Emi029409.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euclidia mi
Gene Symbol
-
Assembly
GCA_944738845.2
Location
CALYKX020000262.1:2776657-2784836[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.015 4.1 10.2 3.3 1 23 204 227 204 227 0.96
2 30 0.0011 0.31 13.8 1.0 2 20 259 277 258 279 0.93
3 30 2.4e-05 0.0066 19.0 0.2 2 23 315 337 314 337 0.96
4 30 1.4 3.8e+02 4.0 0.6 2 18 354 370 353 373 0.81
5 30 0.0025 0.71 12.6 1.2 1 23 384 407 384 407 0.97
6 30 0.01 2.9 10.7 0.8 1 23 425 447 425 447 0.95
7 30 0.0016 0.44 13.3 2.5 2 23 487 509 486 509 0.96
8 30 0.0016 0.44 13.3 4.1 2 23 548 570 548 570 0.97
9 30 0.0041 1.2 11.9 0.4 1 23 620 643 620 643 0.96
10 30 0.0033 0.91 12.3 0.2 1 23 696 718 696 718 0.97
11 30 0.0057 1.6 11.5 7.2 1 23 729 751 729 751 0.98
12 30 0.016 4.3 10.1 1.1 2 23 763 784 762 784 0.96
13 30 0.0027 0.75 12.5 1.4 1 23 794 816 794 816 0.98
14 30 0.0034 0.94 12.2 9.6 1 23 845 867 845 867 0.96
15 30 0.00096 0.27 13.9 4.0 1 23 878 900 878 900 0.98
16 30 5.6e-06 0.0016 21.0 0.3 1 23 908 930 908 930 0.97
17 30 0.00025 0.071 15.8 0.5 2 23 950 972 949 972 0.97
18 30 0.63 1.8e+02 5.1 0.1 1 23 990 1012 990 1012 0.91
19 30 0.11 31 7.5 3.7 1 23 1019 1041 1019 1041 0.97
20 30 0.028 7.9 9.3 2.0 2 23 1052 1074 1051 1074 0.94
21 30 0.015 4.1 10.2 0.2 2 23 1097 1118 1096 1118 0.95
22 30 3.7 1e+03 2.7 5.6 2 23 1161 1183 1160 1183 0.95
23 30 0.0031 0.88 12.3 0.2 3 23 1200 1220 1198 1220 0.94
24 30 1.2 3.4e+02 4.2 4.7 3 23 1228 1248 1226 1248 0.96
25 30 0.013 3.6 10.4 0.8 2 23 1259 1281 1258 1281 0.95
26 30 0.48 1.3e+02 5.4 4.6 2 23 1298 1316 1298 1316 0.90
27 30 0.52 1.4e+02 5.3 1.3 2 21 1320 1339 1320 1340 0.92
28 30 0.43 1.2e+02 5.6 0.9 2 23 1388 1409 1387 1409 0.93
29 30 0.0006 0.17 14.6 0.7 2 23 1420 1442 1419 1442 0.96
30 30 1.4 3.8e+02 4.0 3.1 2 20 1480 1498 1480 1500 0.92

Sequence Information

Coding Sequence
ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGGGACTTCTATTCCATCTTCACAGTGGACAATTCTTTGCAGCTGGCGGAGATGGTTATGGAATGTACCCGGGTAAAAATTTATGATGGTGATGGGCTGCCAGATAAAGTTTGCTCTGAGTGCATACAAAAACTCAGTAGCGCTTATATATTTAAACAGCAGTGTGAGCGTGCTGATGAAGAGTTGCGAAGAAACTATGTACCCCCACCAGGTTTTAGTATCAGCCCACCGCCGCCCACCAGACAGAGTAGCGACTCGGCGTTCTCTAACCATACCGACAGCTCAAACCTCACTAAACCTCCGTCATCCGTTGAAATTAAGAAATCCCCAATAACGAGGACTCGGAAACGCAGCTTGGAGAGCGAAGGCAATACTTCGGTAGGAGGCAGGTCAAGCGATTATAAACCTACAGGCTCAAAACGTGTGGAAGAACTCAGAAATTCTCAAAAGAGACCGCGTTTCCAATCCAGCAACAACTCGCAAAATGAATCTGATTACGAAGACAACAACAGCGGATCCAACTACATACCTGAAACTGATTCTGACGAACCACTTATGAAGCAAGAGTTTAAATGCAAGTCATGTCCCAAGGAGTTCCATAGCTACAAAAGCCTCGCTATTCACACTAGCAGAATGCACGGCAAGAAAGTTGAGGACACCCCTTTCAATGATACCATGGTCGATATACCGAAGAAAAATAACGAGGATGCTGTCGACGTCGAGGACAAGCTGTCTTGTGACAAATGTGATAAAACGTTCAAACTGAAGATAATGCTGAAGCGCCATCACGATGTTTGCACCGGCAAAACACCACTCAAATCTCCGCAGAAGGAACTGCTTATTTCCTTAGAACCGATCGACGCCAAGCAGAATCTGTCGCCGCAGACTTCAAATACCATTTCCTGTGAATACTGTACTGCCAAATTTAAAACTGTTGATAACCTAGCTAAGCATATGAGAGTGGTTCACGCGGCGGTTTTGAAGCGTGAAGCTGAGCCGAACAAGAAGGTGCCGGTACCTTGCCTGTATTGTAACAAGATGTTTGATGATTACTATCAACATAATTCGCATTTTAGCCAGTGTCCGAAAATGGATGATTCTAAACCGTTTGAGTGTCCTGTTTGTAAGAAGGTTATGTCTAGGAAGACGTCGTACTACCAGCACATAAAGAACATGCACCTGGAGCCGCGGATCATGCACGCGGAGAACGACGTGGAGAGTCAGGAGTACCACGAGTGCCGCATGTGTCTGAAGAAGCTGTCGTCACAGGAACAGCTCATCAAGCACCTGGCGGCGCACGTGTCCAACATCGAGGACGATGGCGCCGCTGACAACGACTCCAGAGCAAGTACTGCTGACGATGTTGCATCTGTGCAATCGGCACAAAGCAATTCCTACCCTGCAAGCGGTCCGATGAAGTGTGAAGTATGCGATAAAGAGTTCAAGTATAAGAAAGCTTTTCTAACACATAAACAAAAGTTCCACACAGACGTGCCTATAGAAGTGAAAACAGAACCGCCCGATAAAGCGTCTACCAGCCTTCTAAGCGAGAAGCAGTATCGTTCCGAAACAGATTCTAGTCATGAAGAGGACGACAATACTTGCGACATTTGCGAGAAACAGTTCTCGTATAGACGTCTGTTGCTGCACCACAAGAGAACGAAACATAACGTGAGCTCGGGGACCAAGCGCGCCAAGATCTACCTCAAGGACTGCTCGGTGCGCTGCCTCATTTGCGACCTGGAGATGAAGGTGTGCGATATCAACCAGCACAACCAGACGCACATCGCCAAGAACATGAAGCCGCGGAACCTGTACACGTGCGCCGAGTGCGAGGCCACGTTCAAGGCGTGCAGCGCGCTCGCCAACCACATCAAGTTTGTGCATAGATTAAAGCAGAAGGTCACGGAGAATACCGTAGATCCTTCGGATTTTTGTGAAGTCGTTGTGACAAAGTCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTGGAGAGGTTCCGGTCGAGGAGGGCAAGCCGCTGGTAGATCTGAGCGGCTTCACATGTCCCATCTGTGAGAAAAAGATGCCCACTCTGATTTCACTTAAGAGACATGTCAACTGGCACACTAATGTTGGCAAGAATTTGGAAAAGAAGTACGAGTGCTTCGTGTGTAAAGAGTCCTTCCGATTCCAATGCCACTACAAGCTTCACATGCGCGAGCACTACACGGACACGAACCTGGACCCCGCGCACCTGACGTGCCCGATCTGCGGGCGCAAGAGCAAGCACCTCCGCGCCGCGCAGATGCACATGAACTTCCACAAGCAGACGCGCTTCAAGACCAAGGACTACCAGTGCTCCATCTGCGAGAGAGTCTTCCAGCACCGCAAGGTATACCTGTCCCACATGGCCATACACTACAAGCGAGGCGACAGCGCACAGAACACTATCGTAGGCGATTACGTACCCAACAACATCGACAAAAATGTCTTCGACGGCTCCCACACCTGCCATCACTGCGGCAAAGTGTGCGACTCCGAGTCTTCCTTGAAACACCATCTGAGTTGGCACACTTCCAAAACCTTCCTGTACGGTGCCCGACATGAATGCACCATATGCAAGGTCAAATTCACCAACAAGAGACGGCTGGAGCTCCATACTAGAACACACTACGAGGATGAGAATGGACCCTTCAAATGTCCCATTTGCGGCAAAGGCTACACCGACGAGGGCTACTTCAAGAGACACGTCAAAGGCCACAATTTTGATCATCAATCCCACAAAAAGAGGATAGAGAATATAAGGAAGGACAAAGTGAAGTGTCCCATATGCTCGCGGTACTACAAGGACCTGGTGAAGCTGATCCGTCACCTGCGGCGCACGCACCCCGAGAGCAAGATGATCAAGGCGGACCCCGACGCGCCGCCGCAGCTGTACTACTCGTGCAAGCTCTGCGCCAAGGTGTTCCTGGACGAGCGGCGCCTTCAGGCCCACGAGGAGGCACACTTGAGGAAGCCGGAGTTCTTCAAATGCAAGTTCTGTGGCAAGAAGACTATATCTCTGAAGAACCACAGAATTCACATTAAAGGTCACCTCACGCAGAAGTACCTGGACAACCCGCTGAAGTGCCAGCACTGCGAGGAGACGTTCGGGCGCGGCTACGACCTGCACTACCACGTGCGGGACGTGCACGGCATCGAGGAGACGTGGATCGCCGAGCGCACGGAGCAGCGGCTGGCCGGCCCGCTCAAGGACCTGCAGTGCTCCATCTGTATGAAGGTGCTCGCCAGCAAGGGGAACTTCGAGCGACATCTCGACTACCATAACTCTTTGAGATGCAATTACTGCTTTGACTACTTCAGCTCTCTTAGATTCTTGGAGGGACACTTGACGTTCTCCTGTGAAAAGAAGAAGCTCCTAGGTGACACGGAGATTTATCCGAAGAAAATAAAATGCCATATTTGTTACAAACCTTTCCACGTGCAAGTGAAGTTGGACTGCCACCTGCGCACGCAGCACGACATCAAAGTGTCCAGAGAAGCTTCATCTGGGAAGAAGGAGATCATCTGTGATTACTGCTTTAAAGTGTTCGAAAACGAGTATGCTCTCTCTACTCACAAAATATATCATCGCACCGTGGGTTACTTCGGCTGTCTTTACTGCAAGAGAAAGTTTGGCACCATGACTCTTTACCGAAAACACAAAAACCACCATTTCGCCCAGTTGAACGTAGATGAACCGACGAAGTGCGAACATTGCGACGAGACGTTTGTGGCGTTCAGAGAAATGATATACCACATGAGGGACGTCCACAATGATGATAAAGACTGGGTCACCTTACCGAAGGATTCGATAGAGGAGACCTGCCCGATCTGTCACAAAACATTCTTTAATTTGCACCGGCATTTGGCCTACCACGAAGAGAATAGGTGTAAAAAGTGCGGCGAATATTTCTTCTCGACGGCAGATTTCGATAACCATTTGTGCGCCATAGAGAGTGATGACGAAGGTAACACCAGTGTCACTATAGAGCGGCCCAAATACGAGGAGTGTACCTTCTGTTTCAAACCAATCACGAGAAAGAGTTCTAAAGCCAAGCATGATCATATACACAAGGGTTCTGGCTCTATATCATGTAGATTCTGTTCTCTCAAATTCAAGACGATGGATGCGTTCAATATCCACGCCTTCTCCCACCGCAATAGAAAGTATAACAAAAAGCCGATTAAATGTAGAAAATGTGGCGAGAAATTTGTGAAGTACGGACTTTTCATAAAGCACATGAAGTTAGTGCACAAATCTCTGAAGAAGATGCACTACCGCGCGGTAGTCAAGCCGGAGGTTTGCGTGGTGTGCGGCGACGAGTTCCCTAACCTGCACAACCACTACCGCGCTCACTTACTGAACCAGTGCCAGGCCTGCCACAAGTACTTCACCTCCAGCAAGCTGTACACATTGCACGAATGCGATAAGGAGGATTCGGATCCATCGAAGGTGTTTACGAGCGACGCGAAATTAACTGAACTGATTAACACTTACGTTCCTAAAGATATGAAGGACGACGAAAAGTACTACGGGCATACCGACGACGAAGATGAGGAAGACGAAGAAGATACTCTGTCACAAGTGTGCGGAGAGGACGACGACAGCCAGGACTGTAAAGAGTTTAAACCATTGGATTTCAAAGAGATTGATATTCACAATGATGACATAACTAAGCATCCTATATCTATCCAGTCACCGATCATTTCCGACGTGTTGTCGCTTTACCAGAAAGAGATGTCTCCGGCTGTCGTAGATGATAACATTGTGAACCTAACTGATGACGATTCTTTAGACGTTGATCACGTGGCGCAGAACCACTGTGACACCATTGTGATCATCGACGATGATGATTAG
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMVMECTRVKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADEELRRNYVPPPGFSISPPPPTRQSSDSAFSNHTDSSNLTKPPSSVEIKKSPITRTRKRSLESEGNTSVGGRSSDYKPTGSKRVEELRNSQKRPRFQSSNNSQNESDYEDNNSGSNYIPETDSDEPLMKQEFKCKSCPKEFHSYKSLAIHTSRMHGKKVEDTPFNDTMVDIPKKNNEDAVDVEDKLSCDKCDKTFKLKIMLKRHHDVCTGKTPLKSPQKELLISLEPIDAKQNLSPQTSNTISCEYCTAKFKTVDNLAKHMRVVHAAVLKREAEPNKKVPVPCLYCNKMFDDYYQHNSHFSQCPKMDDSKPFECPVCKKVMSRKTSYYQHIKNMHLEPRIMHAENDVESQEYHECRMCLKKLSSQEQLIKHLAAHVSNIEDDGAADNDSRASTADDVASVQSAQSNSYPASGPMKCEVCDKEFKYKKAFLTHKQKFHTDVPIEVKTEPPDKASTSLLSEKQYRSETDSSHEEDDNTCDICEKQFSYRRLLLHHKRTKHNVSSGTKRAKIYLKDCSVRCLICDLEMKVCDINQHNQTHIAKNMKPRNLYTCAECEATFKACSALANHIKFVHRLKQKVTENTVDPSDFCEVVVTKSEPLDWIQSHNDFGEVPVEEGKPLVDLSGFTCPICEKKMPTLISLKRHVNWHTNVGKNLEKKYECFVCKESFRFQCHYKLHMREHYTDTNLDPAHLTCPICGRKSKHLRAAQMHMNFHKQTRFKTKDYQCSICERVFQHRKVYLSHMAIHYKRGDSAQNTIVGDYVPNNIDKNVFDGSHTCHHCGKVCDSESSLKHHLSWHTSKTFLYGARHECTICKVKFTNKRRLELHTRTHYEDENGPFKCPICGKGYTDEGYFKRHVKGHNFDHQSHKKRIENIRKDKVKCPICSRYYKDLVKLIRHLRRTHPESKMIKADPDAPPQLYYSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRIHIKGHLTQKYLDNPLKCQHCEETFGRGYDLHYHVRDVHGIEETWIAERTEQRLAGPLKDLQCSICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLTFSCEKKKLLGDTEIYPKKIKCHICYKPFHVQVKLDCHLRTQHDIKVSREASSGKKEIICDYCFKVFENEYALSTHKIYHRTVGYFGCLYCKRKFGTMTLYRKHKNHHFAQLNVDEPTKCEHCDETFVAFREMIYHMRDVHNDDKDWVTLPKDSIEETCPICHKTFFNLHRHLAYHEENRCKKCGEYFFSTADFDNHLCAIESDDEGNTSVTIERPKYEECTFCFKPITRKSSKAKHDHIHKGSGSISCRFCSLKFKTMDAFNIHAFSHRNRKYNKKPIKCRKCGEKFVKYGLFIKHMKLVHKSLKKMHYRAVVKPEVCVVCGDEFPNLHNHYRAHLLNQCQACHKYFTSSKLYTLHECDKEDSDPSKVFTSDAKLTELINTYVPKDMKDDEKYYGHTDDEDEEDEEDTLSQVCGEDDDSQDCKEFKPLDFKEIDIHNDDITKHPISIQSPIISDVLSLYQKEMSPAVVDDNIVNLTDDDSLDVDHVAQNHCDTIVIIDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01502316;
90% Identity
-
80% Identity
-