Epru003266.1
Basic Information
- Insect
- Eucera pruinosa
- Gene Symbol
- bab1
- Assembly
- GCA_028830335.1
- Location
- JAMYCR010000002.1:20993235-20996349[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.7e-05 0.083 13.4 0.0 2 38 201 237 200 243 0.84 2 4 4.6e-11 1e-07 32.3 0.0 5 39 254 287 251 294 0.85 3 4 0.13 3e+02 2.0 0.0 21 34 321 334 307 339 0.80 4 4 1e-12 2.3e-09 37.6 0.1 4 39 365 400 362 405 0.93
Sequence Information
- Coding Sequence
- ATGTCCAAGATTGCTAACCAACATGAGATTAATCAGAGCTACTGGTTTAAGTGGAATGATTATCAAAGCCATTTATCCAATGTAGTTAGACAACTTTTGGACGAAGATTGTATGGTGGATGTTACCCTGGCTGCTGCTGGGGAACGTATTCATGCCCATCGCATAGTTCTCTGCGCTTGTAGCACTCTGTTTCGAgaaatattGAGTCAAGTAAATGAAGATCATCCAACAATAATATTAAGCGATATATCTGCTCAAGACATAAAATCTATCATAGAATTCATTTATCACGGGGAAGTGAGAGTACCAGTTGAGAATATTAGTAACTTATTAGATGCTGCACGTTCCTTAAAAATCTCTGGTCTTATAGAGATTGATGGACTTGAAGAAAGTGAGTCTATGGTAAGCAATAAAGATTTCAATGATAACAATGAGGAGCCAATGACTGTTATTAATGAGACTGAAGAAAATGTTATTGAAGCATTGCAAGAAGATTATAAGGAGGAGTCAGAGGATCAACAAAAACCAGAAATCGTTGAAAATACTCGTTTgagtaaaaagaagaaacgcaGACGCGATACCGCTAAGAAAGATTACAGCGATGATATGTTAGCGTCGGCGATTAATGATTTAAAATCAGGCCAGACATTAATAGAAGCGTCCACTAAGAACAATGTACCGCGTTCAACTTTGTACATGCGGGCTAAAGCGTTAGGTATACATTTGACCGCGTCGAGAAATGAATATCCGGCGGAGTGTATGAGAGCTGCTATAAACGCGGTAATCGGTGGATCAAGTTTGCAGCATGCATCAGAAATGTTTAATATACCCAAAACTGTATTATGGAGGAGGATTCAAAAAGAGGGATATCAAATATTACGTTCTGAGATGAAAAAATCTTATGGCTCGGACAAACGAGAAGCTGCAGTTAAGGCTTTAGAGAGAGGAGAGAATCTGACGAAAGTTGCGCTTGAATTTAAAATACCAAAAACTACTTTATTTAGGGACAAAGCTCGATTAGTAGATGAGGGAAAATTGCCATTGTCATTTTGGAAAAAGCGTAAAACAGAAAATGAAGGATTAAAGAAATCTCGTTTGGAAGAAGCTGTTGCTGCGTGTAGAGGAGGAAAAATGTCGCAAGCAGCGGCATCGATGACCTATCATATTCCAAAGACAACTATATGGAGGCGTCTTCAGCAGGATGGTAAAAAGTCGGAACGTTCGTTAACTTCGAGGAAGCAAAAAGTAACGGATTCTAAGCATAACACGCAAACGAAGGTAGAAGGATCTGATTTCACATACTGCGAGGTTTCGTCGGAAATTCCTATAACTTACATAGATGAAAATAGTATACCAGAAGATTCTGTGATAATATTAACAGCAGCAGATATGGATGGACTGAATTTAGAAGGGCgacaaattattgttaattctGACTCAGGGCAAGGGTACATTCCTTGTGCTATAAGTattgaagaaaattcaaattattccCAGACGGAAAGTTAG
- Protein Sequence
- MSKIANQHEINQSYWFKWNDYQSHLSNVVRQLLDEDCMVDVTLAAAGERIHAHRIVLCACSTLFREILSQVNEDHPTIILSDISAQDIKSIIEFIYHGEVRVPVENISNLLDAARSLKISGLIEIDGLEESESMVSNKDFNDNNEEPMTVINETEENVIEALQEDYKEESEDQQKPEIVENTRLSKKKKRRRDTAKKDYSDDMLASAINDLKSGQTLIEASTKNNVPRSTLYMRAKALGIHLTASRNEYPAECMRAAINAVIGGSSLQHASEMFNIPKTVLWRRIQKEGYQILRSEMKKSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEGLKKSRLEEAVAACRGGKMSQAAASMTYHIPKTTIWRRLQQDGKKSERSLTSRKQKVTDSKHNTQTKVEGSDFTYCEVSSEIPITYIDENSIPEDSVIILTAADMDGLNLEGRQIIVNSDSGQGYIPCAISIEENSNYSQTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118108;
- 90% Identity
- iTF_00676119;
- 80% Identity
- iTF_00676119;