Basic Information

Gene Symbol
-
Assembly
GCA_963930755.1
Location
OZ005734.1:269108441-269120771[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00021 0.024 16.7 0.7 1 23 181 203 181 203 0.95
2 15 0.26 29 6.9 1.8 3 23 211 231 209 231 0.95
3 15 0.00017 0.019 17.0 0.5 1 23 411 433 411 433 0.98
4 15 0.0011 0.13 14.4 0.3 1 23 439 461 439 461 0.99
5 15 1.2e-05 0.0014 20.6 2.9 1 23 493 515 493 515 0.98
6 15 0.018 2.1 10.6 0.3 1 23 537 559 537 559 0.94
7 15 0.028 3.2 10.0 0.4 1 23 565 588 565 588 0.97
8 15 0.58 66 5.8 0.3 5 19 599 613 596 614 0.91
9 15 0.00034 0.039 16.0 5.6 1 23 623 645 623 645 0.97
10 15 0.076 8.7 8.6 1.7 2 23 651 672 650 672 0.97
11 15 2e-05 0.0023 19.9 0.3 1 23 681 703 681 703 0.98
12 15 0.01 1.2 11.4 0.2 3 23 711 731 709 731 0.97
13 15 0.00012 0.014 17.4 0.5 1 23 737 759 737 760 0.95
14 15 0.0057 0.65 12.2 0.0 1 23 770 792 770 792 0.97
15 15 0.01 1.2 11.4 0.0 1 20 1393 1412 1393 1415 0.93

Sequence Information

Coding Sequence
ATGGATGGACAATATGGTGGCATACAATGGATTAGTTCCGTGAATCATCATGACTTGAAAACTGCCGGTCAGTTGGTTATTGATCCCCGTTCTGAAGAGGATCTCAATTCATCCTGCGGTCCGACGGAAGATGATGAGGCTGACGCCTCCAATATTGATCAGATTGCTGCGGAGAACTTGATTTTCATGGCTCGCGATGCCCAAATACTGTCGACAGCAAATGGAACACATGGTACAGTGGTTGTGACCACCAGCGATGGTGAACAAATTGATTGTGATGCTATTATGGAGCAGGCTGCCTTAATACAACAGCACGAGGACACGGGTGGTGGTGGCGATGAAGTGTACACCGTGGATCATTATACAGACACAACACCGCAAATGGTCACCGAAGAAGTCATCACCGACGATTGGGTCCAACATCAAGGAGAAGAAAGAGTTGAAATATCTGCcgaacaaattatttcaaattctcAAGTATTAATGGACAATGAAGTACCCCTGCCTACTATACAAGATGAGTACACTGCCTTGCGGCCGTATCCATGTGATTTTTGCAGTCGCCGTTTTCGCAAAAAAGCCAGTCTGATGAATCACATGGTGGCCCATCAGAACGATCGACCACATTTGTGTAAATTGTGTGGTTCTCGTTTCCTGCGCCGGCAGGATTTAATCAATCATTTGAAGGCTCATGCCGAAGAGCCCATCAATGAGCCACAAATGGATGACAGTGATTTCATACACTTTGTTACCGATACCACCTCATCATCGCAACGCACATCCAACGATCATTATTATGAACAAGATTGGAGTGTGCCCGAAGATTCCGTTACAATACCAATAAAATCTAGTCGTAAacaataccaacaacaaactaCCTCCCATCAGATAAGCGGTAACCACAATAGTTTGATGGAAAACAATTCTCTATCACATACGTCGACAACGACGACTGCCCCACCCAGAGGTCGCATAAGTCGCCTTAAGCCCAAAGAGGAGACGTATGTGGTAGATGTTTCCAATAATTGCACTTCGAACAACACTATCAATTTGGCTTCGACTTATAGTATTGTCCAGTGTGATACTTTAACAGAGTCCACTGTAACCGCTATAGAATATACTCAGGATGCAACGTCACCCGCCCTGCAACAAACTACACAAGAACAGCAGCACCAGCttcagcaacaaaaacaaataatacaTTATCCCGTGATTGATGATAACAAACCGTTTGTATGTCAAGAATGTGGTCGGGCTTTCTCGCGAGAGAAAGCAATGCTTTCGCATTCTAAGACCCATCGCAATGATTCTCCATTCGAGTGTCCGCAATGTAATGAATTGTTTTGGGATCAAAACAGTTTACAGGATCATCAGAGAACACATCAGTTCGAGGAAAGTAATTCTGAATATGATCCAAATGAGGGAGAAGACGAAACACAAAGTGAATCAGAGTCCGAACAACAATTATATGGAGAATTTTATTGCAGTGAATGTGGCATGTCTTTCCATCGTCAAGATCTGCTGCGAAGACACGCCAAAACTCATGCAAAGGGCAACAATCAAGGTGTTCATCACAACGGTGCTGAAGGTGACAACCCGAAGGATCAGCACTGTTGCAATACCTGCGGTGAAACATTTGCCGAAGCTTTGGATTTATTGGCTCATGCAGAGATACATGCCCGTTATCCGCCATTCAAATGTGTTTTATGCGGCGAATCCTTTTTCGAAGAGCCCACCATTAAGAAACATTTACAATCTCAACATGCAAATGAAATGACTGAAAACTCATGTATTCTGTGTGGCAAAGAGTGTCGAGATCGTAAAGCTTTAATCAAACATGCCTGGGACCATTCGCGTGAGAAATGTCACTCGTGTTCGAAATGTGGCAAAAATTTCCACAATAAGGCTCGTCTCAAGCGTCATATGGCTTCGCATCGTGACAAATCGGTACAGTGCGATGTTTGCCACGAGGAGTTTCCCGATGGTCGCACCCTCTCAAATCATCGACACTCTCATAGTACCACTTCGGCGGGAAAATTGTTTCCCTGTAATGAATGTGGTAAAACCTTTGGATCGCGTAGCTCACAACAAATACATGTACGCATCCATACGGGTGAGAGACCTTATGGATGTCGGTTTTGTTGGAAAGCATTTGCCGATGGTGGTACTTTGAGAAAACACGAACGCATTCATACCGGCGAAAAACCTTATGCTTGTTCTGTTTGTCCTCGAGCTTTCAACCAACGTGTTGTGCTGCGCGAACACATTAGATCACATCACTCGGGATTGGATACGAAGAGGGGAACCTATTATTGCACCGTTTGTGGGGCAGATTTGTCTTCATCGGGAGATTTGATTCAACATTTGATACAACACAGTGACATGAATACTGCTATGCAAAGACAGCCTGTGactgGTCCCCGGAAATACAAACGCAGACGCAAATTGAAGCCACATGAAATTGCCCGTTTAAAACGCGAATCCAAGCAGAATGGTGGCAATAGCAGTGATATCGATTTATCCGATTTCGATATGGATAACGTTGATGACCTGTTAGCAATGACAGAGACAAACACTTCTACAGAGAATACAACCAGTAACCATGAGCTTCCAACAATCGGCAAGTCGTCTAGCCGGCAAAAAAATAGTAATTCATCGGTTGATATAATAGAAACCAATAACAATCGGAATAAATCATCAGCCACAGCCTCATCATCGTCTAAGAAGAAATCTAAAATTGTATTGGATCCAGATGATTTTGATCTGGATGTGGGCATGGATGGCGAGAGTCCCAAAAAGGCCAGATTCAATTCGACAAGTAGTGATAAAATTTGGTCAACGAAAACCTCCAATGAGGAAACTTATAAATCACTATTGTCCAATTTGGAAACTACTCTACAAAGTATAGATACTCTAGTGGTGGGACCATCATCATCGAGCACTATGGAAATGATCACTTCATCTGGAAATGGAAAGCGCAAGTCTAAGCATGAATCTACCACACAAAGGACACAACCGGTACAAATTATGAGATCTGATAAAGAAAGTGCCACGAATAGCACCAGTGGTAGGGGACGTAAAAGTAAAACCGAGAAGGCTGGCAATAAACAAGCATCTAAGGGTCCCCAGATGATACGCACCGAAAAGTGTACCGTGTCATCGATGGAGGGTGGCAAAAAGAAATCCAAATCTGTTGTCACCCGCACTCAAACTACCAATATTGAAGTAATGCCCAAATCTGTTGGTATCGTAGATGATTATGACATTATTTCACCAGCTTTGCAGCCGCCCAAACAAATCAGTTGCAGTCCTTTACACATTAAACAGGAACACGACCATCACCATTCGATGAAGAGTCATAACCATCATCACCACCATGTGATGTCCTCCTCATCTTCGAACTCAGTGGCTCACAATAGAACACAATCGTCTAATACCCGCCATAATAATGATATATACGATGCCCATCTATTACTCGAGGCCTCTGGACTGCGCaatgatcttgatgaaattttgagATCTCCTCTAAAATCCGATAAATTGGGAAGTTCACGACAACGTTTTACTAGTGAATCGTCGACACAATTTCTCGCAGAACAATCTGAGGAAGAGCAACATTTAATCAAAATTGAACCCACCTCTCCGGATCTAAGAGAAATTGTCAATGGCGTCAGTTCGGTTAACACATCAGAGGTGGTAACCTCAGCGGGCATGGAACTTAATGTTAGTACCCCACAATCACGTCGATCCACCAAAGCATCGCGATCTCAAAGAAGTTCAAATTCGAgtagaaaatattttgaattttctactGAACACCATTTAAATGAACCCAAAAGTGGCAGTAGCAGTACTGCGTCGTCATCCCACAAAAGATCGTCCTCGTCTTCTACTAATATGTCTATAGTTTCCTCCACCCCCACAAAAACCTCTAAAGCGGCCCGTACTGAACCAACGAAGCCCTCAAAATTAGTACAGAATCCAACCTCATTTCTGGACTATGCCATAGTGGACAGTTTCAATGCGGTTACTAGTTCCTCGCCCACACATCATCACAATGCCAATTCATTTGCTTCTATATCGGCTGTGGTATCAGCAGCAGATGCCACTGCTGCCGCTGTCTCTGCGGCAGCAGCTCAACAGAATCCTTCGCCTACCCGCAAACCTCAGCGTTACTTTGAGTGTGAAATGTGTTCAGCTGTATTTTCGGATCGTGCTCAACTCTTGGATCATGTGCCCATACACATTTAA
Protein Sequence
MDGQYGGIQWISSVNHHDLKTAGQLVIDPRSEEDLNSSCGPTEDDEADASNIDQIAAENLIFMARDAQILSTANGTHGTVVVTTSDGEQIDCDAIMEQAALIQQHEDTGGGGDEVYTVDHYTDTTPQMVTEEVITDDWVQHQGEERVEISAEQIISNSQVLMDNEVPLPTIQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQNDRPHLCKLCGSRFLRRQDLINHLKAHAEEPINEPQMDDSDFIHFVTDTTSSSQRTSNDHYYEQDWSVPEDSVTIPIKSSRKQYQQQTTSHQISGNHNSLMENNSLSHTSTTTTAPPRGRISRLKPKEETYVVDVSNNCTSNNTINLASTYSIVQCDTLTESTVTAIEYTQDATSPALQQTTQEQQHQLQQQKQIIHYPVIDDNKPFVCQECGRAFSREKAMLSHSKTHRNDSPFECPQCNELFWDQNSLQDHQRTHQFEESNSEYDPNEGEDETQSESESEQQLYGEFYCSECGMSFHRQDLLRRHAKTHAKGNNQGVHHNGAEGDNPKDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEEPTIKKHLQSQHANEMTENSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSTTSAGKLFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDTKRGTYYCTVCGADLSSSGDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHEIARLKRESKQNGGNSSDIDLSDFDMDNVDDLLAMTETNTSTENTTSNHELPTIGKSSSRQKNSNSSVDIIETNNNRNKSSATASSSSKKKSKIVLDPDDFDLDVGMDGESPKKARFNSTSSDKIWSTKTSNEETYKSLLSNLETTLQSIDTLVVGPSSSSTMEMITSSGNGKRKSKHESTTQRTQPVQIMRSDKESATNSTSGRGRKSKTEKAGNKQASKGPQMIRTEKCTVSSMEGGKKKSKSVVTRTQTTNIEVMPKSVGIVDDYDIISPALQPPKQISCSPLHIKQEHDHHHSMKSHNHHHHHVMSSSSSNSVAHNRTQSSNTRHNNDIYDAHLLLEASGLRNDLDEILRSPLKSDKLGSSRQRFTSESSTQFLAEQSEEEQHLIKIEPTSPDLREIVNGVSSVNTSEVVTSAGMELNVSTPQSRRSTKASRSQRSSNSSRKYFEFSTEHHLNEPKSGSSSTASSSHKRSSSSSTNMSIVSSTPTKTSKAARTEPTKPSKLVQNPTSFLDYAIVDSFNAVTSSSPTHHHNANSFASISAVVSAADATAAAVSAAAAQQNPSPTRKPQRYFECEMCSAVFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00816753;
90% Identity
-
80% Identity
-