Basic Information

Insect: Eucera pruinosa
Gene Symbol: RREB1
Assembly: GCA_028830335.1
Location: JAMYCR010000007.1:13643773-13651301[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0056 0.71 11.2 0.1 1 23 41 63 41 63 0.96

2 16 0.00054 0.069 14.4 0.6 1 23 77 99 77 99 0.97

3 16 4.2e-07 5.3e-05 24.2 1.0 1 23 105 128 105 128 0.98

4 16 0.012 1.5 10.2 0.0 1 23 222 246 222 246 0.95

5 16 1.3 1.6e+02 3.8 2.4 2 23 252 274 251 274 0.92

6 16 1.8 2.3e+02 3.3 0.6 1 19 330 348 330 350 0.89

7 16 0.016 2 9.8 0.5 1 23 464 486 464 486 0.97

8 16 1.7e-05 0.0022 19.1 0.5 1 23 495 517 495 517 0.98

9 16 0.0013 0.16 13.3 2.8 1 23 523 546 523 546 0.97

10 16 0.001 0.13 13.6 3.1 1 23 922 945 922 945 0.96

11 16 0.0005 0.063 14.5 0.1 3 23 1221 1241 1219 1241 0.97

12 16 0.6 75 4.9 6.0 1 23 1247 1270 1247 1270 0.97

13 16 0.0021 0.27 12.6 1.6 1 23 1308 1332 1308 1332 0.97

14 16 2.7 3.5e+02 2.8 4.8 1 23 1416 1439 1416 1439 0.94

15 16 0.011 1.4 10.3 0.4 2 23 1490 1511 1489 1511 0.94

16 16 1.4 1.7e+02 3.7 8.2 1 23 1517 1539 1517 1539 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0056	0.71	11.2	0.1	1	23	41	63	41	63	0.96
2	16	0.00054	0.069	14.4	0.6	1	23	77	99	77	99	0.97
3	16	4.2e-07	5.3e-05	24.2	1.0	1	23	105	128	105	128	0.98
4	16	0.012	1.5	10.2	0.0	1	23	222	246	222	246	0.95
5	16	1.3	1.6e+02	3.8	2.4	2	23	252	274	251	274	0.92
6	16	1.8	2.3e+02	3.3	0.6	1	19	330	348	330	350	0.89
7	16	0.016	2	9.8	0.5	1	23	464	486	464	486	0.97
8	16	1.7e-05	0.0022	19.1	0.5	1	23	495	517	495	517	0.98
9	16	0.0013	0.16	13.3	2.8	1	23	523	546	523	546	0.97
10	16	0.001	0.13	13.6	3.1	1	23	922	945	922	945	0.96
11	16	0.0005	0.063	14.5	0.1	3	23	1221	1241	1219	1241	0.97
12	16	0.6	75	4.9	6.0	1	23	1247	1270	1247	1270	0.97
13	16	0.0021	0.27	12.6	1.6	1	23	1308	1332	1308	1332	0.97
14	16	2.7	3.5e+02	2.8	4.8	1	23	1416	1439	1416	1439	0.94
15	16	0.011	1.4	10.3	0.4	2	23	1490	1511	1489	1511	0.94
16	16	1.4	1.7e+02	3.7	8.2	1	23	1517	1539	1517	1539	0.98

Sequence Information

Coding Sequence: ATGTTGACGTATGAATTTTATTTAGTTACAGTTAAGAGTGGCCCCGATCAGGGACACGTAAACGAAGCGCAAGCTGATGCTGCATCGTCACCATCGAGTGTCGAGTTACCAGAAAGTGCGCACCCGTGCCCAGCCTGCCCCACCGTGTTACCCTCGTCCAGAGAGTTGACGAACCACCTTCGCGGACACAATTCGTCCCGCAGCACGGACTGCAGTGGCGAGGATGACTACTGCTGCGGTACATGCAATAAAGTGCTCAGTTCCGCGAGTTCCCTGGACAGGCACGTGCTGGTGCACTCCGGGGAACGTCCGTACAAGTGCAAAAACTGCGATATGGCGTTCACCACTAACGGAAACATGAACAGGCACTTAAGAACTGCCCACAGAGGCGCGTCGCCTCACAGTTGCACGGATTCCGAGGGAAGCAGCGATTCCGAGAAACCGTCCAAAAGGCGACACCTCGAAGAGTACAACAACAACGAGATCACCAAGAGGAATTCGCCAGACTTCATCGAGAGACGAGAAGAAAAATCGCCAACCTTGTCAGGGAAAAGAAAGTGCTCCGCTTATTCGAGCGACGGCGAAAGTCAGAAGAGGCGTAAAAGTCTATTGAATAACTCGAGGACCGAAATGAAGGTGAGGCCAGACGATAGTCAGGATGTGTACAATTGCCCGGTGTGCGGAAGACAGGATTTCGCTACGAGTGCCCTGCTGGAAGCGCATTTGGAAAGAAGCCACCCTGAATTCCCAACAAGATGCGATCCCTGTGACTTGTCCTTTAAGAATCATAGGGTATTGAATTTGCATCGATTCATGTTTCATCTTGCGGAGCATTCGATAGGGAATACCGCGAGGAATTTAAGGAACTCGGTGGTAGGCTTCAATGACTTGACGTTCGTTGACTTTTCTTCGGATAAGTTTCCGGCGATCGCCAGGGCGGTTTGCGAGCAATCTCTGCATCGACCGGCTTCTGGAGAAGTCGCCAAGTTCCAGTGCTCCAAGTGTCTGCGAGCATTTCCGTGTAGATCCGCGTTGGATGCTCATGAAAGTGATTGTGGGACGATGAATTCCCAAAGTAGAGCACTCGAGGACAGTCAGTCCAGGAGAGACGATTTCTTCGCTGGTCTAGATCTTCAGAACAAAGCTGCCTTAACAGAGGCAAAGGAAGGAAAGGATCTTGCTGACATTCAGAGTATCATATCCGTGACTTCCGGTCCGATTTTGCAGAACTTCCCGCGATCGGATGCTAGTACGCCTGAAAATAATATCAAATTCAATCCCAGTGTGAGTTCTTCGGGCTCTTCGGGAACCTTCTCCTCGGAGTATCACGAAGAGGAAGCTCAAGACGCGTTTGCAGCCGAGTTCAGGAAGATGAAATTAAAGGGTGAGTTCCCTTGTAGGCTTTGCACAGAGATATTTCCCAACCTGAGGGCCCTGAAGGGTCACCATAGGGCGCACCTGGGCGTAGGACCTGGAATGCCCTATCCCTGCAACATGTGTCCCTATACCAGCACCGATAGAGCCACTTTGACCAGGCATCTGAGATCCCATAACGGTGATAGACCTTACGAATGTTCCCTCTGCAATTACGCTTTCACTACTAAGGCGAATTGCGAGCGTCATGTGAGGAATCGACATGGGAGATTGACGAGAGAAGACATCAAGAGCGTTTTGATCTATCACCCTAACGAAGACTCCACAAACGAGAACGTGGAAAGGAGTTCCTCCAGGATAATAAAGGACGAAGTCAGGAAGAGTCTAGTTTATCCATCGGATCGCGATGATTTTCAACATCCTACTCAAATGCATTATCCTCCAGTGTCGATGGAAGCCAGGGGTGAGATCAGGATAATCGAAGAGGCGAAGATGCACAATTCCGCGATGTCGTTGCACAATGCGAACCATTTCGAGAAGAGTGACGGGTTCTCTAGGCCAGGCCAGTCCATGGAACTAACCCAACGAATCGAAGAGAGAAAAGCCGGTCAGGACACCAAGTCGGACTACCCGAAGCTGGACGACGATCTAGAGTCGAGGTCGTCGGAGGGCAGCGTATCTCTAGTCAGTGATACCAAATCAGATTCGCACCAAAGAATACAAGCTAGTCCGATAAACTTGAAAAAGGGCCTGAACGTGACCGAGACCACCAGCGAAGATGGGCCTTTGGATCTTTCTATGGATGTGCTGGATCTTAGCaagaaatcgaaagaaaagGAGGAGAACGACTTCACTGGTTCTCATGAACAATTTGGAAAGAACCAGAAAGACTTGTACAACGCTACGAGTCATTTGCTGTTGACCGAAGCTCTGTTAAAAGCTGGTCAGGGTACCTCCCAGGCTGCCTCCTTGGAAGCTCTTTACGCTAACGCCATATACAGTAACTTGAGGACATTTCCTGCAGGCGTAGGTGCTGGGATCTTATCACCGTACGTGTTCAATCCCCATATGTTCGGCCAAGACTTCTCCATGAAGGAAAGGTTACAGAAGGAATTGGTGAGAGGTCTGCAATTGACCAGTGGAGGCACTATAGTGGAGCCTCCTATTGGTAGCGCGACGGGATTCACTGCTTTTCCTCAAAACAGAGACATGAGCTCAACCACGACTGATCAGAGTGACTATGCCAAATTGATCTCTTCTAAAATGAATAAAGGTCTGAACCGCGACAAGCCGGATAATTTACCGTCCTCGAACTCTGTGAAAATGGTGATCAAGAATGGTGTGTTGATGCCTAAACAGAAGCAGCGACGATACAGAACTGAGAGGCCGTTTACCTGTGGTCATTGCTCGGCAAGATTTACGTTAAAGAGTAATATGGAGAGACATTTAAAGCAACAACATCCTCAGCACTGGAGCCAGAGACCCAGAGGAGGTCACTCGACGAGGGGAAGACCTCCTTCCAGTCATCCAACACTGTTGCAGAACCTTGGACAGCCTGCGTCTCAGGTTACCCAATCGTATCCCAACATTTTGCCAAAAGTTGAACAGCCAGTAAATTCAGAGTTTACTAAGCATCCAATCTCAGACCAAGTGAAATATGCCATCTTGGCGCAGCAGTTGAAGGCAAATAGAGTGGAAGAGAATGATTCTGAAGAGGAATTAGTGATAGATGAAGATCCACAAGAGAAGGATAACCAGGAATCTCAGGATCCGAAAGAGAACAGCCTGTTGAGAGGACAGTTGGAAGGTACGGAATCTACTaaggaaattgaaaaagaagcAAACAAGGAGTCTATCAAGGATGCCTCAGACGATACTAATACCGAGTCCGCAAAGGACGAAGAGACTGTTGCTGAAGAAGCAAAGACATCCGACACTGATGAACCTAATGAAACAGAAATGCCAGGTGATAAAAGCCCCAGTCGAGTGTCGGAACCAATTGAAGTGAAATGTGAGAAGATGGAGGATGGAGCACCTGATCTGGCCAGTGTCTCAGAACTGTTGGACAATGCCTCCCAACAGTATCAGCAATTTCAACCCCAGTACCTAAGCGACGAAGAAGGCCTGGTGGCGTCTAACAGCGACTGCAATAACTCGGGTAGCGACGAGAAATCTGACTCGGTGACCTCGATAAACTCGGTAAACGCCTCgtcgaaaaaaaagaagaaaaagaagaagaagaagaagaagaagtcaGCTTATTCGATGGCGCCCAATAGAGTGATCTGTCCTTACTGCCAGCGGCCATTTCCTTGGACCTCGTCTCTCAGGAGACATATCCTCACACACACAGGACAGAAACCTTACCAATGCGTGCATTGCTCGTTGCTGTTCACCACGAAGTCGAACTGTGACCGTCACTTGCTAAGAAAGCACAAAGCGAATCCCAACAAGATGCGTCGAGTTAGAAACTCCTCGTCTCCGGACTCCCAAGCAgtgataaataataacaattccTTTTCCATGAGAAATGTTCCTGAAAGGCCTTACAAATGCAACCAGTGTCCCAGCTCAACCTTTTCCACTCTGGGTAACCTGAAGAAGCATCTTTCCACTAAGCACGCCAGGAAAATTAAATCCAGATCGGACACCCCGTCTAGTGAGCCTCAGAACAGTCCTCAAGAGTGCTCGAAGCAGAATAATGAACAAAGTGATTACGATAGCCAATCTTCGAGCGTCTCGGAAGGTATGGAAACTTCCTCAGTGACGGGGGTTCCCAAATCAACCTTGAACACTTCACCATCGATCAACGATACACCTAGGTCGAGAAGACCTTCGCCAAGATCTTCACCTGGACCCAGCGACCTGCCCTTCAAGTGCCACTTATGCGACTGTGGCTTCGCAGAAAGACAAGACTGCTTAGAGCATATAAAGGTGAACCATAAGAGATCCTACGAAATGTTGGTGGCAAAAGGTGCTCTGGATATGGACATCGACACTGTGGAAGATCAACAACAACCTCTGCCTCAACAGCATAACAGCGATGGAGAAGAAAAAAGGGGACGGTTTCCAGATTACAGTAACCGAAAGGTGGTCTGCGCTTTCTGTATGAGGCGATTCTGGTCCGCAGAGGATCTCCGTCGTCACATGAGAACCCACACGGGTGAACGACCCTTTTCCTGCGACATTTGCTGCAGGAGGTTCACCTTGAAGCACAGCATGCTGCGACACAGGAAGAAGCACGAATCTATCGACTCCACGATGTACGTTGGCACCAGCGGCGATGAGGAAAATTCGCCTACTCAACCACCTACGATCACGCCGCGAAGCCAACAGCAACCACCAGTCCTAGTGGCAGCCAATAGCGGAAATCCTCGTATTCAAGACAGAATCTCCTTGCCAACTGTCGCACCAGTTGCAACCGGTGACGCTGCACCAAGTGGACTGATGAGATTTAATCCCTACGAGAAGCTAACAACTCTCACAGGGAAACTAGCCAGCATCCCTCAAAATGTGAATCCAGATGCGAGCGAAAGCACGGATAACGATTTGATTTCCAATCTGCTGGGAATAAGGGACAAGAGCATCATTGATCGGGTGCTCCAGGCATCCGCCGATGACGCCGCCAAGCTTCTTGGGGTGAAACGTAGCCATGAGTGA
Protein Sequence: MLTYEFYLVTVKSGPDQGHVNEAQADAASSPSSVELPESAHPCPACPTVLPSSRELTNHLRGHNSSRSTDCSGEDDYCCGTCNKVLSSASSLDRHVLVHSGERPYKCKNCDMAFTTNGNMNRHLRTAHRGASPHSCTDSEGSSDSEKPSKRRHLEEYNNNEITKRNSPDFIERREEKSPTLSGKRKCSAYSSDGESQKRRKSLLNNSRTEMKVRPDDSQDVYNCPVCGRQDFATSALLEAHLERSHPEFPTRCDPCDLSFKNHRVLNLHRFMFHLAEHSIGNTARNLRNSVVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRSALDAHESDCGTMNSQSRALEDSQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPENNIKFNPSVSSSGSSGTFSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTEIFPNLRALKGHHRAHLGVGPGMPYPCNMCPYTSTDRATLTRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGRLTREDIKSVLIYHPNEDSTNENVERSSSRIIKDEVRKSLVYPSDRDDFQHPTQMHYPPVSMEARGEIRIIEEAKMHNSAMSLHNANHFEKSDGFSRPGQSMELTQRIEERKAGQDTKSDYPKLDDDLESRSSEGSVSLVSDTKSDSHQRIQASPINLKKGLNVTETTSEDGPLDLSMDVLDLSKKSKEKEENDFTGSHEQFGKNQKDLYNATSHLLLTEALLKAGQGTSQAASLEALYANAIYSNLRTFPAGVGAGILSPYVFNPHMFGQDFSMKERLQKELVRGLQLTSGGTIVEPPIGSATGFTAFPQNRDMSSTTTDQSDYAKLISSKMNKGLNRDKPDNLPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCGHCSARFTLKSNMERHLKQQHPQHWSQRPRGGHSTRGRPPSSHPTLLQNLGQPASQVTQSYPNILPKVEQPVNSEFTKHPISDQVKYAILAQQLKANRVEENDSEEELVIDEDPQEKDNQESQDPKENSLLRGQLEGTESTKEIEKEANKESIKDASDDTNTESAKDEETVAEEAKTSDTDEPNETEMPGDKSPSRVSEPIEVKCEKMEDGAPDLASVSELLDNASQQYQQFQPQYLSDEEGLVASNSDCNNSGSDEKSDSVTSINSVNASSKKKKKKKKKKKKKSAYSMAPNRVICPYCQRPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRVRNSSSPDSQAVINNNNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHLSTKHARKIKSRSDTPSSEPQNSPQECSKQNNEQSDYDSQSSSVSEGMETSSVTGVPKSTLNTSPSINDTPRSRRPSPRSSPGPSDLPFKCHLCDCGFAERQDCLEHIKVNHKRSYEMLVAKGALDMDIDTVEDQQQPLPQQHNSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPTQPPTITPRSQQQPPVLVAANSGNPRIQDRISLPTVAPVATGDAAPSGLMRFNPYEKLTTLTGKLASIPQNVNPDASESTDNDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625690;
90% Identity: -
80% Identity: -