Emi047715.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- Hr39
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000493.1:1581018-1611657[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.13 3.8e+03 -0.8 2.3 83 175 119 219 43 238 0.51 2 4 1.5 4.3e+04 -4.3 4.2 125 169 271 314 259 361 0.49 3 4 9.2e-08 0.0027 19.4 0.1 1 20 440 459 440 466 0.91 4 4 7.1e-65 2e-60 207.6 0.0 150 408 491 758 466 758 0.85
Sequence Information
- Coding Sequence
- ATGAATCCCGCGATGAGCAGTGAGGGCGACGCGGTGAAGGTGGAGGGGGGACACGTTTCGGTGACCACTATCAGCATGTCAGGACCAGAAACTAGTAACGGCCAGTTCTCGTATAGTTCGAGCGGGGTCCGCATCAGCGTGTCTTCGGAGCCTCACGATGAAGACTCCACTGATGCTGAAATCTCCAAAATCGACTTCACACAACATCAATACGAGGTTAATATGCGTAACAAGAAGAAGCGGTCATCTAGCGGAGCGCACTGCGAGCTAGCGAGCAACGAGCGAGAGCGACCTATGTCGTGGGAGGGAGAGCTATCGGACTCCGAAATGGTTATAGACACCAGCGTCAACAATGACGAGAACAGCAGTTCTCTAGACCTGCAGTCGTCGCGGGACTCGATCGACACGCTGCGCAACGTGACAATCAAGACGGAGCCGCTGAAGAGCGAGGGCTTCCAGGACGAGCGCGTGCTGGACCTCAAGTACAGCGCGCCGCTGCAGCCGCACCAGCGGAGCCTCAGCATGAACAGGATATCAGTACTAACAGACGCCTCAACGCTGTCGCTCCCGCGGCGGCCATCTTCCCCGACCAGCAGCGCGAAGTCCCTCGCGCTGAGCGACCAGGGCTCCGCCCCCGTGCCCCACGCGCCTCTCGACCAGATCCACAACCTGACCATCAAGAAAGAGAGCCAACTGTCTGAGCTAAAGTGCGAAGGCTCGGTGGGTATGGAGAAGCTGATCGGCGCGCTGCACGGCTCGCCGCTACTGGGCCGACTGCCGCGCGTGCAGTCCAGCGCTAGTACCGACTCCGCCGTGCACTCCATGTACACGCACAGTGTATACAGCAGTCCGTCAGCGAGTCCCCGCGCGTCGCGTCACTACACGCCGTCTCTGTCGCGCAACAACAGCGACGCGTCGCACTCCTCCTGCTACTCCTACAGCTCAGAGTTCTCGCCCACGCACTCGCCCGTACAGGGTCGGCACCCGGGCGTGTTGTACCGCGAGGCGGCGGCGGCGTACGACACCCCACATGACGAAGAACAGGACACTCAAGACGACAGGCTGCACCACCATCAGGGGATCAGCAGACAACAGCTCATCAACAGTCCGTGTCCAATCTGCGGTGACAAGATCAGCGGTTTCCACTACGGGATATTCTCTTGCGAGTCGTGCAAGGGTTTCTTCAAGCGCACAGTGCAGAACAGGAAGAACTACATGTGCCTGAGAGGCGGCAACTGTCCCGTAACCGTCACCACCAGGAAAAAGTGTCCTGCCTGCCGGTTCGACAAATGCCTGGGATGTGGGATGAAACTTGAAGCGATCCGCGAGGACCGCACGCGCGGCGGCCGCTCGACGTACCAGTGCTCGTACTCGCTGTCGGGCGCCGCGTCCACGGGCTCGCTGCTCTCCGCGCATGCGCCCACCACGCTGCGACACGCCTCCAGCCTCACGTGTGTAAACGGACCAGGGTCTTACAGCAGCCGAGGGGAATCTAGCAACAGCCAAGTAACTCCCGATATACCACCATTATTACAGGAAATAATGGACGTGGAGCACCTGTGGCAGTACAACGAGTCGGAGCTGAGCCGGCTGGGCAAGTCGGCGGGCAGTCCGTCCGCGAACCCGCTGCTGGCGGCCAGCGGCATCACGGCGCACAACTCCAGCCCCGACTTCCTCGCCGACCTGTGCAACATCGCCGACCACCGCCTCTACAAGATCGTCAAGTGGTGCAAGAGTCTGCCGCTCTTCAAGAATATATCGATCGACGATCAGATTTGTTTGCTGATCAACAGCTGGTGCGAGCTGTTGGTGCTGTCGTGCTGCTACAGAGGAGTCAGTACCCCCGGGGAGGTCAGGGTCGGCGGAGGGAGAGGCATCACTCTACATCAAAGCGCTAAATTGGGTTTGACGCCTTGCATAGAGCGTATGCTGAGCTTCACGGATCACTTGAGGCGGCTGCGGGTCGACAGATACGAGTACGTCGCACTCAAAGTCATCGTACTTCTCACTTCAGACGCGCCCGATCTGCGCGAAGTGGAGAAAGTACGAGCGTCTCAAGAGAAAGCCTTGGCCGCACTGCAAGCGTACATCGCGACTCACTCTCCCGGCACACCAGCCAAGTTTGGAGAACTATTACTACGCATACCCGAACTGCAAAGAACTTGTCAGTTCTTCATGCAAGTCGGCAAAGAAATGTTGAACCCTGCCAACAAAAGTAAAGACGGCGATGGACCAAGCTTCAATCTACTTATGGAGCTACTCCGTGGCGACCATTGA
- Protein Sequence
- MNPAMSSEGDAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSEPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGAHCELASNERERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPLKSEGFQDERVLDLKYSAPLQPHQRSLSMNRISVLTDASTLSLPRRPSSPTSSAKSLALSDQGSAPVPHAPLDQIHNLTIKKESQLSELKCEGSVGMEKLIGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPGVLYREAAAAYDTPHDEEQDTQDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVTTRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHAPTTLRHASSLTCVNGPGSYSSRGESSNSQVTPDIPPLLQEIMDVEHLWQYNESELSRLGKSAGSPSANPLLAASGITAHNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPDLREVEKVRASQEKALAALQAYIATHSPGTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00042698;
- 90% Identity
- iTF_01076559;
- 80% Identity
- iTF_00677761;