Dlab012257.1
Basic Information
- Insect
- Dryobota labecula
- Gene Symbol
- -
- Assembly
- GCA_947523025.1
- Location
- OX383294.1:20479377-20480486[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-08 8e-06 26.1 0.0 3 35 11 44 10 50 0.89
Sequence Information
- Coding Sequence
- ATGTCTTTAAAAAAACGCCAATACCCCAAAGAGGCAATAGAAAAGGCTGTTAAATTTATTGAAAACGATGAAGGTTCCATTCGTCAAGCAGCTAAAAAATTTGGCGTGCCCAGAAGTAGTATCCAATTTAAAATACGAAATCCTAACACAAAGTTTAAGTCTGGACCTGATCCAGTGCTTACCGAAACTGAAGAAAATGAGTTGTGTAACTTCATTATACAACAAGCTAAACGAGGATTTCCCAGAAAAAAAGAGGACATACAGATTTGTGTTCAAGAATTTTTGAAGAAAAATCCAAGACCTAATCCATTCCGGAATGACAAACCTGGAGATGTATGGTTCAAGGCATTCTTGAAACGTCATCCTATCATTTCGATTCGGACATCAGAAGGAGTTAGTAACGCAAGTGCACGTGTTTCGGAATCGGACATTAGGAAATGGTTCCAAGAAATAAAACAGTACATTGACGATGAAGGTTTATCCCCTGTCATTCAAGACTCTGCACGAGTGTTTAATGCTGATGAGACTGGCTTTAATATTTGTCCAAAAACCGGCAAAGTTTTAGCAGAAAAAGGATGCAGAAATGTTTATGAAATTGAAAAAGCATCAGCTAAGGAAAACATAACAGTGCTGTTTACATTTTCTGCTGCCGGTCAAGTATGCAATCCCATGATCATCTATCCCTACAAAAGAATACCCGACCGAGTCACGTTGAGTGTGCCATCTGGATGGGGAATTGGCCGCAGCGACTCGGGCTGGATGACGGCTGCGGTCTTTTATGACTATATAGCTAACTGCTTCCACCGAGAACTAACGGAAAACAATATTGCTTTTCCAGTCATTTTGTTTGTCGATGGCCACAAAACGCATATAACATTAGAAGTATCTGAACTCTGCCGAACCTTACAAATCCATTTGATCGCACTCTATCCGAATGCAACGCGCATATTACAACAAGCAGATGTTGCAGCTTTTCGTCCGATAAAAGTTGGGTGGAAAAAGATGTTGCGGAATTGGTATGCTGCATGTAATTATCAAGAAAGTCTCACTAAAGAATCTTTTGCTCCTTTACTAAAAAAAGTTGTAGATTCTATGATTCAACCAAAATAA
- Protein Sequence
- MSLKKRQYPKEAIEKAVKFIENDEGSIRQAAKKFGVPRSSIQFKIRNPNTKFKSGPDPVLTETEENELCNFIIQQAKRGFPRKKEDIQICVQEFLKKNPRPNPFRNDKPGDVWFKAFLKRHPIISIRTSEGVSNASARVSESDIRKWFQEIKQYIDDEGLSPVIQDSARVFNADETGFNICPKTGKVLAEKGCRNVYEIEKASAKENITVLFTFSAAGQVCNPMIIYPYKRIPDRVTLSVPSGWGIGRSDSGWMTAAVFYDYIANCFHRELTENNIAFPVILFVDGHKTHITLEVSELCRTLQIHLIALYPNATRILQQADVAAFRPIKVGWKKMLRNWYAACNYQESLTKESFAPLLKKVVDSMIQPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00622766; iTF_00622767; iTF_01367751; iTF_00677526;
- 90% Identity
- iTF_00622766; iTF_00622767;
- 80% Identity
- -