Epru022411.1
Basic Information
- Insect
- Eucera pruinosa
- Gene Symbol
- dmrt1
- Assembly
- GCA_028830335.1
- Location
- JAMYCR010000016.1:6629807-6631395[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-26 4.4e-22 78.5 11.2 1 47 20 66 20 66 0.99
Sequence Information
- Coding Sequence
- ATGAAGACCGAGGGTGGTAATTCGAGTCAAGTGAATTCGGGGATCGAGCAGCGTTTGAGAAGTCCGAAGTGCGCCAGGTGCAGGAACCACGGTGTGATTTCCGGTTTGAAGGGCCACAAAAGGTCGTGTGCATGGAAGGACTGTCGTTGTCCTTGTTGTTTGTTGGTGGTCGAAAGGCAACGGGTGATGGCCGCGCAAGTTGCGCTAAGAAGACAACAGCAAGCTCAAGGGAATTTTTTCGGTGAAAATGTTTCGACCGTCTGTCACTCGCCGATCGATACCGGTTCACCGTATCTGTTGAAAAGCGATCAAGCACCTGTGTGTCGAAGAGGGAAGAACTTCCAGCGGCATCAATTGCACTTCACGCAAACCAGCATCAGCGTAACGCAAGGATTTTACGGATTAAAAGCGATTCACGGTTTACCAGCAGCATTTACCGCAGACACTCCATTGTTGAATGGCTTGTCGCCGAATCAAGAATACAAACAAGAATCCGAGAGTTCAAAAAAGATGCAGCCTTTCCCGAGTATGTATTCCGCGATTCCGTGGTTCGAACAAGTCACGGAACCTCGTAAGATGAAGAAAAGCTTTAACAATTTTACTTCCCCTGTGAATGATGATGTTCCTGCGACTAAAAGTGGACCTTGCTTGGAGAAGAAATCCACGATTTCTTTTAGCGTGGAATCTATCATCGGAACAAAGTGA
- Protein Sequence
- MKTEGGNSSQVNSGIEQRLRSPKCARCRNHGVISGLKGHKRSCAWKDCRCPCCLLVVERQRVMAAQVALRRQQQAQGNFFGENVSTVCHSPIDTGSPYLLKSDQAPVCRRGKNFQRHQLHFTQTSISVTQGFYGLKAIHGLPAAFTADTPLLNGLSPNQEYKQESESSKKMQPFPSMYSAIPWFEQVTEPRKMKKSFNNFTSPVNDDVPATKSGPCLEKKSTISFSVESIIGTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00232623;
- 90% Identity
- iTF_01539625; iTF_01424404; iTF_00232623; iTF_00221281; iTF_00232001; iTF_00233249; iTF_00217093; iTF_00684806; iTF_00217767; iTF_00219816; iTF_00225256; iTF_00982312; iTF_00221929; iTF_00231337; iTF_00983626; iTF_00214411; iTF_01419020; iTF_00218445; iTF_00223213; iTF_00982989; iTF_00215727; iTF_00222544; iTF_00225937; iTF_00228691; iTF_00230708; iTF_00227990; iTF_00226616; iTF_00220601; iTF_00223897; iTF_00684186; iTF_00873818; iTF_00219133; iTF_00227294; iTF_00229374; iTF_00216416; iTF_00224576; iTF_00230048; iTF_01417728; iTF_00215042; iTF_01418372; iTF_01420299; iTF_01419661; iTF_01420953;
- 80% Identity
- -