Eocu026413.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eucriotettix oculatus
Gene Symbol
-
Assembly
GCA_034510155.1
Location
CM067379.1:6309905-6316387[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0015 0.15 13.8 0.2 2 23 187 208 186 208 0.97
2 17 0.0017 0.17 13.7 0.1 1 23 214 237 214 237 0.95
3 17 0.11 12 7.9 1.3 3 21 270 288 270 290 0.95
4 17 0.12 12 7.8 1.4 1 20 320 339 320 344 0.90
5 17 0.00017 0.018 16.8 2.9 2 23 350 371 350 371 0.98
6 17 0.00031 0.031 16.0 0.5 1 23 379 401 379 401 0.97
7 17 0.033 3.4 9.6 2.0 1 23 407 429 407 429 0.82
8 17 0.0012 0.13 14.1 2.2 1 23 435 458 435 458 0.97
9 17 0.25 25 6.8 1.2 2 23 465 486 464 486 0.74
10 17 0.00094 0.097 14.5 0.6 2 23 502 523 501 523 0.96
11 17 0.045 4.7 9.2 0.2 1 23 531 553 531 553 0.92
12 17 3.7e-05 0.0038 18.9 1.4 1 23 582 604 582 604 0.98
13 17 4.4e-06 0.00045 21.8 0.6 1 23 610 632 610 632 0.99
14 17 0.00014 0.014 17.1 0.1 1 23 638 660 638 660 0.99
15 17 0.0022 0.23 13.3 2.6 1 23 666 688 666 688 0.98
16 17 9.3e-07 9.6e-05 23.9 1.2 1 23 694 716 694 716 0.99
17 17 0.24 24 6.9 0.1 1 21 723 743 723 744 0.93

Sequence Information

Coding Sequence
ATGTGCGCCTTCTTGTTAACAACATTTCAGTCCTTCAATGTTCTTTTCCTCGTTGCTGTGAGCAAAACCTCCCCCCACCATACCCTTTGGCCAAATGCGAGGCGATCTTCCAGTTCAGCAGGACGACGTCCGATGTTCCTCGGCGTCGTGACATCACCAGGGGCGTCCTCAGTGGATGAGAAACCGTCATCAGAGGTTGGCCTCGCCTCGGACACCCGGCGGCTGGATCCTACAGCGACCATTCACCCTGTCCAGAGTCTAGTCCAGAGTTTTTCCAAGTTGTCAAACTTAATGCAGAACCTAGATAAGTTGTTGGTGGACAGAGCGGTGGATCAGACCTCTCATGATCCAACGGTTGCTCAGATTTTCGGAGAGGACAATGACGACATTGACCTCATTGTTGCTAGTGCTGCGAGGAACAATGTCCAGCAAGAAAGTAACAATTTCAAACCTAACGAAGATCTCTCGAGGAACGCAGATAAAAGCGAACTGCAGAAAATAGAAGCCGACTTGGAAAACTTGTTTCAGCTCCACAAAATTAGTATCAGTTTTCCGATGCCATGTGATTTTTGTGAGAGAACTTTTACCGATTTTGAAGAATTTGATGTGCACATTCTGACACACAGGGAAAGTCGCTTCTTCTCCTGCCAGCTATGTCCCAGCACGTACGTCTCTTGGGGCAACCTGGTCGCCCATCGCAAAGCGTCCCACCGCGGGAAGATGCTGAGTTGTACCTCGTGCCGCAAGCGCTGTTACCATCCGGGTCTCGGGCCTGTAAACTATCCTGTCAGCGGATTCCCCATCGGGTGTGAAGAGTGCCAAGCCGGTTTCACAACCATAGTGCAGCTGTACCGGCACTATCGCTGCCACAGTAAACAGAGGCCTAATGGAGCCAACTCGGAGGAATCGGATCTGCCCTCCAGCATGGGACTGTACGGACCGCCACCTCCCGACAGTCACAGGTGCCAGATTTGCAAGAAAGAATTCCTTAACGACGAGCAGCTTCGCACCCACACTGCTCAACTCCAACACAACGACGGCTCTAACACCTGCAGCATTTGCGGCCGCAAATTTTGCGACGCGCGGACTTTGGCGCTGCACAAGCGTCGCCACCCGGACGCTGTGGTCAAGTCCTTCATGTGTTCGCAGTGCGGTCGCGTGTTGAGAGATAGAGCTAGTTACCAAAGACATAAGATCATTCACAACAGCGAGAAACCGTTTCGCTGCACCTCGTGCCCCAAGTCCTTTAACCGTAAATCGATCCTCAGTTTCCACATGTACCTCCATCCTGCTAGGGAAGATTACAGGTGTTTCAACTGCAAAATGTCTTTCATTGACACCAAGGAGCTCAAAGACCATCTGAAGCAGACTCACCAACACGACTCCAGCCTGGTGTGTGACATATGCCAATCAGTCTTCAGCGTGAAGAGTTTACTTAAGCATTACATGAGCTGCCACGCGGCACGGAGAGCGAGGTCTGGCCCTCAGCGTCGAATCAATCTCACCTGCCCTATCTGTCAGAAGCTGTTCTCTCAGCCTTCAATTTTACACCGTCACCTGCTGCTTCATAATCCTACATTGAAAAGGGGACACAAGTGTGACATTTGTGGGAAAACTGTCTTAAGAAAAGCAAATATCCCAGCGCACATACGCGCACATTTTGGAAACGACGAGAATCGCATTCCCGTGCGTTACCGGCCGTTGCTGGAAACTAAGCAGAACGCCAAACCTCCTCAGAAGTGCTTTACTTGCGAATATTGCGGCAGAGAATTCAGGAAAGCCATACACATGAAGGTCCACGTCAGGTGGCACACGGGCGAGAAACCGTACCGCTGCGAATTGTGTGACAAGGCGTTTTACACCAACCAGCAGTTGGTGATCCACGTGAGGAGGCACACTGGCGAAAGGCCATATCAGTGCACGGCTTGCAACAAGAGCTTCGCCGGCCCCACCGCCCTCTACGCACATCGCAAAGTGCACAGCAAGGTTAAACGATACAATTGTCCTCACTGCAACAAAGAATTCTTCTGGCGCTCAGAGTTCATCAGCCACGTCCGCCGCCACACGACAGACAGGCCCTACGTCTGCTCTATCTGCGACAAGTCCTTCACCCTGAAAGGGAAACTGAACCTGCACATGAAGAAACACGAAACTGACCATCAGCTATTCCGTTGTTCGGACTGCGGCGACAGCTTCTTGATGGAGCAAGAGCTGGCGAGGCACATAAAGAATCAGGGCTGCGACGCCTCTGCCGTGTGA
Protein Sequence
MCAFLLTTFQSFNVLFLVAVSKTSPHHTLWPNARRSSSSAGRRPMFLGVVTSPGASSVDEKPSSEVGLASDTRRLDPTATIHPVQSLVQSFSKLSNLMQNLDKLLVDRAVDQTSHDPTVAQIFGEDNDDIDLIVASAARNNVQQESNNFKPNEDLSRNADKSELQKIEADLENLFQLHKISISFPMPCDFCERTFTDFEEFDVHILTHRESRFFSCQLCPSTYVSWGNLVAHRKASHRGKMLSCTSCRKRCYHPGLGPVNYPVSGFPIGCEECQAGFTTIVQLYRHYRCHSKQRPNGANSEESDLPSSMGLYGPPPPDSHRCQICKKEFLNDEQLRTHTAQLQHNDGSNTCSICGRKFCDARTLALHKRRHPDAVVKSFMCSQCGRVLRDRASYQRHKIIHNSEKPFRCTSCPKSFNRKSILSFHMYLHPAREDYRCFNCKMSFIDTKELKDHLKQTHQHDSSLVCDICQSVFSVKSLLKHYMSCHAARRARSGPQRRINLTCPICQKLFSQPSILHRHLLLHNPTLKRGHKCDICGKTVLRKANIPAHIRAHFGNDENRIPVRYRPLLETKQNAKPPQKCFTCEYCGREFRKAIHMKVHVRWHTGEKPYRCELCDKAFYTNQQLVIHVRRHTGERPYQCTACNKSFAGPTALYAHRKVHSKVKRYNCPHCNKEFFWRSEFISHVRRHTTDRPYVCSICDKSFTLKGKLNLHMKKHETDHQLFRCSDCGDSFLMEQELARHIKNQGCDASAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01565776;
90% Identity
iTF_01565776;
80% Identity
-