Basic Information

Insect: Eucriotettix oculatus
Gene Symbol: -
Assembly: GCA_034510155.1
Location: CM067376.1:3463599-3465290[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.7 2.5e+03 -0.0 0.1 21 44 32 55 25 58 0.87

2 13 3.9 2.7e+03 -0.1 0.0 22 52 61 91 56 93 0.85

3 13 0.5 3.4e+02 2.8 0.0 23 44 118 139 114 143 0.90

4 13 0.18 1.2e+02 4.2 0.0 21 44 144 167 139 171 0.86

5 13 0.013 8.8 7.8 0.0 21 51 172 202 167 204 0.86

6 13 0.81 5.5e+02 2.1 0.1 20 44 227 251 215 255 0.83

7 13 0.0036 2.4 9.6 0.1 20 49 255 284 243 289 0.79

8 13 0.006 4.1 8.9 0.1 21 46 312 337 305 343 0.86

9 13 1.4 9.5e+02 1.3 0.0 22 51 341 370 338 372 0.85

10 13 0.011 7.2 8.1 0.0 21 52 368 399 362 401 0.88

11 13 0.93 6.3e+02 1.9 0.6 21 45 452 476 446 484 0.84

12 13 7.5 5.1e+03 -1.0 0.0 23 46 482 505 475 512 0.80

13 13 1.7 1.2e+03 1.0 0.1 21 44 508 531 500 535 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.7	2.5e+03	-0.0	0.1	21	44	32	55	25	58	0.87
2	13	3.9	2.7e+03	-0.1	0.0	22	52	61	91	56	93	0.85
3	13	0.5	3.4e+02	2.8	0.0	23	44	118	139	114	143	0.90
4	13	0.18	1.2e+02	4.2	0.0	21	44	144	167	139	171	0.86
5	13	0.013	8.8	7.8	0.0	21	51	172	202	167	204	0.86
6	13	0.81	5.5e+02	2.1	0.1	20	44	227	251	215	255	0.83
7	13	0.0036	2.4	9.6	0.1	20	49	255	284	243	289	0.79
8	13	0.006	4.1	8.9	0.1	21	46	312	337	305	343	0.86
9	13	1.4	9.5e+02	1.3	0.0	22	51	341	370	338	372	0.85
10	13	0.011	7.2	8.1	0.0	21	52	368	399	362	401	0.88
11	13	0.93	6.3e+02	1.9	0.6	21	45	452	476	446	484	0.84
12	13	7.5	5.1e+03	-1.0	0.0	23	46	482	505	475	512	0.80
13	13	1.7	1.2e+03	1.0	0.1	21	44	508	531	500	535	0.87

Sequence Information

Coding Sequence: ATGTACAATGTTGGAAAATCttacaaatgtgtagagtgtaATACAGAATTCTCACATTCACTGTATTTGAGGAAACACATGAACATCCACACCGGAGAAAAACCATACAgttgtgttgaatgtgatataGTATTCTCACAATATGAAAGATTAACATACCACATGAAAACTCACACTGGTGAAGGGCCATACATTTGTGTTGAATGTGGTAAAACATTCAGATTGTCTTCAGACTTGACAAGCCATGTGAGAATACACAGTAGTGAAAAACCATTCAGTActgttgaaagtaataaaacatttagacAAGCCTCATTTTTAACAAGACATAAGGGAATTGACACCGGTttaaaaccatacaaatgtgtcgaATGTTTTAAAGAATTCTCACAATCCGACCCTCTCAGAAAACATATGAGATCCCATACAGGTGAAAgaccattcaaatgtgttgagtgtgataataCATTCTCACAATCCTCAAATTTAGCAAcccacatgaggactcacactggtgagaaaccattcaaatgtactgtgtgtgataaaacatttgcaCAATCATCAAACGTAAAACttcacatgaggattcacactggtgagaaaccatacaagtGTGATGAGTGTGATAAAGCATTTGCACAAAGGTCAGGCTTAGTACAGCATAGgagaattcacactggagagaaaccatataaatgtgccGAGTGTTATAAACTCTTTTCAAATCCTTCAGCGTTAAAAAGTCATATGAGAACTCACACTGGagagaaaccatataaatgtgttgagtgttataaaatattttcaaattcctcAACCTTAAGAAGTCATATGAaaactcacactggtgaaaaaccatatatATGTGCTGAGTGTAATAAAGCATTTTCACAATGGTCAGCCTTTGTAAGACACAGTAGGatccacactggtgaaaaaccatataaatgtgttgagtgttataaaatattttcagattcatCATCCTTAACGaggcacatgagaattcacacaggtgaaagaccattcaaatgtgttgagtgtgataacaCATTCTCACAATCCTCTGATTTAATAAcccacatgagaattcacactggtgagaaaccatacaaatgtaaTGAGTGTGATAAAACGTTTGCACAATCATCAAACTTAAAATGGCACCTGAGGATACACACTGGGGACAAACCATACAGTTGTGTTGAGTGTAACAAAACGTTCTCAAGATTCTCATCTTTAAGGATGCACATGATGTCTCACACTGGTGGAAGACCCTACAAATGTCTTGCGTGTGGTAAAACATTCTCTCAATTCTCATTATTAACTACACATAtaaggactcacactggtgagaaaccctACCAATGTATTGAGTGTCACAAGTCATTCGCAGAGTGTTCAAATTTAAGACAGCACCAGAGGACCCACTCTGGTGTAAAACCGTACAGATGTGTTGAGTGTAATAAAACGTTCTCTCAGCCATCAAATTTAACAAgccacatgaggactcacactggtgagaaaccttataaatgtgttgaatgtgataaaacattcagaCGTTCTACACATTTAACAGCCCACATGAGAACTCATACTGGTGAGAAACTATACatatgtgttgaatgtgataaagcaTTCTCACTAGCCTCAAAGTTAAAGGAACACATGAGGATCCACTTctga
Protein Sequence: MYNVGKSYKCVECNTEFSHSLYLRKHMNIHTGEKPYSCVECDIVFSQYERLTYHMKTHTGEGPYICVECGKTFRLSSDLTSHVRIHSSEKPFSTVESNKTFRQASFLTRHKGIDTGLKPYKCVECFKEFSQSDPLRKHMRSHTGERPFKCVECDNTFSQSSNLATHMRTHTGEKPFKCTVCDKTFAQSSNVKLHMRIHTGEKPYKCDECDKAFAQRSGLVQHRRIHTGEKPYKCAECYKLFSNPSALKSHMRTHTGEKPYKCVECYKIFSNSSTLRSHMKTHTGEKPYICAECNKAFSQWSAFVRHSRIHTGEKPYKCVECYKIFSDSSSLTRHMRIHTGERPFKCVECDNTFSQSSDLITHMRIHTGEKPYKCNECDKTFAQSSNLKWHLRIHTGDKPYSCVECNKTFSRFSSLRMHMMSHTGGRPYKCLACGKTFSQFSLLTTHIRTHTGEKPYQCIECHKSFAECSNLRQHQRTHSGVKPYRCVECNKTFSQPSNLTSHMRTHTGEKPYKCVECDKTFRRSTHLTAHMRTHTGEKLYICVECDKAFSLASKLKEHMRIHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00678651;
90% Identity: iTF_00678651;
80% Identity: iTF_00678651;