.93 7 18 0.015 1.2 10.9 2.2 1 23 448 471 448 471 0.96 8 18 0.024 1.9 10.3 0.5 1 23 476 499 476 499 0.93 9 18 8.4e-06 0.00068 21.2 0.7 3 23 513 533 511 533 0.97 10 18 0.00044 0.036 15.8 1.0 1 23 539 561 539 561 0.98 11 18 1.2 96 5.0 0.8 2 23 570 590 569 590 0.96 12 18 0.00023 0.018 16.7 3.3 1 23 600 622 600 622 0.97 13 18 0.18 15 7.5 0.0 2 23 627 647 626 647 0.95 14 18 0.059 4.7 9.1 0.1 1 23 663 685 663 686 0.96 15 18 4.9e-05 0.004 18.8 1.8 1 23 692 714 692 714 0.98 16 18 1.4e-05 0.0011 20.5 3.4 1 23 720 742 720 742 0.97 17 18 0.0059 0.47 12.2 0.2 1 23 748 771 748 771 0.96 18 18 0.11 8.8 8.2 0.4 2 23 777 799 776 799 0.95
Sequence Information
- Coding Sequence
- ATGGAGGAAGGGGAAACTAACATAACAGAGTCAATGGACGCAGAAAATGCagatataattataacaatgaAAGATTATGATGATTTTGATTACATCAGGGATAATCTTAAGAATGTATTGTACTCATCGCACTTCTGCGGTATCTGTCTTGCTGCTAGTGAAGATTTATGTCCCATTGCAATGGAGATGGAAGTGGTCACGCATAGAACCGCTGAGGTTAGAACTGTGGAAGATATTGTCAGCTATgtgtttaataataatGTCAAAGACATCCTAGTCAGCTCTTACACATGCGACACTTGCATTGATAAAGTGTTAGAGTCCTACATCTTCATAAAAAACTCCCGAGACTCATTCAAAGTCATAAACAACTGTATCAATGAGTTAAACTACAAAGCTGTCAATGCTATTGAACAGCTAAACCCCACAGATAACTATGAGAACTCGGAAGTTCTAATTATACTGGAAAATAATGATACCCCTTACATTGAGTATGTGGTCAAGGAATCAACAGTTAAAAGTAACACAGTAACTGTTAAGAAGAAGAAAGTTCAGAAGAAGACTTATAAAAAGCATGCTGGGTACCGGTGTGTTGAATGTAACATAATTGTTCAAACTTTCAAAGAGTGGAAACTGCATGAGAGGGATTTTCATGAAAAACCTCAAATTCAGTGTCAGATTTGTAACAAAATCTTAAGCACGGAGCAGAGCTTGAAAGTCCATTACAAAACACATGCGATGATGAAATGCAAAATTTGTCAATTGCTGGTGCCTGATGGGGATTTAAATGAACATTTTAGATTGAACCACGAAGATGATAAAAAGACTTGCCACATATGCAACCTGGCTTTTTACACAAACAGCGAAATTAACGCCCACATGAAAATAAGTCATCCTAATGCTGATGATCCTGATCCGTCTAATGTCAAGACACAATGTCAAATGTGCCTAAGACATTTTGAAGGGGAGGAACTAAATGAACATAAATGCAAGTTTAGGTGTTCTGAATGCTCAGAAATTCCTTGCATCCATCACAAATACTTGCTCTCTTATCGAGACCAAATCAGAGCAAGAGCATCAAAGATAAAATGCATGGACTGTGACTATGTGTGTCACAAAAAAGACTTTCTTATTGGACACGCAAATAGGGAGCATTTGGATCATATATCCTTTGCTTGTGATATTTGTGGCCAACGTTTCTATTCCAAGGTGGGCCTCCGAGGACATATCTATCAGTTCCATACAGAAAGTTATGTGTGTGAGTATTGTGACCAGGAGTTCAAGAATAgttcaaattactttgagaacCACAAAAAGCAATGTGCACTTGTTGAAAGAGAATTTAAATGTAATGAATGTCCGGCTTCATTTGAATCCTTTAAATTCCTCTCTAATCATAATAAGCGGAGACATATCCAGGAAATTTACCCTTGTAATCTATGCACTAAAACATTTTTGACTGAAGGTAAACTGAAAGAACATACAGTCAAAGTGCACAGTGGATTGCAAAATAGAAACAGGAGATCCTTTACTGACTGTGTTATATGTGAGAAAAAATTTGATACTAGAGCGGATTTGAAACGGCATATTAAAACGCATGGACCAGACGCAAAGTTCCCTTGTAGGACTTGCAATATAGAATTTGAGACACTAAGGCAACTGCAAGTCCATAGGAGAAAGCATGTCCGATCATATTGCGAACGAGTCCAATGTCCTACTTGTAATATGGAACTACAAGCCATCTGTTTGTCTCAACACATGCTACGTCATGCGGTTGAGTCTGGAGAAGCACCAGCTTTCAGTTGTGAAGTATGTGGAAAATCATGTTCTTCTAAAGTCTATCTGAAGTATCATAAGCTAAGCCACGAGCAACCAATACCTTGCCCGGAATGTAACAAACTGATTAAGCCAGCTGGCCTGCAGAAACATATCAAGTACCATGGCTATAAAGATGACCCAGTTATGAGGGAGAAAATGAAACGGAAATACAAATGTGAGTTATGCGAATACATAGCGTCAGATCCAAGCATATTAGAAGCTCATGTGAATCGTCATCATTTAAAAGTGAAACCCTACGTCTGCTCAATTTGCGAGAAAGATTTCTGCGGCAAATTACAACTTACACGACACATGGACACACATTACTTGACTAAAAATTTTAATTGTGAAGTTTGCGACAAGAGATTTTCTAATAAGATTTGTTTGCGGATGCATATGAGGCTCCATACGGGAGAGAGACCTTATTACTGCGAAATTTGCGCAGATAGTTTTATCTCGGCAAGCGCCTTGAAAACCCATAGAATCAAGCGGCATTCAGAGAAAACTATACCTTGCCCATTCTGTAAGCGAATGTTTTATATAGCAGTGGAAATGAGACAGCATTTCAAGAAATACCACTGGCCGCATAAAGATAGGAAGTTTGACCATAGAGAAGTAGAGGGGCTGGGTAGGGAGTACTATCATCTGTTTGAGGATGGCAGAAGACCAAGATTAGACGAAGATACTAATTATGAAGACACTAGCAATATCATAATAGAGGAAGTAAATGACTAG
- Protein Sequence
- MEEGETNITESMDAENADIIITMKDYDDFDYIRDNLKNVLYSSHFCGICLAASEDLCPIAMEMEVVTHRTAEVRTVEDIVSYVFNNNVKDILVSSYTCDTCIDKVLESYIFIKNSRDSFKVINNCINELNYKAVNAIEQLNPTDNYENSEVLIILENNDTPYIEYVVKESTVKSNTVTVKKKKVQKKTYKKHAGYRCVECNIIVQTFKEWKLHERDFHEKPQIQCQICNKILSTEQSLKVHYKTHAMMKCKICQLLVPDGDLNEHFRLNHEDDKKTCHICNLAFYTNSEINAHMKISHPNADDPDPSNVKTQCQMCLRHFEGEELNEHKCKFRCSECSEIPCIHHKYLLSYRDQIRARASKIKCMDCDYVCHKKDFLIGHANREHLDHISFACDICGQRFYSKVGLRGHIYQFHTESYVCEYCDQEFKNSSNYFENHKKQCALVEREFKCNECPASFESFKFLSNHNKRRHIQEIYPCNLCTKTFLTEGKLKEHTVKVHSGLQNRNRRSFTDCVICEKKFDTRADLKRHIKTHGPDAKFPCRTCNIEFETLRQLQVHRRKHVRSYCERVQCPTCNMELQAICLSQHMLRHAVESGEAPAFSCEVCGKSCSSKVYLKYHKLSHEQPIPCPECNKLIKPAGLQKHIKYHGYKDDPVMREKMKRKYKCELCEYIASDPSILEAHVNRHHLKVKPYVCSICEKDFCGKLQLTRHMDTHYLTKNFNCEVCDKRFSNKICLRMHMRLHTGERPYYCEICADSFISASALKTHRIKRHSEKTIPCPFCKRMFYIAVEMRQHFKKYHWPHKDRKFDHREVEGLGREYYHLFEDGRRPRLDEDTNYEDTSNIIIEEVND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01072852;
- 90% Identity
- -
- 80% Identity
- -