Emi052912.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- -
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000565.1:1512536-1513348[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-10 9.5e-08 33.8 0.0 3 40 17 54 15 57 0.94 2 2 1.9 1.5e+03 1.2 0.0 12 30 127 150 125 151 0.57
Sequence Information
- Coding Sequence
- ATGTCACGTAAATATGAACGTAAGACTCTTCGAGCTTCTTGGAACGCAGAAAGTTTGGATGAGGCAATGCGACGCGTTCTGAGTAAAGAAATAGGAGTGAATGAAGCTTCAAGGCACTTCAATATTCCATCTCGAACCTTGAGAAGACACCTTAAAACAGGTAGATCGAAAGTGTCTCTTGGACGTAATCCAGTATTTTCTGTAGAGTACGAAAAAAAGTTAGTTGCTCACATAAAAAAACTAGAAAGAGTAGGATTTGCCCCGGAAAGAAAAGACGTGAAAGAAATGGCTTTTCAGTTGGCTAAAAAGCTAAATATAAAAAACCCATTTTCAGAAGAGTCTGAGTCAGCAGGCAATGTCTGGTTTACTGGATTCATGGTTCGCAATCCTGAACTAAGTCAAAGAAAATCGAAAGGATTGTCTCTGTCTCGAGCATATGGTGTCAATCGAGAAGATGTCAAGGAATTTTTTGATTTGTTAGCTACTATTTACGAAGAACATGATTTCTCGAATCACCCTGAAGACGTTTTTAATATGGATGAGTCTGGGATCCAAGTGAATAATAAACCAGGCAAAGTAGTCGCGTCAAACGGAGCTCGAGATGTATACACTCTCACTGGCTCTGAAAAGGGCGAAAATATCACAGTGGTTGCTTGTTGTAATGGTCTCGGCAACTTTCTTCCACCTGTATTGATCTACAAGGGTACCTACAACAAATCACAATTTTCGGAAGGTCTTCCACCAGGATCACAAGTTTTTATGAACAAAAGATCATCGTATATCAACACAGATTTGTTCATGAAATGGTTTTAA
- Protein Sequence
- MSRKYERKTLRASWNAESLDEAMRRVLSKEIGVNEASRHFNIPSRTLRRHLKTGRSKVSLGRNPVFSVEYEKKLVAHIKKLERVGFAPERKDVKEMAFQLAKKLNIKNPFSEESESAGNVWFTGFMVRNPELSQRKSKGLSLSRAYGVNREDVKEFFDLLATIYEEHDFSNHPEDVFNMDESGIQVNNKPGKVVASNGARDVYTLTGSEKGENITVVACCNGLGNFLPPVLIYKGTYNKSQFSEGLPPGSQVFMNKRSSYINTDLFMKWF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01026079;
- 90% Identity
- -
- 80% Identity
- -