Emi059554.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- -
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000682.1:1974813-1975922[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-09 4.1e-06 28.6 0.0 3 35 10 43 8 46 0.93
Sequence Information
- Coding Sequence
- ATGTCTAAAAAACGACAATATGCTAAAGAAGCAATGGATCAGGCACTCAAATTTATTGAGAATAAAGAGGGTTCAATTCGACAAGCGGCAAAACAATTTGGTGTGCCTAGAAGTAGTCTCCAATTTAAAATTCAAAATCCTGACACAAAGTTTAAGTCTGGACCAGATCCCGTGCTAACTGAAGCTGAAGAAAACGCTTTATGTGATTTCATCGTCCAACTATCAAAGCGTGGCTTCCCTCGAAAAAAAGAAGATATCCAATTATGTGTCCAGAATTTTTTACTACAGAATCCGAGACCCAACCCTTTCCGAGACAACAAACCGGGAGATGTATGGTTTAAAGCCTTTCTGAAAAGACACCCTAATATTTCTGTTCGTACATCAGAAGGAGTTACTAATGCAAGTGCGTGTGTTTCAGAACAGGATATTAGAAAATGGTTTCTAGAAATACAGCAGTATATTGTCGAGGAAGAACTAAATGACGTCATTAAAGATCCTAGAAGAGTGTTCAATGCCGATGAAACTGGCTTCAACATTTGCCCGAAAACAGGCAAAGTGTTAGCTGAGAAGGGGTGCAAAAATGTGTACCAGATAGAAAAAGGATCCTCCAAAGAAAACATAACAGTTTTATTTACATTCTCTGCTGCTGGACACGTCTTTAAACCAATGATTATCTATCCTTATAAACGGATACCTGACCGAGTTTCATTAAGTGTACCATCTGGTTGGGGAATAGGGCGAAGTGACACAGGTTGGATGACGGCAGCAGTTTTTTACGATTATATTTCGAATTGTCTGCATCAGCAAATTATAGAAAACAATATCCCACTTCCTGTAATTCTGTTTGTTGACGGACACAAAACGCATATAACCATAGAAGTATCAGAACTATGTCGTCGACTTCAAATACATCTAATTGCGCTTTACCCAAATGCAACTCGCATTCTACAACCGGCAGATGTAGCAGCTTTTCGCCCAATAAAAGTTGCTTGGAAAAAGGCACTGCGCGAGTGGTACGCTGCAAATAATTACCAGAAGAGTTTAACCAAAGAAACCTTTGCTCCATTATACAAACCATTGTCGACTCTTCTTTCAAGAAAGAAACATTAA
- Protein Sequence
- MSKKRQYAKEAMDQALKFIENKEGSIRQAAKQFGVPRSSLQFKIQNPDTKFKSGPDPVLTEAEENALCDFIVQLSKRGFPRKKEDIQLCVQNFLLQNPRPNPFRDNKPGDVWFKAFLKRHPNISVRTSEGVTNASACVSEQDIRKWFLEIQQYIVEEELNDVIKDPRRVFNADETGFNICPKTGKVLAEKGCKNVYQIEKGSSKENITVLFTFSAAGHVFKPMIIYPYKRIPDRVSLSVPSGWGIGRSDTGWMTAAVFYDYISNCLHQQIIENNIPLPVILFVDGHKTHITIEVSELCRRLQIHLIALYPNATRILQPADVAAFRPIKVAWKKALREWYAANNYQKSLTKETFAPLYKPLSTLLSRKKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00622768;
- 90% Identity
- iTF_01367751; iTF_00786699;
- 80% Identity
- -