Basic Information

Gene Symbol
TFIP11
Assembly
GCA_037177015.1
Location
JBAGKK010017470.1:4646-10971[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-98 1.1e-93 316.2 17.0 1 275 395 662 395 662 0.98
2 2 0.0042 1.8e+02 3.8 0.0 156 203 673 719 666 749 0.80

Sequence Information

Coding Sequence
atgtctGAAGATGAGATGGAAAGTTTCGAAATCACAGACTATGACCTCGACAATGAATTCAACACAAATCGACCCCGgcgaaaattttccaaaaagcaACAAATGCTTGGAATGTGGGCCGATGACAGTGATGAAGAAGAAACCACAAGTAGACCATCATTCAAAGTTTTTAACAGAGGTCCTAAAAATTACACTGCTCCAGTTAGTTTTATTTCTGGAGGTGTACAACAGGCAGGAAAACCAAAAGAGGAGAAAAAAGAGGATGAGGACGATGAAGAAGAATCAGGAAGACCTCGAAAGGGTGATGCTGATTATGTTCCAAACAGTTCAAGtgaCTCTGAAAATGAAAGTCCTAGCAATATGAGATCCCGTAAAGCATTCTCGATAAATATAGAAGGCGAAATAGCtggtttaagaaaaaagaaggcGCCTCTTAATCCTGCTCTCTTAAAAACTGGTGTGGGAAGCTGGGAAGTTCATACGAAAGGAATCGGGGCAAAACTTTTACTTCAAATGGGTTTCGAGCCAGGAAAGGGTTTGGGAAAGAAGCTGCAAGGTATAAGCGCTCCGGTGGAAGCTCATCTCAGAAAAGGAAGAGGAGCGATTGGAGCCTATGGTCCTGAAAAATTAGCTAAAGTCCCCGaaaagaagaaggaagaaaCGAACGAGGATTCGAAGGAACAAATGGGCAAAACTTCTCAGTGGCGTAAAGGAGACGCAGGAGGTAAAAAGAAAGTTAGGTACTGTTATCGAAGTGTAGACCAAGTTTTAGAAGATGGAAAGCTCCGTCCAAACAGAAAAGCTGCTGTGAGTAGCGAAATGAGCAGAGTCAAAGTAATAGACATGACAGGACCTGAACAGCGAGTTTTAAGCGGTTATCACGCTATAGCAAGTGGCCAACAACGACCTGATGAAACCTTATTGATTTCTGATAAAAAATCCAaagccaatttttctttaccagaACTTCAACACAATTTGAACTTGCTTGTAGACTTATGTGAACAGGATATTATCCAGAATGATAGGAGGAATCGACACCTTAGCGATAGGTTGATTGCTCTTGAAGCGGAGAAAAATAATCTTTCCAAGGTTGTGGATCATCATGGTCAATTGATTGATACCTTAGAAAACGTCTTGACCATCGTCGATCGACTAATGGACGAAAGTAATGAGTTGACTCTGAAGGAAACTGCCGAAGCTTTTAAGAATCTACAAGACAAGTATTACGAGGAGTATAAACTCTATGAATTAGGGGAATTGGCCAGCAGTTTGGTCGGACCAAAAGTTAAGGAATCTTTGGTGACCTGGAATCCATTGATGCAACCGAAACAACCTCTGGAGTTGTTCAAACAGTGGAAGGATATTTTAGAGAATGGGAAAACTACTCTTCAGTCGAGGTCCTTGCATCCTTACGATCAGCTTGTGTGGAATGCCTGGATGCCTTCGATAAGAGGAGCCGTTCTagAATGGACATGCAGACAACCGGATCCTCTCATCGATCTTATAGAACACTGGATGCCTTTTCTTCCAAGctggattttagaaaacattttagaTCTTCTTGTTCTTCCTAAATTAACTCTTGAAGTGGAAGAATGGAATCCATTAACGGATACAGTTCCAATTCATACGTGGATTCATCCATGGCTTCCTCTTTTACGTAACCGATTGGATACCTTGATCTATCCTATAATTCGCCGCAAACTTGGATCTGCATTAGGCGGTTGGCACGCATCTGACAGATCAGCGAGATTAATGCTTGAACCCTGGTCTCAAGTGTTTTCGAAAGGAGACTTGGAGGCCTTCTTGGTGAAGAATATTTTACCGAAGCTTCAGATAGCACTTTCGGAACTCACGATAAATCCACATCGGCAGCTTCTGGACCAATGGCACTGGGTCTACGAGTGGAAAGAACTACTTCCTATTCATATTATGGCAGGATTGCTTGATAAGTTCTTTTTCCCTAAATGGCTGCAGACCTTGGCTCTTTGGCTGAATAGCTCACCTAATTATGATCAGATCACGAATTGGTATTTGGGTTGGAAGGGTTTGCTCAATGAGAAATTACTAGCAGAACCGGTGATAAAAGAGCATTTCAAAAAGGCTTTGGATATGATGAACAGATCCGTTTCTGTACCTCAAGGACTTCAACCAGGAGCTGTGGAACAAGTCTCGTACTTGACAAGTTTGGAGAGAAGCCAGCCACACATTTCACAAATGCCTTCTAATGTCCAACCAAGAGTTGAGAGTATCGCAGAAGCTATGCGGATCGTGAACCAAATACCACACGGATTTAAAGATTTCGTACAGAAAAAATGTGAAGAGAGAGGAATTCTCTTCATGCCTATTCCGAATAGATATCGAGAAGCGAAGCAAGTATATAAGGTAGGGAATTTGCAGGCATACATTGATGGAAATGGTCTTTTCGTCTGCCACGGAGGCACAAATTGGGTGCCAACCAATTTAAACGCTCTGCTAGATATGTGTGAACTATAA
Protein Sequence
MSEDEMESFEITDYDLDNEFNTNRPRRKFSKKQQMLGMWADDSDEEETTSRPSFKVFNRGPKNYTAPVSFISGGVQQAGKPKEEKKEDEDDEEESGRPRKGDADYVPNSSSDSENESPSNMRSRKAFSINIEGEIAGLRKKKAPLNPALLKTGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAHLRKGRGAIGAYGPEKLAKVPEKKKEETNEDSKEQMGKTSQWRKGDAGGKKKVRYCYRSVDQVLEDGKLRPNRKAAVSSEMSRVKVIDMTGPEQRVLSGYHAIASGQQRPDETLLISDKKSKANFSLPELQHNLNLLVDLCEQDIIQNDRRNRHLSDRLIALEAEKNNLSKVVDHHGQLIDTLENVLTIVDRLMDESNELTLKETAEAFKNLQDKYYEEYKLYELGELASSLVGPKVKESLVTWNPLMQPKQPLELFKQWKDILENGKTTLQSRSLHPYDQLVWNAWMPSIRGAVLEWTCRQPDPLIDLIEHWMPFLPSWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHASDRSARLMLEPWSQVFSKGDLEAFLVKNILPKLQIALSELTINPHRQLLDQWHWVYEWKELLPIHIMAGLLDKFFFPKWLQTLALWLNSSPNYDQITNWYLGWKGLLNEKLLAEPVIKEHFKKALDMMNRSVSVPQGLQPGAVEQVSYLTSLERSQPHISQMPSNVQPRVESIAEAMRIVNQIPHGFKDFVQKKCEERGILFMPIPNRYREAKQVYKVGNLQAYIDGNGLFVCHGGTNWVPTNLNALLDMCEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00879629;
90% Identity
-
80% Identity
-