Emi029397.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euclidia mi
Gene Symbol
PAXBP1
Assembly
GCA_944738845.2
Location
CALYKX020000262.1:2634288-2678369[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00038 6.6 8.5 0.0 5 60 525 582 521 583 0.85
2 8 0.00075 13 7.5 0.0 6 60 576 632 571 633 0.84
3 8 0.00075 13 7.5 0.0 6 60 626 682 621 683 0.84
4 8 0.00075 13 7.5 0.0 6 60 676 732 671 733 0.84
5 8 0.00075 13 7.5 0.0 6 60 726 782 721 783 0.84
6 8 0.00079 14 7.4 0.0 6 60 776 832 772 833 0.84
7 8 0.00079 14 7.4 0.0 6 60 826 882 822 883 0.84
8 8 2.7e-15 4.7e-11 45.0 0.1 6 190 876 1039 871 1050 0.70

Sequence Information

Coding Sequence
ATGTCGTTGTTTCGGAAGCCTAAGAAGATTCAGCGTCGTATGTTTTGTGCTGATGACGATGAAGATGGGGAACCGGAGCCCCCGCCGCCACCCATCATCAGTCACGAGAGGAAGGAACCAAAGCCTGTAAAGAGCACTCCACAGTTGAGCTTTGTTGACGAAGAGGAAGAAGGGGAAGTATTCAAAGTCAAAAAGTCTTCTCAAAGTAAGAGACTAGCAAAGCGACGGGAGAAGGAGAGAGAGAAACAGAAACATGACTTTAGAACTGATGGTGATAGTAACAAATATGACAGTAATGGATTTGAGGAAAAGAACAACCACGTAGAGGACAGTACGGAAACGAGGCCGAAGAAGAAGGTTACATTGGAGGGTCTGATACTTTCTGGTCGGGAGGCGCTGGCGGCGGACGGCGAGGGCGACGTGACCAGTGGGGAGGGGGAGGACGAGGAGGAAGACTCGCGGGGGTTCCACAAGTATCGGGCGGAGTCGGTGCGCGCCGCGCTGGCCAAGCCCGGCATTCCTGACGCAGCGCTCATCCACGCAGCGCGCAAGACCAGACAGCAGGCGCGGGAACTGGGCGGTGACTTTATCCCGGTGAAGTCTGAGACCACCCCGGGCTCCCGACTGGTGCGGGACGATGGCTCAGGAGACGATGACGAGGAGGAGGGCAGGATCCTCGTCAGGGGACTGGACATGCCCGATGATAAGCCTAAACGTGGCACAGCGGCGGTATCCGAGGAGGAATTGGACAGCGAGGCGGAGGAATGGGAGTCTCAGCAACTACAGAAAGCGCGGCCCGCCATCGTCGACATCACTGGTCTGATGCACACGCTCTTACTTTGCGAAGGCGCCATAGAGGTGAATCCATTCTCGGTGCCGCTGCCGGCGGCGCAGATGGAAGCGCCAGTGGCTTTGAGGCCATTGACCACAGATAATACGACCGCACCTACCTCGGCCACTGAGCTAGTGGATGCTTTGCGGAAACGTCTAATGGAGCTCCGCACAGAGCGTCAAACGCACTCCATAGCTCAAGAGTCACTCCAAGAGCGATTGCTAACAGCCGCGCGAGTACGAGAGAGTCGCGCGGCGCGGTGTTCCGAGCTCGACGCGGCGTATAAACGCGCGCAGGCCATACGCGGGTACCTCACTGACCTCATCGAGTGCCTGGACGAAAAGATGCCTCAACTAGAATCATTGGAAGCGCGTGCTCTGGCCTTGCACAAGCGTCGCTGCGAGTTCCTTGTAGAACGACGGAGAGCCGACCTTAGGGATCAGGCGCAAGATGTACTCGCTTTAGCCGCTCGCGCGGGCTGCGCCAAGCCAGTAGAGTGCGAAGAGAAGACCCGTCGCGCCGCCGAGCGCGAGGGCCGGCGCCGCGCGAGGCGACTCAAGCGCGAGGCAGCCGCCGCGGCCGCCGGCGCCGCGCCCGCGCACCGCGACGGAGACTCCTCCGACGATGAGCTGCCGCCGCACCAGCACCACCACTACAAGCACGAGAGGGATGCGATCCGCGAGCAGTCGTCCCGGCTGTTCAGCGACGCGTTGCCTGCGTGGCGCAGCGTGTGGGGCGTGTGCGCGCGGCTGGCCCGCTGGCGGTCCCGCGCGCTCACGCTGTACACGGACGCGTACGTCGCAGACTGCCTGCCCAAGCTGCTAGCTCCACTGCCTGCCCAAGCTGCTAGCTCCGTACGTCCGACACCAGGTGACACAACCGCTCAATCCTCCCGGCTGTTGGCCCGCTGGCGGTCCCGCGCGCTCACGCTGTACACGGACGCGTACGTCGCAGACTGCCTGCCCAAGCTGCTAGCTCCACTGCCTGCCCAAGCTGCTAGCTCCGTACGTCCGACACCAGGTGACACAACCGCTCAATCCTCCCGGCTGTTGGCCCGCTGGCGGTCCCGCGCGCTCACGCTGTACACGGACGCGTACGTCGCAGACTGCCTGCCCAAGCTGCTAGCTCCACTGCCTGCCCAAGCTGCTAGCTCCGTACGTCCGACACCAGGTGACACAACCGCTCAATCCTCCCGGCTGTTGGCCCGCTGGCGGTCCCGCGCGCTCACGCTGTACACGGACGCGTACGTCGCAGACTGCCTGCCCAAGCTGCTAGCTCCACTGCCTGCCCAAGCTGCTAGCTCCGTACGTCCGACACCAGGTGACACAACCGCTCAATCCTCCCGGCTGTTGGCCCGCTGGCGGTCCCGCGCGCTCACGCTGTACACGGACGCGTACGTCGCAGACTGCCTGCCCAAGCTGCTAGCTCCACTGCCTGCCCAAGCTGCTAGCTCCGTACGTCCGACACCAGGTGACACAACCGCTCAATCCTCCCGGCTGCTGGCCCGCTGGCGGTCCCGCGCGCTCACGCTGTACACGGACGCGTACGTCGCAGACTGCCTGCCCAAGCTGCTAGCTCCACTGCCTGCCCAAGCTGCTAGCTCCGTACGTCCGACACCAGGTGACACAACCGCTCAATCCTCCCGGCTGTTGGCCCGCTGGCGGTCCCGCGCGCTCACGCTGTACACGGACGCGTACGTCGCAGACTGCCTGCCCAAGCTGCTAGCTCCACTGCCTGCCCAAGCTGCTAGCTCCGTACGTCCGACACCAGGTGACACAACCGCTCAATCCTCCCGGCTGTTGGCCCGCTGGCGGTCCCGCGCGCTCACGCTGTACACGGACGCGTACGTCGCAGACTGCCTGCCCAAGCTGCTAGCTCCGTACGTCCGACACCAGCTAATACTGTGGAATCCCCTAGCAGACGAGGATAATGAAGATTACGAAAAAATGGATTGGTACAAATGTCTATTAATGTACGGGGTCCGTTCAGAGCGGACGGAGGATTCGTCAGACTCGGGGTCTGACAGCGAATCCGAACCGAAGCCGGTCACGGAACGATCTGTGAGGGAAGATCCCGACCTTTTGCTCGTACCTACCATACTCAGTAAGGTTGTGCTACCCAAGTTAACAGAGCTGGTGGAGGCGGCGTGGGACCCTATGTGCGTGCGCGCGTGCGTGCGCCTGCGCCTGCTGCTGGAGCGTGCCGCGCACGTGCCCGCGTGCGGCGCCGCACTCCGCCGCCTGGCGACCACAGCCCGCGCCCGCCTCGCCGCCGCGCTCGCTGCCGACGTGTTCCTGCCTGCACTGCCGCCGCAGTTGATGGACGGCGCGGGCGGCTCGTTCTGGCGCCGCTGCGTGGGTGCTGGTGTACGTTTACTGCGCGCCTCCCTCGCGCTGACGGCGCCGCCGCCACTGCTACACGCCGACCCGCTCGTTCTCAAGCTCATAGACACACTGTGCATGGGCGCGGGTGCAGCCCCAGGCCCGTACGTGGCGACAGCGGCGGCGGCGCTGGCCGACACCCTCCCGCGCCACGGAGCCCTGCGCCGCACCGCGCTGCAGCGCCTCGCCGCGCTGGCCACACTGGCGCTACAGCGGCTGGACACTGACAACCCACTGCATTTGTGA
Protein Sequence
MSLFRKPKKIQRRMFCADDDEDGEPEPPPPPIISHERKEPKPVKSTPQLSFVDEEEEGEVFKVKKSSQSKRLAKRREKEREKQKHDFRTDGDSNKYDSNGFEEKNNHVEDSTETRPKKKVTLEGLILSGREALAADGEGDVTSGEGEDEEEDSRGFHKYRAESVRAALAKPGIPDAALIHAARKTRQQARELGGDFIPVKSETTPGSRLVRDDGSGDDDEEEGRILVRGLDMPDDKPKRGTAAVSEEELDSEAEEWESQQLQKARPAIVDITGLMHTLLLCEGAIEVNPFSVPLPAAQMEAPVALRPLTTDNTTAPTSATELVDALRKRLMELRTERQTHSIAQESLQERLLTAARVRESRAARCSELDAAYKRAQAIRGYLTDLIECLDEKMPQLESLEARALALHKRRCEFLVERRRADLRDQAQDVLALAARAGCAKPVECEEKTRRAAEREGRRRARRLKREAAAAAAGAAPAHRDGDSSDDELPPHQHHHYKHERDAIREQSSRLFSDALPAWRSVWGVCARLARWRSRALTLYTDAYVADCLPKLLAPLPAQAASSVRPTPGDTTAQSSRLLARWRSRALTLYTDAYVADCLPKLLAPLPAQAASSVRPTPGDTTAQSSRLLARWRSRALTLYTDAYVADCLPKLLAPLPAQAASSVRPTPGDTTAQSSRLLARWRSRALTLYTDAYVADCLPKLLAPLPAQAASSVRPTPGDTTAQSSRLLARWRSRALTLYTDAYVADCLPKLLAPLPAQAASSVRPTPGDTTAQSSRLLARWRSRALTLYTDAYVADCLPKLLAPLPAQAASSVRPTPGDTTAQSSRLLARWRSRALTLYTDAYVADCLPKLLAPLPAQAASSVRPTPGDTTAQSSRLLARWRSRALTLYTDAYVADCLPKLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLLMYGVRSERTEDSSDSGSDSESEPKPVTERSVREDPDLLLVPTILSKVVLPKLTELVEAAWDPMCVRACVRLRLLLERAAHVPACGAALRRLATTARARLAAALAADVFLPALPPQLMDGAGGSFWRRCVGAGVRLLRASLALTAPPPLLHADPLVLKLIDTLCMGAGAAPGPYVATAAAALADTLPRHGALRRTALQRLAALATLALQRLDTDNPLHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-