Epru023060.1
Basic Information
- Insect
- Eucera pruinosa
- Gene Symbol
- -
- Assembly
- GCA_028830335.1
- Location
- JAMYCR010000017.1:348543-358299[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 7.3e-06 0.00093 20.3 1.0 1 23 218 240 218 240 0.98 2 29 0.0059 0.75 11.2 1.9 1 23 263 286 263 286 0.96 3 29 0.00016 0.02 16.1 0.5 2 23 293 315 292 315 0.96 4 29 0.024 3.1 9.2 0.5 2 21 338 357 337 358 0.92 5 29 1.1 1.4e+02 4.0 0.0 2 23 456 477 455 477 0.94 6 29 0.0044 0.56 11.6 0.6 2 23 484 506 483 506 0.91 7 29 0.00014 0.018 16.3 0.1 1 23 572 595 572 595 0.96 8 29 0.028 3.5 9.1 0.4 1 23 601 624 601 624 0.96 9 29 0.073 9.2 7.7 0.8 1 23 637 659 637 659 0.97 10 29 4.2e-05 0.0053 17.9 0.9 3 23 703 724 702 724 0.96 11 29 0.0047 0.6 11.5 0.9 2 23 784 807 783 807 0.95 12 29 3.7 4.6e+02 2.4 0.0 2 23 816 838 816 838 0.84 13 29 0.08 10 7.6 0.1 2 23 845 867 844 867 0.95 14 29 1.5e-05 0.0019 19.3 1.2 1 23 875 897 875 897 0.98 15 29 1.1 1.4e+02 4.0 0.8 3 23 925 947 923 947 0.83 16 29 0.00025 0.031 15.5 3.3 1 23 950 973 950 973 0.97 17 29 0.00049 0.062 14.6 0.3 2 23 980 1002 979 1002 0.96 18 29 0.0011 0.14 13.5 3.9 1 21 1026 1046 1026 1047 0.95 19 29 0.0032 0.4 12.0 1.8 2 23 1061 1082 1060 1083 0.93 20 29 0.19 24 6.4 1.4 1 23 1086 1109 1086 1109 0.95 21 29 0.031 3.9 8.9 1.3 2 23 1116 1139 1115 1139 0.92 22 29 3.6 4.5e+02 2.4 0.2 2 23 1147 1169 1147 1169 0.94 23 29 0.27 34 6.0 2.7 2 23 1207 1229 1207 1229 0.96 24 29 2.1 2.7e+02 3.1 0.2 2 23 1235 1257 1235 1257 0.95 25 29 6.7e-05 0.0084 17.3 0.2 1 23 1320 1343 1320 1343 0.96 26 29 0.029 3.6 9.0 3.6 1 21 1368 1388 1368 1389 0.93 27 29 0.58 73 4.9 1.3 2 23 1486 1508 1485 1508 0.94 28 29 0.33 42 5.6 0.2 2 23 1515 1537 1514 1537 0.94 29 29 5.6 7.1e+02 1.8 2.6 1 23 1548 1570 1548 1570 0.92
Sequence Information
- Coding Sequence
