Epro002528.1
Basic Information
- Insect
- Eudemis profundana
- Gene Symbol
- -
- Assembly
- GCA_947034915.1
- Location
- CAMQQJ010000023.1:1061714-1097967[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-11 7.9e-08 33.1 0.1 7 48 188 231 184 234 0.83 2 2 3.1e-12 2e-08 35.0 0.1 28 70 234 272 229 277 0.88
Sequence Information
- Coding Sequence
- ATGTCGGACGAAATGGCGGTTAGTGATAACCCAAGTGGAGAAGAAGCTGTCGTAAATGGAGCCGAGGTGTTGGCAGCGAGTGCCGAGGATGCGGCGCCGGAGGCCCTGGAGCCTACGAGCGCGCCTGCGGATCCGGATCACGAAGAACCCGTGCGAATCAAGACAGAGCCCGAAAGTACAGAAGATCCCGAGCCTATGGAGGAGGATGACAAGCGGGGTGTAAAGCGCAGGGCATCGGCAGCCTTCACCAATGAAGGCACTGAGGACTTCAAGGGCTTCGTGAAGAGTGAATTGGATGACTCTATAGTGGAATATCAGCGAGTACTGGAAAATCTGGAGGCAGAGGTGGCTGCGGCTAGTAAAACCGCAGTGCCTCTCCGGACCGTGATGGGGACACCTACAGCCCCGGCCAGACCCAGCAAGCGGGCCAGgcaggacacagacGGATCGAGACCATCATCTGCCCAGTCCACCAGGTCTGACGGTGAAGGAGTTGTTTCTTCCACTGAGTCACCCGCAGTCAAGGGCCGCCGGGCGACCACAGAGATGTCATCCCCCCTCCTACGGGTGCCGCTCGAGAGGGGCTGGAAGCGGGAGCTCGTGTACCGCGCCGCGCTCGACCAGCACTCGCGGCGCAACGCCGACATATACTACTACACGCCGCAGGGAAAGAAGCTGCGCTCCACTAGAGAGCACTCGCGGCGCAACGCCGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACTAGAGAGGTAGCGGAATACCTCTCTGGAACCGGGCTGACGTTAGAGAACTTCTCTTTTTTCAAGGAACCACTGGGTGTAGACGACCCTGATAAAGAAATCATTCGTGACGCGAAGTTGATGCGGCGAGTGGAGTCGCCGGTTGCTCAGACGGCGCCCGCGGCGGAGGGCAAACGCACGCCGAAGCCCAAAGCGCCGAAGGGCGCCAGCCCGGAGCCACAGACCCCGAAATCACCGCCCACTAAAATCAAGGTGAAATCGATGCAGCCCCGCCTCAGCCGCACGCCGTCTACGCCGGCCGCAAAGAAaccggcgcccgcgcccgccacAGACAACAACAACACACAAGCGTGGAGGAAAAACAGAACGGCGCCGGCGCCTGCCCCCATTGCCCCCGCGGCCCCAGCTGCCCCTGTGGCCCCCGCTACAGTAGCCCCTGTGCCCGCGGCACCGGTGGTGCCctcgccggcgccgccgccccCGCTCCACAGCCGGCCGCCCGTCTCGCCGGTTGAAGCGAAGATTGACAAGCCGGACATGACGTCCCCGCGCCAGTTGCTCCAGCCGTGCTCCATGACGTGCGGCCGCGGCGTGCCGTCGCTCGCGTGCGGCGCGTGCCTGTGTCTCTACCACCCCGCCTGCGTCGGCCACTTGACTCCGCGCCCGCCTGACACGTTCTTCTGCAAGAACTGTCGCAAATCAAGCTCCCCGACATCAGAGCCGCCGCCGCTGACGCACAAGACCGGCGCGATGCCGGGCGCgctgccggcgccggcgccgcgccgcctgCCGCTGCCCGTGCCCGTGCCTGTGCCCGTGCCGAGGCCCAGGCCGGACAAACGAGTGCTGCTCAGGATGAAGGTGGCGGGCGGCGGCCCAGACGGCGAGCGTGTGTGGGCGGTGGCACccccgcgcgccgcgctgcgccCCACTCTCCCCCAATCGCTGGCCGTGCTCAACGGGAGAAGATTTATCGTGGTGCCACGGGCGCTAGTTCAGCCCACCACGCAACCTGACACGAAACCGGTGTTGCGGGGTCGAGTGGCGAACGGCGCGACGCCGGCGGAGGCCTCCCCCcgccgccgcggccggcccAAGGTCGAGGACACGGACCACTTCACTGCGTTCTACCATAAGGCGCAGGAGCGGAAATACAACGTCGTCGTACAGATCTTCCAATACCTGGGCATGCGGGACCTGGCGCACTGCGCGCGCGTCTGCCGGCTGTGGCGCGAGCTCGCCGCCACGCCGCAGCTCTGGCGGCACGTTAGGATGAAGAACTCACACGTGAGCGACTGGGGAGGATTGTTCGCGGCGCTCCGGCGGCACGGCACGCGGCGGCTCGACCTGCGCAAGATGCTGCTCCCGCAGAACGACGCCGCCTTCTGGGACCAGTTCACCGAACACGTGCAACAGCTCGACCAACTAGAGAGGATAGAGATGTGCCGCTGCCCGGCGAGCGCAGTAGAAGCCGTGTGCCGCGGCGTCACGAACCTCAAATCGCTGTCCGCTCTCGCCATCCGCTCCGCCCTGCTCGACCCCGCCCCCCTCGGCGCGCTGCCGCAACTGCACGAGTTGCGGCTCAAGAGCATGGCGGGGCTGTCGCTCACGAGGGACCTGCAGCCGCTTGCGGCCCTCACCAGGCTCACGCATCTCTCGCTCACCTCCATCAAGGAACTAGGTTGGTGCGCGTGCGACGTCGTCGGCCAACTCCCCCAGCTGGAATCCCTCGAGCTCGGCGAGTGCAGCTTCCGCGCCGAGTTCGCGCTCGTGCTGGGCAAGCTGTCGCGGCTGCGGCGCCTGCGCCTGGAGCGCGGCACCGCGCAgtgcgccgcgcccgcgctGCTGCGCGCGCTCGCTCTACTGCCGCAACTCACCAGCTTGGAGCTCGTCAACTTCGATGTCAAGGTCGGGTTCGACGACGCGCTGGCAGAGTGCAAGAACATACAGAGGCTGCTCATCATACCGACATACGTGTCTCAATCCGCCACCACCAACAAGCAGGTGCTAAGCGGCGTGCTGAGACTCAAAGACACCCTCACGCACCTAATGTGGGGCGTCACCATAGAGCTGCTCCGCGTCACAGAGCTGTTCATCGACCAGTGCCAGCAGGGCACCGAGCGCCGCCGCGACGTCGGCGAGTGCATACCCGTGCTCAAGCCCGTGCCCGGGTGCCGCCTGCAGCCCGAGGCCGAGGCCGAGGCCAAGCAGGAGCAGCGCACACCTCCGCAGCCCGAGGCCGAGGCCGAGGCCAAGCAGGAGCAGCGCACACCTCCGCAGGTaccgtgcgtgtgtgtgtgtgtgtgtgtagcgaCGTCGGCAAGTGCATACCCGTGCTCAAGCCCGTGCCCGGGTGCCGCCTGCAGCCCGAGGCCGAGGCCGAGGCCAAGCAGGAGCAGCGCACACCTCCGCAGGTaccgtgcgtgtgtgtgtgtgtgtgtgtgtagcgaCGTCGGCAAGTGCATACCCGTGCTCAAGCCCGTGCCCGGGTGCCGCCTGCAGCCCGAGGCCGAGGCCGAGGCCAAGCAGGAGCAGCGCACACCTCCGCAGGTGGAGATACTCCCGCTGCCCACACTGCAGCGGCTGCTGTCCGCGCAGCTGCCGAACACGAAGCTGAAACTCCTGCGCATCCCGTTCCACGCCACCTGGCGGCAGTCGCTCGCAGACTTCCAGTAG
- Protein Sequence
- MSDEMAVSDNPSGEEAVVNGAEVLAASAEDAAPEALEPTSAPADPDHEEPVRIKTEPESTEDPEPMEEDDKRGVKRRASAAFTNEGTEDFKGFVKSELDDSIVEYQRVLENLEAEVAAASKTAVPLRTVMGTPTAPARPSKRARQDTDGSRPSSAQSTRSDGEGVVSSTESPAVKGRRATTEMSSPLLRVPLERGWKRELVYRAALDQHSRRNADIYYYTPQGKKLRSTREHSRRNADIYYYTPQGKKLRSTREVAEYLSGTGLTLENFSFFKEPLGVDDPDKEIIRDAKLMRRVESPVAQTAPAAEGKRTPKPKAPKGASPEPQTPKSPPTKIKVKSMQPRLSRTPSTPAAKKPAPAPATDNNNTQAWRKNRTAPAPAPIAPAAPAAPVAPATVAPVPAAPVVPSPAPPPPLHSRPPVSPVEAKIDKPDMTSPRQLLQPCSMTCGRGVPSLACGACLCLYHPACVGHLTPRPPDTFFCKNCRKSSSPTSEPPPLTHKTGAMPGALPAPAPRRLPLPVPVPVPVPRPRPDKRVLLRMKVAGGGPDGERVWAVAPPRAALRPTLPQSLAVLNGRRFIVVPRALVQPTTQPDTKPVLRGRVANGATPAEASPRRRGRPKVEDTDHFTAFYHKAQERKYNVVVQIFQYLGMRDLAHCARVCRLWRELAATPQLWRHVRMKNSHVSDWGGLFAALRRHGTRRLDLRKMLLPQNDAAFWDQFTEHVQQLDQLERIEMCRCPASAVEAVCRGVTNLKSLSALAIRSALLDPAPLGALPQLHELRLKSMAGLSLTRDLQPLAALTRLTHLSLTSIKELGWCACDVVGQLPQLESLELGECSFRAEFALVLGKLSRLRRLRLERGTAQCAAPALLRALALLPQLTSLELVNFDVKVGFDDALAECKNIQRLLIIPTYVSQSATTNKQVLSGVLRLKDTLTHLMWGVTIELLRVTELFIDQCQQGTERRRDVGECIPVLKPVPGCRLQPEAEAEAKQEQRTPPQPEAEAEAKQEQRTPPQVPCVCVCVCVATSASAYPCSSPCPGAACSPRPRPRPSRSSAHLRRYRACVCVCVCSDVGKCIPVLKPVPGCRLQPEAEAEAKQEQRTPPQVEILPLPTLQRLLSAQLPNTKLKLLRIPFHATWRQSLADFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -