Epri084621.1
Basic Information
- Insect
- Euceroptres primus
- Gene Symbol
- -
- Assembly
- GCA_037177015.1
- Location
- JBAGKK010422855.1:11631-15167[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.13 45 6.9 1.1 1 20 101 120 101 124 0.93 2 13 0.012 4 10.3 4.6 2 23 258 280 258 280 0.91 3 13 0.00037 0.13 15.0 0.7 2 23 351 373 350 373 0.95 4 13 6.5 2.2e+03 1.6 7.6 3 23 458 479 457 479 0.95 5 13 0.011 3.6 10.4 1.6 1 23 528 551 528 551 0.96 6 13 0.00013 0.045 16.4 0.7 2 23 602 623 601 623 0.96 7 13 0.02 7 9.5 0.4 3 23 650 671 648 671 0.93 8 13 0.0084 2.9 10.7 3.6 2 23 714 736 713 736 0.96 9 13 0.11 39 7.1 4.2 3 23 751 772 749 772 0.92 10 13 0.00016 0.057 16.1 0.1 2 23 819 841 819 841 0.93 11 13 0.044 15 8.4 1.5 1 23 919 941 919 941 0.98 12 13 0.0002 0.067 15.9 1.4 2 23 956 978 955 978 0.96 13 13 0.0049 1.7 11.4 0.4 1 23 1053 1076 1053 1076 0.98
Sequence Information
- Coding Sequence
- atgacgTCCTCAGTGGTCCAGGAAGTGCGACTGCCCGAACTAACTGAGTTGGACAGCGACGGGTCCAACAGTGAGGACCGAGATGCCAGAAAACGACTTCTTGGAGAAGTTGACTCTGCAGGTCCGAAAAAAAGGCGGAAACAAGCAACCCCCGTGAGATTTCCAACTTCCTTGATGCTGGGTGATCCTGCAGAATCTGAAGAGGAAGAAGATGCAGACCCGGAAGGTAAGCCGAATTCGCCATCAGCAGACTCTCTTCAAGGTCATCCAACAACGAAAGACGagaatttaaatatagaattcCGCTGCCAATATTGTGGTCAATTGTTTGATGGTAAAGCAACCCTCGACCTGCACCTCGAGTGTGAGCACAATTTTGTATCCGCATCCCGAATACCTTCAGAAAGCCAATCACCTCAGCCGCGAAGTCAAGTTCAGATGAGTGTAGAAACGATCAATCAATCAGATCAATCTCTTAATTTGGTTAATCTTCCCAatatcgaaattaaaaatttaacttcctCCTGGCTTTCGGACCAAGTGCAACCTCAGAATCTTAATCAAAGTCAGGTCCAGACCCAAACTCAACAGCAGAATGAAGAATGGTCAACATCTTGCCACATGATACCAAATATACCAGGACTCCCAACTTTTCCAGGAGGATTGCCTCAGTATTTGCCTTTGCCACCAGGGTTTCCTCTTTCGGATTCTAGTCAGATTCATCGAGCCACCTTAGGGCCTGCTCCTGTGAGGATTTTTAATCCTGATGCTTACTGTGATCTCTGCAATAAGGAATTTTGcaacaaatattttctcaaaacgcACAAGGCTAACAAGCATGGCATTTATGTAGACTCTCCTGGTCAGATGACCATGGGAGAGAATAGTGTGGCTACTGGACCACTTTATTCCATGGGACAAATGCCTGGGAATAGTGTTAAGATGGAGCCAATGCAGAAATTAGAAGGTAGTGTTTCTATACCGAGTAGTGTTTCTATACAAACCCCTCAGATAACCCAACCAATATCCCAACCACCTCCACCTAGTATTCCATGTGATGTTTGCCAAAAGAGGTTCAGAAATGAAGAATCAGTTAGAAAACACAAGCAGAAGGTGCATACTGATCAGCCAGATCAACCCAATCAATCGCAGGTTCAGCCAGCAACAGCAGATGATGAGAGGGAGATGCATCATCAAAGTCCAGGAGCGATGGAGATGCTTTTTAAACAGGAGTATGGAGTCGAGCAGGAAGATAATTCTTTTATGCCTCCACCGAGACATCTCTCCCCACAATCTATCCAGCAGGCCAAAGAATCAGGATTCAATGTCGATCGTCTTCGAAGACTAGGTGTCCTGAATCCTGATGCATTTTGTGAAATCTGCTGCAAGGAATATTGCAATAAGTACTTCCTTCGTACTCATAAGATGAAGAGGCATGGGGTAATTATTCAGGACAGCGAAAAACCACCAATTAATCCAGGATCAGCAGCTACCTGGCATCAGGTACAAACCAGCCCCTTGAATTTGATCATCAACGAGGCAGGAAATGGTTCCGAATACAGTGATCGATCGACTGATGAACATGAGTGCAAATCTTGTGGAATGCGATTTCAGACCTTGGGTCTCTATGAATCTCATCGTCAAAGAGCTCATACTAATGAGGAAGAAGTTTCACCCAAGGTGGATTTTGAGCAAGAATCTCTGGAACAACGACCCATCTCGAACAACGATTCCATTTCAGAGGATCTACAAAAGCTTCAGACTATGATTCTACAATTAAATGGTTTGGAGACCAAGATTTCTTCTTGCTCTATTTGTGGGAAGGAGTGTGATTCTAAAGTTAGTCTACGAGTTCACATGATCGAGCATGGTATCACGAGTGAAGAACCAGTTTCACCATCTCAAGGACCTGAAAAGTCCTCAACTCCTCTGAGTTCGACTACCTTCTGCACTCTGTGTGAAAAGGAGTATCAGAATCAGGAAGTTTTGAGAAAACATATCTCTGAAGATCACAAACCAGTTTCATCTTTCGATTCGTCTTCTTTGCCTCAGGTACCATCAATTTCCATGCCCTCGACTCCAACATCCACTGCACCAACACCTGAACGCAAATCTTCATCACTGACTCCAACATCCAGTTACTGCGAGATTTGCAACAAAGAATTGTGCAACAAGTACTTCATGAAGACCCACATGCAACGAATGCATGGTATCGAGATAGAAAATGGAGCTCAGATTGGAGGAGTCATCTGCAACATCTGCAATAAAGAATTGTGCAGTAAGTACTTCTTGCGAGTTCACAAACACAATACTCACGGGATTGTTGAAGAAGGTTCGAATCTTTCGACTAATAATAAGCAGGAGACATTTGATGCCACCAGTTCAGATGATGTAGCTTTGAAACCAGAACAACTAGGTGACTTGAACCACAGATACTTTACTCATTTCACAGAAGTTTGTCCCATTTGTAATAGGAGGTTCAGAAGCATCAAGTGGCTCAAAGCTCACTTGCTAGGTGACCATGGCAAGATGGGAGTTGACAAATGGAGAGAATTGGAACAACAGTACCAATCACCCCACAGGATCACCAACAGATTACCAGGGACTTCTAGAGTCATCCccaattcgaatttaaaaatacccAATGGTTTTGAATCTTCTCAAAGTAAACATACAGACGTGACAGCATCCCTTGGGAACCAGGTTCTCTCCAACTTGTTTGGATCATCAGTGGAAGATCAACAATCCAAAAGCTACAGATGTTCCTACTGCAATTTCTCCACGACTGTTTTACCATTCCTCTTCCTCCATGAAAGATCCCACGTCAATCCACAAGAAACTGTAGCAGAAAATGAAAGAGTCCTTCAGTGTCCTCTTTGTCCTGTCAGCTTTTCTCAACCAGAACTTTTCCATCATCACTTACTAACTCGTCACCAGTTCCCCAATTTTCTCTCTCAATTCCCATCTCCTATTTTCAACAACATGAGGATCGACGCTTTTGGAGACAAGAGCAACGAATCGAAAGAAATATCGGAAATGGAGCCGGAGGAACGTAAACCGTCGAGTCCTAGGGTTCAGAGTCATTTTAATGAAAGTGAATCTTGTAATATTCAGAGGCAAAATGATACTGCCGTACAAGTGACGCCGCAGGGGGTCTACAAATGTGCCCAGTGTGGATATGCAACTGCCAATTTGAACCGCATCAAAAAGCACATTCGGAAAGACCATAAGGCCTTTGGAGAACCGACGGAAAGTGTTATTGCAGAGTTGAGTAAGATTCTCAAGGAGGTAGCAAATAAGCACAAAGTTCCTGCAAGTTACGCGATGCCCCAGGACATGAACTCGAATCCGGAGAAGACGATAATGCAGCCTTTTTTGATTGAAGAACAGCAGTTCCCTCCATCTCAGGATTGTGGCACAACTGGAGGGGAAGAATCTGGACTTACGAAGCGTTTTGCGCCGGCCTTGGTTTACCTGCCAGTTAAGGCAAGAGTCAGTGGCTCTCTCACAGCCTCTTTCACCTTGAGTCCTGCATAA
- Protein Sequence
- MTSSVVQEVRLPELTELDSDGSNSEDRDARKRLLGEVDSAGPKKRRKQATPVRFPTSLMLGDPAESEEEEDADPEGKPNSPSADSLQGHPTTKDENLNIEFRCQYCGQLFDGKATLDLHLECEHNFVSASRIPSESQSPQPRSQVQMSVETINQSDQSLNLVNLPNIEIKNLTSSWLSDQVQPQNLNQSQVQTQTQQQNEEWSTSCHMIPNIPGLPTFPGGLPQYLPLPPGFPLSDSSQIHRATLGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPGQMTMGENSVATGPLYSMGQMPGNSVKMEPMQKLEGSVSIPSSVSIQTPQITQPISQPPPPSIPCDVCQKRFRNEESVRKHKQKVHTDQPDQPNQSQVQPATADDEREMHHQSPGAMEMLFKQEYGVEQEDNSFMPPPRHLSPQSIQQAKESGFNVDRLRRLGVLNPDAFCEICCKEYCNKYFLRTHKMKRHGVIIQDSEKPPINPGSAATWHQVQTSPLNLIINEAGNGSEYSDRSTDEHECKSCGMRFQTLGLYESHRQRAHTNEEEVSPKVDFEQESLEQRPISNNDSISEDLQKLQTMILQLNGLETKISSCSICGKECDSKVSLRVHMIEHGITSEEPVSPSQGPEKSSTPLSSTTFCTLCEKEYQNQEVLRKHISEDHKPVSSFDSSSLPQVPSISMPSTPTSTAPTPERKSSSLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVEEGSNLSTNNKQETFDATSSDDVALKPEQLGDLNHRYFTHFTEVCPICNRRFRSIKWLKAHLLGDHGKMGVDKWRELEQQYQSPHRITNRLPGTSRVIPNSNLKIPNGFESSQSKHTDVTASLGNQVLSNLFGSSVEDQQSKSYRCSYCNFSTTVLPFLFLHERSHVNPQETVAENERVLQCPLCPVSFSQPELFHHHLLTRHQFPNFLSQFPSPIFNNMRIDAFGDKSNESKEISEMEPEERKPSSPRVQSHFNESESCNIQRQNDTAVQVTPQGVYKCAQCGYATANLNRIKKHIRKDHKAFGEPTESVIAELSKILKEVANKHKVPASYAMPQDMNSNPEKTIMQPFLIEEQQFPPSQDCGTTGGEESGLTKRFAPALVYLPVKARVSGSLTASFTLSPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00461104;
- 90% Identity
- -
- 80% Identity
- -