- ATGGAGCCCAGGGAACGCTACCAGGAGCTCTGCAGACTTTGCGCATCCTACGACGCCGTCAAGATGGACATCTTCGGCCAAGAGGGCAAGAACAGACAGCTCGTTGACAAGATACAAGCTTGTCTCCCGTTTAAGATCGCGGAAGATGATAGATTGCCAAAATGCCTCTGCTATCGGTGTATgtacaatttggaaaatttctATGACTTTAGAACAGCTTGCGTCAATGCAGTGGCCCTCTTGGAAAGGTGTTTGCCACCTTCCGAATCGAATGGAGATATTAGAACCACCTTGACGTTCTGCGGCGATTCGGAGCTGTTCAAAGGACGGGAAAATATCCCGATGTTGATCCCAGAAGCTCCCATCGTGAATCCGAATGCCGCTTTAGGCACACCTCCTAGATTAAATTCCGATGGAGAGGCCGATCATGAGACAGACGAAATTATAGATAACAGTGGCACCGATGAAGCAACGGTAGTAGACGACTCGGAAGATCGCCGTTCAGAGGAATACGAAATGGATATGGAAACGAATCCGAGCGATTTCTTGGAAATGACCTCGATAGTCGCCGAGGATCCCGAAGAGTCGGAAATAAAACATCAGGAATCATCCAGCAATCTGCCCGAGCACGCGTCTCAGCAGCACGAGGTGTACGTCTGCTCGTTGTGCAACAAAGCGTTTAGTTCGAAGGGCCATTTGTCGCTGCACGCGCGAATTCACGTGGGGGCCGGTGACGTAATCGGGGAAAAAGTTCTCACGGATGATCACACGTCTTACAAAAGGCCGTATCAGTGCGATCTGTGTCAGAAATCGTACTCAACCGCGAAGCATCGCTGGGGCCACGTTTCAACCACTCACAGAGGCCACCCTGCAGTGACGTGCGGTTATTGTTCCCGGATCTACTCAACCCGAACAAATTTGGAAGAACATATAAAATCACGTCACGCTGGTCTTCCAGCACCCACGGAGGTTCCGCTGAGCAATGCCTATCGGCCGGCGGAGAGTAGATGCCAGTGCAATGCTTGCGGAAAGATTTGCACCGACCCCATGGAATTGAACCTTCACGGTAGGATTTGTTGCGCCGACGGACAGAGATTAGATCTCCCGGCGAAAAATGACATTAGGGAGAACAAAATTGTGGATAGCTCGGAGGCGTCCAGTATCGCCAGCGATGACGACGGCAAAGATTATAGAAGCGCAGAGGCTAAGCTAGCAAAGAATCCTCAGTTGACAATTTTAAAGCAAGCGTTGACGAAAGGAGATAGTCTTAAGCGAGATTTCGAGGACAAATTTACCACGAACTGCAAGCCAAAAAAATTACCTAGAACAGAAAACGCCGACGTTCAGAATAGCAGCAAAAGATGGTACTGCGAGTCTTGTCCGCAATGGTTCACCTCGGTGGACGATCTAAAGGAGCACGAAGCCATTCACGACGCGGACAAGCCTTTCATCTGCATCCTCTGCAAGAAGGATTTCGTGTTGAAGTCATCGTTGAGCAGGCATATCCAAACGTTGCACGGCGTGGATCCGTGTCCCATAATAGAAAGCGACAAGTGTCTGAAGAAGATCGTCCTGCAAAATTGGAACGAATCCATGGACCTCGATCTATACGAAAGCAAACCCTCGGAATTCCCCCTGTCGCCAGAAATGAACGCGGAGAACGAGGAAGATCACGAGAGCGGGCAAGAAAACCTGATAGAGATCGAAACCGTGTTCGTTTGCGAGATTTGCACGCGCGACTTCAACGATCGTGCCTCTCTCTGGCTTCACATCCGCGCCACTCACAAAGAGTTCGCCGCGTTCGCTTGCGGAGTTTGTCTAAAGATCTGCGCGGACAACACTCAGCTGCTGAATCACGTGAACATGTACCACGGCGGATCAAAGCTGCTGCTCTCCGAGCAGCGAAGGTACAGCTGCACGATTTGCGGCCGACAGCACGATTCCAGAAAGAAACTGATCGCCCACGTGTCCATTCACAACGTCGATCCGAATTACGATCCCGCCACGTTCGTCCAGCTGAACAGCAACTATTACGGGGAAAATATGAACGGAACCGAAGCCGCGGAGCAGATCCTCGACTACGAAGACGACGGAGACAAAGTGGACTGCTACATCTGCTACAAATCGTTTCCAAACGAGGACCATTTGATCCGACACCAGAGGAACGCCCACAGATCGGATCAGCTGCTTCCAACCGGAGATCCTATGAACCCGTCCAGTTTGAATGGCGGCGGAAACAGAGCTCAGTACCATTTGTTCTTCGTGTGCGAGCTATGCGGCAGCTCGCATCCCAGCAAATGGGAGCGCTGGCTCCACGTGAGCTCCTCACACGGCAACGAACCGGCGATCAAGTGCGATCGCGAAGATTGCGGCAAGATATTCGCCACGAAATCTCTTAGGAACGAGCACGTTCAACATCACGCCATTCAGGGATCCTCGCCGAACACCTGCGAGATCTGCGGCAAGCTTTGGGGCAGCCGAGTAGATTACTGGAAGCACGTCATGGGCGTGCACTCGGACACCGTTCCCCTAATCTGCGGCGTCTGCTTGAAAGTATTCCCCAACGTGTTGCAGCTGAGCGCTCACGTGAAATCGAAACACTGGCCGCTGACCAATGGCGACTTCAGCTGCGACATTTGCGGCAGACCGTACTCGAACAAGTCGAAAATGTCGAGGCACAGAAAGATTCACGGGTTCGAGGAGAGCTGCGATAACGGCGCGGAGAACAGCGAAAACAAAGCGGATGGACGAGTCAGGGAAACGGAGCTGAGCTGCGAATTGTGCGCGGACTTGAAGTTTTCCAGCTTGGAAAAGTTATGCAATCACAGGAGAATCGTTCACGGCCTCTTCCCGTGCGATCTCTGCAACAAGTGTTACGGGAGAACGTCGCACCTGTGGAAACACGTGAACAGAGTTCACAAGGGCCACGAGGACGTCACCTGTCCTTACTGCTTGAAAACCAGCGCCTCTAAAGATCATCTAGCCGCGCACATTTCGAAGATTCATCGATACGAGCCCGACTCCAGGAAGGATGGAAAAGACAGCAGGCAATTTAAGACGGAGGAAGCTAGCTTGCATTACTGCGAGAAGTGCAACAAAGGCTTCCATAAGCGCTATCTCTTGCGCAGACACATGAAAGGCTGTCAGAACTATCGTAAAGATCCAGGCGCGTTATTAACGAGATGCCGAGCCTGCGAGAGAATATTCAAAGACCGCGCGAGCTTGCAGAAGCACATCGAGAATCATCACAGCACCTACACGTGTCACCTGTGCAACGAGACCGTAACTTCGAAATTGGGGATCATGACTCACAACAGGGTGAAACATATGGACCATCCGGACTTGACTTGCAACTTTGGCTCGTGTAGAAAGCTGTTCAGGACCAAGGAAGACTTGGAGTCGCACAGAAAGGACCACAGGTATCACACAACTCCAAACGTGTGCGACTTTTGCGGCGACACGGTGGAAAATAAGCTCAAGTTGAAGATGCACGTGCTGTCCCTTCATCGGAACGAGATCGGAGTTTCATGCGGGGTCTGTTTGATTCCGATGAAGGATCCCAAGGAGCTGAAGGGTCACGTGGAGGAGGTTCACGCGAGCGTTTTGCTGCGGCCGAACACTTGCCAGGTTTGCGGGAAGCAGTACGCTTCGAAGTGGAAAGCTTTCGATCATACGAAAAAATGCCACGGGAAAGTATTCAGGACCTGCAAGCAGTGTTTGGCCGTTTTCACCGAGGACTCGTTGATCAGGGATCACTACGAGACGGTGCACAATATTCCTAAAGATCAGCTGGCCGCGTTCGAGCACAGATTGGACATCGGGTCGAAGAACGAGGACTTCGAGATGGAGTCTGCCGATATAGTGGTGAAAGAGGAGCCGGACGATCTGGAGTACGACGTGGACATGTGCGACGAGGATTCCAGCGACTCGAAGCGGAGGAGATCGCTCACGGACACGTACGACTGCGAAATGTGCCCGGAGATGTTCGTGAACAGCGACGCGCTCTCGAAGCACTATCGGAACATGCACAACACCGATCCGGAGAGAATGTTCAAGAGGCTGAAGCAGGACGAGCAGAGGAGGATGCGCGGCAAAGTGAACTTCTTCTGCAAGAACTGCAAGCGACAGTTTTGCACCAAGACCTTGTACTGGAATCATATCGCCACTTGCAGAAGAGTCGCGCGAAAAGAGGAGGAACTGTTGCCGCTGCAGAGCGACATGCTTCTCGGCAATCGAGAGGACGTTCCGAAGAACAACAATCAGATCAAGAAAGAGGAGCCCACGTCGAACTTGAATATCCCCGACTTCAATCTATTCGAGGATATCAATCTTCAGCTGTCCGGTCAGCGGCCTCTTCCCAATCTTATGCCGCTCTCCCAGAGGACGAAATCTTCCATGAAGTGTTCGAGAAAGGATTCTAGGAAAGTGTACGACGAGTCGACGAACACGGAGTGCGCCTGCGAAGTATGCGGCAAACAGTGGCCGGCCAAGAAACATTTATGGCAGCATCTGATTCGCTTCCATCGGGCGGAAGCTGCGGTCACTTGCGGGGTGTgtttaaagctttgcaaagaTTACGACGATCTGGCGGAACACTTGAAGGCCGCGCACGAGGCGATCCTTTCCACCGAGGGGAACAACTTCACGTGCAAAACTTGCGGCAGGTACCACAACGCGCGCAGCAAGCTACTGCTGCACACGAGCATTCATATCGGCCACGCGGGGACCAGCACTTGGTGTCCGAAGTGTCGCAAGAATATCACCGACGAGGCTACTCATTCAACGAACTGTATCGGCAAGACGGAGGAGGGCGAGCAGCTGAAGAACACCGTGAAGACGGAAGGAAGTCTAATAGCGGACGACGGGATGATCGAGGAGGTGGAAGAGGAAGGGGACTTCGAGTCGGAGgcggaagaagaggaggaggcgGACAGCGAAGAATCGGAAAGCGGCAGCAGCACCGAGGCAGAAGAGGAAAACGAATCGGAGGGGGGAGAGTCCAGGGCAACCGGGGAGATTACTTACAACTCGGAAAGCGAAGACTCGGAGGAATTGGATAATTTGGAAATCGTCGACGAAAAGAACATGGAACATTACACTTTGGAGCGTCTTCAGGAAAGTAAGAGCACGGAAATGAAGAAGCACGACGCAGACGCGTCGGACGACGACGGACCTCCGGTTTTGAGCCCCGTCATGCCTTTGCTTGCCGAAAACTCGAACACGGAGCAGTCGATGTCTCGCCAAATTAGCTCCATGGTATCATTATCCGGGAAGAAAGTAGAGGACGCGAACGATTTGTCCGAGACTCATAGCCACTCCTCCCCAAAGTCGGTTAATTTATACGAGAAGCACTTGCTGAACAGCACCGCGTTGCAAATAGAGTCGGAGGCGTTCGCGAATCGCAGCGACGAGGAGTTCGAAGACGGGAAGAACGAGTCCGACGAGAATTCTCTGGAGGAGAACGAGGAAGAAAACGAGGAGATGGAAGAGTACGAGGAGAACGAGGCAAACGAAGACGCGGAGGAGACCGAGGAGAACGAAGAGCTGGACGAGAACGAAGTTGAATTGAACGAAGAGGAAGTCGAAGAGAACGAGAAGATGAAAGCGCGCGAAACCGAGCAGATCGACGACAACGAAGAGGACGACGAAGAGGCCGGCGAGTACGAAGAAGCGGAGGACAACGAGAGGAACGAGGAAATGGAGGAATCCGAAGAAGACGAGAGGAACGCAGAGATGATAGAAGAATCCGAAGAAAACGAGAGGAACGAAGAGATGGTAGAAGAATCCGAAGAAAACGAGAGGAACGAAGAGATGGTAGAAGAATCCGAGGAAAACGAGAGAAACGACGAGGCAGAGGAGCACGAAAGAAACGAGGAGATGGAGGAATCGGAAGAGCaagaaaggaacgaagaaatggaagaagagTCGGAAGATCAAGATGAGATGGAAGAGATGGACGAGAACGACGAGAACGAAGAGATGGAAGAAAGCGACGAAAGGGTGGAACACATGCAGCTAGACGATCTGGAGGGCGCCGTGTTGATGGTGACGGAAGGAGATCATCAGATCCTGATCCAGCAGCAAATCCTGGAAGACGAGAACTCGAACTCGAACCAAGAGTACGTTTATTCCGCGCTCAGGTACAGCACGGAGGAGGACAGCGAGGACGCGAGGAAATGA
- Protein Sequence
- MEPRERYQELCRLCASYDAVKMDIFGQEGKNRQLVDKIQACLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPSESNGDIRTTLTFCGDSELFKGRENIPMLIPEAPIVNPNAALGTPPRLNSDGEADHETDEIIDNSGTDEATVVDDSEDRRSEEYEMDMETNPSDFLEMTSIVAEDPEESEIKHQESSSNLPEHASQQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVLTDDHTSYKRPYQCDLCQKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPAPTEVPLSNAYRPAESRCQCNACGKICTDPMELNLHGRICCADGQRLDLPAKNDIRENKIVDSSEASSIASDDDGKDYRSAEAKLAKNPQLTILKQALTKGDSLKRDFEDKFTTNCKPKKLPRTENADVQNSSKRWYCESCPQWFTSVDDLKEHEAIHDADKPFICILCKKDFVLKSSLSRHIQTLHGVDPCPIIESDKCLKKIVLQNWNESMDLDLYESKPSEFPLSPEMNAENEEDHESGQENLIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICADNTQLLNHVNMYHGGSKLLLSEQRRYSCTICGRQHDSRKKLIAHVSIHNVDPNYDPATFVQLNSNYYGENMNGTEAAEQILDYEDDGDKVDCYICYKSFPNEDHLIRHQRNAHRSDQLLPTGDPMNPSSLNGGGNRAQYHLFFVCELCGSSHPSKWERWLHVSSSHGNEPAIKCDREDCGKIFATKSLRNEHVQHHAIQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSAHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGFEESCDNGAENSENKADGRVRETELSCELCADLKFSSLEKLCNHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCPYCLKTSASKDHLAAHISKIHRYEPDSRKDGKDSRQFKTEEASLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETVTSKLGIMTHNRVKHMDHPDLTCNFGSCRKLFRTKEDLESHRKDHRYHTTPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKELKGHVEEVHASVLLRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTEDSLIRDHYETVHNIPKDQLAAFEHRLDIGSKNEDFEMESADIVVKEEPDDLEYDVDMCDEDSSDSKRRRSLTDTYDCEMCPEMFVNSDALSKHYRNMHNTDPERMFKRLKQDEQRRMRGKVNFFCKNCKRQFCTKTLYWNHIATCRRVARKEEELLPLQSDMLLGNREDVPKNNNQIKKEEPTSNLNIPDFNLFEDINLQLSGQRPLPNLMPLSQRTKSSMKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKDYDDLAEHLKAAHEAILSTEGNNFTCKTCGRYHNARSKLLLHTSIHIGHAGTSTWCPKCRKNITDEATHSTNCIGKTEEGEQLKNTVKTEGSLIADDGMIEEVEEEGDFESEAEEEEEADSEESESGSSTEAEEENESEGGESRATGEITYNSESEDSEELDNLEIVDEKNMEHYTLERLQESKSTEMKKHDADASDDDGPPVLSPVMPLLAENSNTEQSMSRQISSMVSLSGKKVEDANDLSETHSHSSPKSVNLYEKHLLNSTALQIESEAFANRSDEEFEDGKNESDENSLEENEEENEEMEEYEENEANEDAEETEENEELDENEVELNEEEVEENEKMKARETEQIDDNEEDDEEAGEYEEAEDNERNEEMEESEEDERNAEMIEESEENERNEEMVEESEENERNEEMVEESEENERNDEAEEHERNEEMEESEEQERNEEMEEESEDQDEMEEMDENDENEEMEESDERVEHMQLDDLEGAVLMVTEGDHQILIQQQILEDENSNSNQEYVYSALRYSTEEDSEDARK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00218574;
- 90% Identity
- -
- 80% Identity
- -