Basic Information

Insect
Euclidia mi
Gene Symbol
-
Assembly
GCA_944738845.2
Location
CALYKX020000052.1:1595899-1598510[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 1.5e-05 0.0043 19.6 0.1 1 23 301 323 301 323 0.97
2 11 0.00018 0.049 16.3 1.9 1 23 395 418 395 418 0.97
3 11 0.0034 0.95 12.2 2.9 1 23 422 444 422 444 0.98
4 11 0.0015 0.43 13.3 1.8 2 23 466 488 465 488 0.92
5 11 0.014 3.8 10.3 2.1 1 23 492 515 492 515 0.98
6 11 0.016 4.4 10.1 0.3 2 23 538 560 537 560 0.93
7 11 1.3e-05 0.0036 19.8 1.9 1 23 572 594 572 595 0.96
8 11 0.014 3.8 10.3 2.0 2 23 611 632 610 632 0.96
9 11 0.0072 2 11.2 0.3 1 23 638 660 638 660 0.96
10 11 0.92 2.6e+02 4.6 3.4 1 21 666 686 666 690 0.90
11 11 0.15 40 7.1 0.0 3 23 747 767 745 767 0.97

Sequence Information

Coding Sequence
ATGGCACACATAAATCTACACACAGAAACTATGGACATTCCAGCTGAAACAATTAAACAAGAAGACGAACTAGAACAAAACCTCTCAGAAGATGAAACGCAGCACGAAATCAAAATAGAAACGCACACAGATGAAATACCACCGGAAGATCACAATCCTTTCGTTAACGTTCAACTTGAAGTTAAACAAGAAGTATCATTGACTGTAGAAAGAGAAGTGATAGGTCCTCAGGATAATAACGAAATAATTACTGCGGAATATAACCCAGTTGATGAAGATTACTTGCCTTTAGCAAAAACTGAGGCAGATTGTCATGAGAAATCTGAGGTGAAAGCTGAAACGGTCATAGGTGATGAATCGCTAGTGACGTATGATTATCCACAGTTTGACGATGAAGATGATGATGATGGGTTACTTGACGATAGCATAGATAGCAATGATGCGGCCGCGTTGACGAGGGTCGAGGCGTGTTTGCAGGATGATGTTAATATTAAGAGTGAAACTGATGGACATTTTGAGCATAACCAAAAAGAAGATTTCGGCAAAATTGACATAAAGGAAGAGGCCGACTTAACAGTGACAGAGACGCATTTGATATCGAACAAACTGATCAACACAACGTCAACAGTCACCAATACCCACGATGGACTCATTGAGTCACAAACCACTAAGACTTTAGTCATGGAAATACTGCCAATGACACGCACAACTACTATACCTTTCTCTAAAATGTCTAACCCGGAAGAAATTCTACCAACGACGTACGAAAACAATGACGATTACACAGATTACCAAGACGCTTTCCAACTAAATTCGATCACAGGCAATGTTTTATCGCTGGAACAAGAAGCCTATGGTCTTCTAAAAGCAAAAAGAAAAAAGAAAGACCCAGGAAAAATGTACATTTGTCCAAAATGTCCCAAAACTTACGCGCAGAAAAGAGGATTGACATTACATTTAGAAGTTCATGCGACTATCGAGAAACGTGCGCTCGGGTTTATCAAAGGACAGAAAACTAGGAAACAAAATAGAAATATGAAACTTAAAGAGGAAGCTTTGAAAGAAGAAGATAAGGTTAAGAAAGAAGGTTACGAATGTACTTGTGGGCAAGTGTTTCAAAGAAGAAGTCGGATGGAAACTTGCTTGAGGTCACATAATATGTATAATATGGATACAAATTCGTATCCTTGCGTGACTTGTTCAAAACATTTTAAAGATAAAGAAGAATTAGCTTTACATCGTAAACGGCTACATAGAAAAAGATTTCCTTGTAAATTCTGTCCAACAGACTACCACACGCGTAAAGAATTGTTCAAGCATCTACAGGTCCATCAAAAAGTTCAACTTATGGAGTATAAAGTTATATCGGAAGTTGTTAAAGGAAATCAGAAGTTAAAATGTTTTATGTGCTCAAAAACGTTTACGGAATTGCATGAATTGAAATCTCACGTGATGGACGATCATAAAGAGCCTTATACTTGCCCGAGATGTAAACAACGGTTCTCAAAGATCATCGATTTCGGTAATCATACGAAGACTTTTCATCCAGAGGTTGAAGGGGAATCTGTTTTGAATGTCCTAGAAGCTTTCTCTAAGCTAGTGAAAGCGTGGAAATGTGAAGAATGTGGTTTACAATTTCACGAAGCTGACAAACTAGCTATGCACCAGATAGAGAAGCACAGTCCGACTCCGGATGTTAAGGCTGAGCCACAGTTCCAATGTGCCGATTGCAGACGAGTATTCGTCAGTCAGAAGGGGCTCACTTCTCATAGAAGAGTGCATCACAGTACAGAAATCGTTGAAGAAGCGGAGACAGTCGAAAAAGGTGTGATGTGTCTCGAGTGTAGGAAAATGTGTAAAGATATGAATGCTTTGCTATCTCACATGCGGTTCCATTCTCCCGACAGAAAGTACCCTTGTAAGTTCTGCGACTTTAGGTTCGCTACGCCAGAGAAGAGAAAAGTTCACGCAGAAATTCACACAGGTGACATGAAATACGTGTGTTTTATTTGTGAATACCAGTGCAGCTCAGAAAACCGTTTAAAGCAACACAAAACGTCGTTAAAACATTTGAATATGAAAGAGTTTCTTTTGACAGGCAAGCCTTTGGTAGAAGAGGAGCAATCGACGTCTAAGCAAGAGAAAATAAAAGATACTTTGAAGAAGAAAGAGTGGGTTGTCAAAAAGAAGAGAAAAAAGGAGTCAAGTGATTCAGGTTCTGAGTGTAGTGAGGTGGCCTGTGATATTTGCGGGGACAAGTTTCCTAACGAAAGTGTAATGTTGGAACATAAACAGACGCACCCTTTCATAGAGTTTCCGAACGAAGACAAACCAAGTAGGATATTCTTTAAGTAA
Protein Sequence
MAHINLHTETMDIPAETIKQEDELEQNLSEDETQHEIKIETHTDEIPPEDHNPFVNVQLEVKQEVSLTVEREVIGPQDNNEIITAEYNPVDEDYLPLAKTEADCHEKSEVKAETVIGDESLVTYDYPQFDDEDDDDGLLDDSIDSNDAAALTRVEACLQDDVNIKSETDGHFEHNQKEDFGKIDIKEEADLTVTETHLISNKLINTTSTVTNTHDGLIESQTTKTLVMEILPMTRTTTIPFSKMSNPEEILPTTYENNDDYTDYQDAFQLNSITGNVLSLEQEAYGLLKAKRKKKDPGKMYICPKCPKTYAQKRGLTLHLEVHATIEKRALGFIKGQKTRKQNRNMKLKEEALKEEDKVKKEGYECTCGQVFQRRSRMETCLRSHNMYNMDTNSYPCVTCSKHFKDKEELALHRKRLHRKRFPCKFCPTDYHTRKELFKHLQVHQKVQLMEYKVISEVVKGNQKLKCFMCSKTFTELHELKSHVMDDHKEPYTCPRCKQRFSKIIDFGNHTKTFHPEVEGESVLNVLEAFSKLVKAWKCEECGLQFHEADKLAMHQIEKHSPTPDVKAEPQFQCADCRRVFVSQKGLTSHRRVHHSTEIVEEAETVEKGVMCLECRKMCKDMNALLSHMRFHSPDRKYPCKFCDFRFATPEKRKVHAEIHTGDMKYVCFICEYQCSSENRLKQHKTSLKHLNMKEFLLTGKPLVEEEQSTSKQEKIKDTLKKKEWVVKKKRKKESSDSGSECSEVACDICGDKFPNESVMLEHKQTHPFIEFPNEDKPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01502422;
90% Identity
-
80% Identity
-