Ecya024976.1
Basic Information
- Insect
- Eudasyphora cyanicolor
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963930755.1
- Location
- OZ005736.1:27274072-27299036[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.42 2.4e+04 -4.1 1.6 33 59 168 192 159 225 0.47 2 3 1.5e-114 8.6e-110 368.4 26.5 1 299 267 566 267 567 0.92 3 3 0.06 3.4e+03 -1.3 3.5 220 244 595 619 570 640 0.47
Sequence Information
- Coding Sequence
- ATGCATAAGCTAAATAAaattaGCAATAAcgtcaacaacaataacaacgaaaaCGAGGAAAAAATTGTTGTAAACGATGAAATCATCGAGGAGTTCGATTTCAGTGATAGTGATTTGGCCGAACTCAATGCTGCATCGTCGTTGTTGTCGCCGCCGCCGCCGTCGTCGTCTGGTGGAGACATCAACAACAAAGTGCTGGCAATAGAAGAAGGCGAAGAGGCGAAAGAGGAGACATTAGTGGTGATGGGAGTGGAGTGCAGTGTACAGCAGCAAGAGCATACCATTGCCGCCAGTGATAACGACGAACAGGTGGGAGAAACATCAATGGCAGCAGCAGAAATCACCACTGATAACAATGATAAACACGAACTGTCTTCAACAACACCAGAAGCagcaacaacaccaccaccaccaccgccacaaCCTCCAACCGCAAACAATGAACAAGAAGAGGGGCAGCCCATCTTTCTGCCGACTAAGAATACCAATGAAACTGAAGTAAGCAAAGACGAAAATGTGAATTCAACTCAAGATATCGCCACCACCACCAATACCAACACCACCTCCACCCCCACCATTTCCCTGACTGACAAAACACCACCAACTGAAATGGCAACAATGATGGATGTAAAGTCCAACCAAACATATGATTCTTCGAGTGCAGCCAATGCCGTTGTCGCTGCAGCAAACGATGAATGTGGCAgttacgacgacgacaacgacgacaatGGTTCCGAGTACATTGACGAACCATACGATGAACTTTTAGTTCAATTTCTTGATGAAGCCAATAATATTGCTGAAGCAAGGTTAGCGGCCCGGAGACAGGCCAGGGCAGAAGCTCGCGAGATACGAATGAGAGAGCTGGaacggcagcagcaacaacaggagCTAAATGCCGATAGAGTATTCGATATGCATACAACGGCATCGGGCATCGATCCTCTGTCTCGAACACGGTTGGGCATGGGCAGTGCATCACCGGCTATTAGTGGCTTATTAAATTCAACACGAGGCGGCAACTCAATGTCTTCAAGACGCAGCAGCGAAGATTCTCTGGAAGAGGAAGGACGCAGTTTAAGAGATATTCGCCATGAGTTGAAGGATGTAGAAGAACGATTTCGTAAGGCCATGATAGCTAATGCGCAATTGGATAATGAGCGTGCTTCACAGACTTATCAAATACAATTGCTAAAAGACAAGCTAGAAGATATGGAAGAGTCTTATGCCCAGCTGCAGCGTGAATTCAAGGAAAAATCACGCGATTGTAATGCCCTGAAGCGTTCATTAGACAAGTTGGGTGAAGAATTGAAACTTGTACAAGGCCAACTAAATGAGCGAGACACACTTATAGCCGAACAAGGTTTGGTTATTGTTGCTGTCGAAAACGAGGATGGCACAGATGCCAAGCGTGCTCTAGTCAGCGTagaaaatgcacaattattaggTTCAGTTCAGGGTTCTTTAGATGTACGACTTAAGAAATTCACCGAAGAGAAACAGCAATTACAGTCAGAAGTCCAACAGTTGCAAGAACAAATGGAAACATACAAAAGTCAAGGCAAAGGAAGAGGTCGAGGAAATTCTCTAAATGGTCCGCTAGGTTCAGACGATGATGATTATGAAGCTCAGAGAGAAGCCAATAAAATTATATCGGATTATAAGTATAAATTACAAAAAGCTGAACAAGAAATTGCTAGTCTCCAATCAAGTTTGGCTCGTTCCGAAACACAAGTTATACGCTATAAAAGCACTGCAGAGGCTGCAGAAAAGGCTGAAGCAGAACTCAAAATTGAAAGGAGGAAACTGCAAAGAGAGAATCGAGAGGCCATGGAAAAACTTGAGGAACTTGAAACGTCGAACAATCATCTAATCAAACGCCTAGATAAGCTAAAGAATGCCAAGAGTGCTCTTCTCAAGGATCTTTGA
- Protein Sequence
- MHKLNKISNNVNNNNNENEEKIVVNDEIIEEFDFSDSDLAELNAASSLLSPPPPSSSGGDINNKVLAIEEGEEAKEETLVVMGVECSVQQQEHTIAASDNDEQVGETSMAAAEITTDNNDKHELSSTTPEAATTPPPPPPQPPTANNEQEEGQPIFLPTKNTNETEVSKDENVNSTQDIATTTNTNTTSTPTISLTDKTPPTEMATMMDVKSNQTYDSSSAANAVVAAANDECGSYDDDNDDNGSEYIDEPYDELLVQFLDEANNIAEARLAARRQARAEAREIRMRELERQQQQQELNADRVFDMHTTASGIDPLSRTRLGMGSASPAISGLLNSTRGGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEDMEESYAQLQREFKEKSRDCNALKRSLDKLGEELKLVQGQLNERDTLIAEQGLVIVAVENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFTEEKQQLQSEVQQLQEQMETYKSQGKGRGRGNSLNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLIKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -