Basic Information

Insect: Euclidia mi
Gene Symbol: -
Assembly: GCA_944738845.2
Location: CALYKX020002003.1:11821-12885[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0047 1.3 11.8 0.3 3 23 79 100 77 100 0.91

2 9 0.019 5.3 9.9 2.7 2 23 123 145 122 145 0.93

3 9 0.0008 0.22 14.2 0.0 1 23 151 174 151 174 0.94

4 9 4.1e-06 0.0011 21.4 0.3 2 23 180 202 180 202 0.96

5 9 0.00015 0.042 16.5 0.2 2 23 208 230 207 230 0.93

6 9 4.4e-05 0.012 18.1 0.9 1 23 237 260 237 260 0.97

7 9 0.00013 0.037 16.6 0.3 2 23 267 288 266 288 0.93

8 9 5.8e-06 0.0016 20.9 3.2 1 23 294 316 294 316 0.99

9 9 2.6e-06 0.00072 22.0 1.0 1 23 322 344 322 345 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0047	1.3	11.8	0.3	3	23	79	100	77	100	0.91
2	9	0.019	5.3	9.9	2.7	2	23	123	145	122	145	0.93
3	9	0.0008	0.22	14.2	0.0	1	23	151	174	151	174	0.94
4	9	4.1e-06	0.0011	21.4	0.3	2	23	180	202	180	202	0.96
5	9	0.00015	0.042	16.5	0.2	2	23	208	230	207	230	0.93
6	9	4.4e-05	0.012	18.1	0.9	1	23	237	260	237	260	0.97
7	9	0.00013	0.037	16.6	0.3	2	23	267	288	266	288	0.93
8	9	5.8e-06	0.0016	20.9	3.2	1	23	294	316	294	316	0.99
9	9	2.6e-06	0.00072	22.0	1.0	1	23	322	344	322	345	0.95

Sequence Information

Coding Sequence: ATGCGCAAAGAGGACCTAACGAGGCTTATCACTATCGTGCTGGAGAATTCAAGTATTATGCCGTTCCGCTGGGCTGCTAACAAATATATGTGCTTCTTTTGTTGCTGCACCTTTGTTGATAGTGTCAAACTAAAAGAACACACACATGAGGAGCACAAGGACGCAAAACTTCGACGTGTGTTGAGGACCTTGCTCGGTAACAGTCGCGTCAAATTGGACACTTCAGATATAGCCTGCAGAAGATGCCCAAAACGATTCGATAATTTCGAAAATTTTCTAAGTCATATTGCCGATACACATGAGTTGAGATTCAACAAAGACATTTCGCGATGTCTCTTTACTTTCAATCTATCAGACGACGGCATGTCTTGTCACGAGTGTGGACAGGAGTTTCGATTCTTTGGGCCGTTATTGAAGCACGCGCATAAATACCACAATAAGTATAAGACGTTTCTCTGTGAAATATGTGGCCAGGGTTTCGTGGCAAAGGCGAACGTGGAAAGCCACATCAAAAATGTACACAGCTTGAATGACAGACAGTGTTTAAAATGTGATAAAGTATTTAGGAATCCTTACGCGTTGCAGGTGCATCGTGAAAGAGCTCACAAGATTGAATCGTTGAAATGTCCAAAATGTCCAGAGGTGTTTCCATCGAAATATTTGAAGAAGCGCCATTTAGCTTTAGTACACGATGTGAAAAAGTTGCAATTTAGCTGTGATGAGTGCGAGCGTGTGTTTACGATGAAAAGTCGATTAGTTCAGCATCAGCTGAGGACTCATTTAAAGCAAAAGACTGTTTCGTGTGAGATATGTGGGTTTAAAGTTTTTAATAATGATCTTCTGAGGCGGCACATGGTTCGGCATGACGATTCGAGGCCTTTTCAGTGTGAGTTTTGTAAGAAAAGTTTCCAGAGGAAGAAGACGTTGGAGATTCATACCAGGATACACACGAACGACAGGCGGTACGCGTGCAAAGAGTGCGGGCGCGCGTTCGTGCAGGTGACGAGCTACAAGCTGCACATGAGAGTGCACCACGGGGGGAACGAGGGCTCCTCTTGGAACTGA
Protein Sequence: MRKEDLTRLITIVLENSSIMPFRWAANKYMCFFCCCTFVDSVKLKEHTHEEHKDAKLRRVLRTLLGNSRVKLDTSDIACRRCPKRFDNFENFLSHIADTHELRFNKDISRCLFTFNLSDDGMSCHECGQEFRFFGPLLKHAHKYHNKYKTFLCEICGQGFVAKANVESHIKNVHSLNDRQCLKCDKVFRNPYALQVHRERAHKIESLKCPKCPEVFPSKYLKKRHLALVHDVKKLQFSCDECERVFTMKSRLVQHQLRTHLKQKTVSCEICGFKVFNNDLLRRHMVRHDDSRPFQCEFCKKSFQRKKTLEIHTRIHTNDRRYACKECGRAFVQVTSYKLHMRVHHGGNEGSSWN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707256;
90% Identity: iTF_00707256;
80% Identity: -