Emi033317.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- -
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000317.1:1087557-1089905[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0012 2.7 10.3 1.2 18 43 9 31 5 32 0.95 2 19 2.4 5.2e+03 -0.2 0.2 18 43 37 59 33 60 0.72 3 19 0.00056 1.2 11.4 0.0 18 43 68 90 65 91 0.94 4 19 0.00014 0.3 13.3 0.3 17 44 98 122 96 122 0.94 5 19 0.0018 4 9.7 1.5 18 44 129 152 127 152 0.94 6 19 6.8e-06 0.015 17.5 1.0 14 43 156 182 153 183 0.89 7 19 0.00018 0.4 12.9 0.3 17 44 188 212 184 212 0.89 8 19 0.0028 5.9 9.2 0.3 19 43 221 242 214 243 0.91 9 19 0.00016 0.33 13.2 1.4 4 44 240 280 239 280 0.93 10 19 6.9 1.5e+04 -1.7 0.3 18 29 336 347 332 353 0.77 11 19 2.7 5.8e+03 -0.4 0.0 17 26 364 373 360 379 0.81 12 19 2.5 5.5e+03 -0.3 5.3 18 43 410 432 401 433 0.88 13 19 2.1 4.4e+03 -0.0 10.6 12 29 433 450 424 462 0.69 14 19 0.0022 4.7 9.5 3.3 6 43 456 490 453 491 0.83 15 19 0.11 2.3e+02 4.1 0.8 17 44 496 520 492 520 0.85 16 19 0.79 1.7e+03 1.3 0.8 18 28 527 537 523 550 0.82 17 19 4.3 9.2e+03 -1.0 0.9 19 43 558 579 553 580 0.74 18 19 0.00027 0.57 12.4 2.9 6 44 609 646 607 646 0.76 19 19 0.47 1e+03 2.0 0.5 13 28 691 706 678 708 0.77
Sequence Information
- Coding Sequence
- ATGTATCACAACCAACTAGACTTTGTATGCGATTACTGCTCAAGAACTTTCACAAGGAAATACAACCTGCGGACGCATATAGAAAACTGCCACATCAATTCTTCCAGTCACTGTGACATCTGTGGTCAGAATTTCGGCAGTCCTGCTGGCTTGCAACTTCATCTATCCAGAGGCCATAATCATTATGGACAGCCATTCCCTGAGTGTGAATTGTGCGGAAGAATCTTTACTAGAAAACAGAATATCATGTCACATATGATAACAGTCCATCTGCAAGGATTAGGAGATGATATCAGATGTAGATTATGTGATAAACCATTCACAACTGAACGAAATTTGAAGAGGCATATGAATCAACAACACAACCCCGATATGGAATATCCTACATGCCATTACTGCACTAAAGTTTTTAGAGGTAAACACTCACTCATCGCTCATATTCAATCGGTACACAGTTCTCAAGAAAAAGATGTCATAAAATGTCACTTATGCGAAAAAGTTTACACCAATACCAGAAATTTGAAGCGGCACGTCGAAATGTTTCATGGTGAAAAAGGGGAATTTCGCTGTGATATTTGCCCTAAAGTGTATACGTCTAACCAGAGTCTAAGAAGGCATTTACGTACAACCCACAGTACTGATAGTCACGAACAATTTGGTTGCAGCTATTGTGGTAAAGTTATCATTGGGAAAGAGAATTTTGAAAGTCATATGCAATATAACCACTACCAACAAGTAGAGGTGGAAGTTAAAATTGAGAATGATATAATTTGTGAAATTTGCCACCAGTCTTACGAAGAAGAGACCCAATTAAGACAGCATATAAAGATGCAACACTCCTTTAAAGCGTTTTATAAATACTGTAAGAAGGTTCTTGTCAAGCAGTATGGCATGGAGTATGTTAATAATATTTACAATTGCGAGTTTTGTCAGCATTCTTTCCCTACTGTTTACGAATTAAAAGATCACATGAGAGTAAACCATGACACGGAATATTCGTTATCAACTTGCAATGTCTGCTTCAATAAGTTTTATAGTAAAGAGACTATGAAGGCTCATAAGAAAGTGTGTCTTCCACCAGCCGACGTCAATTCCTGCAGTCATTGTGATAAACTTTTCACTGATATATCAAGTTTAGAATTCCATTCAAGAATTTTCCATCCACAAGCTCAAATCGCAGACTCCAATATCAGTTCAACGAACATCGAAGAAGAAGTGAGCTGTTTCAAATGTGAGCACTGTGATCGTATGTACTACAGTGACAGGTCTTTGAAGCATCACATCAAATTGAAACATACGTCAGATGAGCAAGTAGAATGTACTTATTGCGGCAAAATATGCAGTAATAAGTACTATCTGGCCTCTCATATCAAAATTGTCCACAACAATGACACGTGGTCCCGTTGCGAATATTGCGATAAACAATTCAAATCTAAGAGAAATATTCGGAGGCATATCGAATACACGCATTTAGGGATGCAGAGATACAAATGTATCGAATGCGAGACGTTGTTTAAAGAAAAACGGAGTTTGAGGAAGCATGTTAGGACAAAACACCCAAATTCGGCTGCTTTCCCACAATGTCATATTTGCCACAAGCGGTTTGAATCTGCGAAGTCCTGCAAAATCCATCTGAAACTACTTCATTCTTTTAACATGAATACGTATCCTTGCCACCTCTGTTCAGTGTCATTTAGTTCTAATGAAGCTCTGACTATACACTTGAATACAAAACATTTGGCAGAAGACGAAATATACAAGTGCGAGCAATGCAATCTTGTTTTCAAGGGCCAAGAGCGCTTTGACAACCATAACGAAATCTGCCACGTGAACATACTACCTAATGTAAAGCAAAAAGTACTGCCGCGATGTATTCTGTGTATGAAAGACTTCAGCACACGGAAAACTCTAAAACGCCACATCAAGAAGTTCCATAATGACTTTGATGTTGACGAATTGGCCACTTTTGGCTCTCGAAGAAGAACTTTTACAATCGATTGCGAAGAATGCATCAAAAACTTTAGCGACGAGTTTTATTATAACATTTATCAGAAGATAAAGCATTTGCAGGATTCTGTTATTTTCAAATGCGAGTTCTGTCATACTGCCTATAATTCTTTGGAGTATGCTATACAGAGATATAAGATGGCTAATGGGGACGCCTCCAAGACTAAAACTATACTCAGTGAGTTGTGTACTACAGAAATGAGCGAAGAAGAAACTGAGTTTTCTGGTTTTGGATCACTGCATGAATTACCTGAAAGTACGACTGATGATATTCAGGTCAAAATGGAGCCAGCTAACATTCTATATGAGGATGATATCAAAATGGAGCCAATATCGCCTTAA
- Protein Sequence
- MYHNQLDFVCDYCSRTFTRKYNLRTHIENCHINSSSHCDICGQNFGSPAGLQLHLSRGHNHYGQPFPECELCGRIFTRKQNIMSHMITVHLQGLGDDIRCRLCDKPFTTERNLKRHMNQQHNPDMEYPTCHYCTKVFRGKHSLIAHIQSVHSSQEKDVIKCHLCEKVYTNTRNLKRHVEMFHGEKGEFRCDICPKVYTSNQSLRRHLRTTHSTDSHEQFGCSYCGKVIIGKENFESHMQYNHYQQVEVEVKIENDIICEICHQSYEEETQLRQHIKMQHSFKAFYKYCKKVLVKQYGMEYVNNIYNCEFCQHSFPTVYELKDHMRVNHDTEYSLSTCNVCFNKFYSKETMKAHKKVCLPPADVNSCSHCDKLFTDISSLEFHSRIFHPQAQIADSNISSTNIEEEVSCFKCEHCDRMYYSDRSLKHHIKLKHTSDEQVECTYCGKICSNKYYLASHIKIVHNNDTWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALTIHLNTKHLAEDEIYKCEQCNLVFKGQERFDNHNEICHVNILPNVKQKVLPRCILCMKDFSTRKTLKRHIKKFHNDFDVDELATFGSRRRTFTIDCEECIKNFSDEFYYNIYQKIKHLQDSVIFKCEFCHTAYNSLEYAIQRYKMANGDASKTKTILSELCTTEMSEEETEFSGFGSLHELPESTTDDIQVKMEPANILYEDDIKMEPISP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00677880;
- 90% Identity
- iTF_00677880;
- 80% Identity
- iTF_00677880;