Espl024973.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- -
- Assembly
- GCA_031772225.1
- Location
- CM062863.1:12554050-12557619[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.014 1.1 10.8 5.7 2 23 374 396 373 396 0.95 2 21 0.058 4.8 8.9 5.0 1 23 402 424 402 424 0.96 3 21 0.00038 0.032 15.7 1.1 1 23 430 452 430 452 0.97 4 21 0.036 3 9.5 0.5 1 23 458 480 458 480 0.98 5 21 0.0006 0.05 15.1 0.2 2 23 488 509 487 509 0.96 6 21 2.1e-05 0.0017 19.7 0.6 1 23 515 537 515 537 0.97 7 21 0.035 2.8 9.6 1.3 3 23 545 565 543 565 0.97 8 21 1.2e-05 0.00096 20.5 1.5 1 23 596 618 596 618 0.98 9 21 0.00082 0.068 14.7 1.4 1 23 626 648 626 648 0.97 10 21 0.00097 0.08 14.4 0.7 2 23 656 678 655 678 0.96 11 21 0.00012 0.0095 17.3 2.6 2 23 748 770 747 770 0.96 12 21 0.36 30 6.4 4.4 3 23 778 798 776 798 0.97 13 21 0.00038 0.032 15.7 1.1 1 23 804 826 804 826 0.97 14 21 0.0018 0.14 13.6 0.3 1 23 832 854 832 854 0.94 15 21 0.0027 0.23 13.0 0.3 2 23 862 883 861 883 0.96 16 21 3.9e-05 0.0032 18.8 0.6 1 23 889 911 889 911 0.97 17 21 0.22 18 7.0 1.0 1 23 917 939 917 939 0.97 18 21 4.2e-05 0.0035 18.7 5.3 1 23 975 997 975 997 0.98 19 21 0.0033 0.27 12.8 2.4 1 23 1008 1030 1008 1030 0.97 20 21 0.00037 0.031 15.7 1.9 1 23 1036 1058 1036 1058 0.97 21 21 3.3e-05 0.0027 19.1 0.7 1 23 1064 1086 1064 1086 0.97
Sequence Information
- Coding Sequence
- ATGGATCACCCAATCAACATGGAGCACATCTCCTACCTGCAGTCACATCTGGCTTGCAATGAAGATCCCCTGAACCTCAACACCAACTTCCAGCGTAATCTCTATCTCCAGCGAGGCCAGGAGTCCTACATCCCCCACAAGCCGCAGGAGAATTATATGACCCAGAAGGTCCAGGGCTCGTATATCGCACAGAAAGGCCAAGAGTCTTACATAGCCCAGAAAGGCCATGTCTCTTACATCGCCACTAAGGGCCAAGCGTACATCGCTCAGAAAAGCCAGGAATCCTATATCAACCAGAAAAATCAAGAGGCGGCGTATATCAATCAGAAAAGTCAGGAAGCTTACATCACGCAAAAAAGTCAAGAAGCCTACATTGTACCGAAATTACAAGAAACTTACCTAATACCTAAAGGGCAAGAAACATATTTGATTCCAAAGACCCAAGAATCTTATATTATTCCTAAACCACAAGAATACAATGTTACAAAAACCCAAGATTCATACATCAAAGATCAAGATATTTCATCTAGTACGAGGATCATTTCCACCTCGTACATTCTCCCCAAACAGCAAGAAGACTCTTATTTCCTGACCAAGCCGCAAGAAACCTACCAGCTGATTCCTAAAACACAAGAGTCGTATCTCAACACTAAAGAACAGGAGATTTATATTGTTCCCAAGTCGCAATCGTACATTATACCGAAAACACAAGAGACTTATATTCCACCTAAAAGTCAAGATGCATACATCATTCCCAAGTCGCAGTCTTACATCGTGCCCAAAGATCAAGATACATACATTATCCCCAAACCGCAGGATAGCTACATGAGCAAGGTTCAGGATGCGTACATACAGAAGGATCAGTCCACAGACATGATGCAGAAAGATATTGACGGTCTGTGTAATTATGAACGCCGTCAAGAAGATTACTATCTTATCCAAGTAACTGTCGCTGATCAGGAACAAGTGGAAAAGGTGATGGCCAAACAACCCGAGGAGCAGCAGATGAATATACAACTCCAAGTCCAGCACGGCAAGAAAGTCATGCAGAAGGATGATATTAATTTGGCACAGTTGACCGTGTGCGATAACGATAAGGTTACCCAGACTAAACCCATATCTTGTGACGAGTGTTCTTACAGCTGCCGATATCCAAGCTCCCTGAAGAAACACAAGAAGAATTGTCACACTAAAGGCAACATCTTCGCTTGTAAGGTTTGTAATTATACTTGCGGAAAAAAGAGAGATTTAAAACATCACGAGTTGTCTCACAGGAGGTGGCGTAGGTATGCCTGTGATCAGTGCGACTACAGATTCCAGTCTCAGAGCAAACTGGAGATTCACAAACTTAAACACACGCGAGCTAAACCCTTCACGTGCAGTGTATGCAGCTCGCCCTTTCAGAAGTTAGATGATCTCAAAATTCACAACCTCACTCACTCTCAAGGCAAGGAGGTGGTCACTTGCGAAGAGTGCGGTTATATCTGCGCTCAACCCTACGATCTGGAGAATCACAAGCTGTCTCATGAGCAGGAGAAGAAGTTCGCCTGCAATATCTGCGGTTTGAGATTTCGTTACCAAGTAACCCTGAATGGACATATGAAGAAGCATGAAGAGCGGAAGATATACGGCTGCAATCAGTGCAGCTACACCACTAGCAAAGTGTTCTATCTCAAAAACCATATGAAAGCTCATTTCCTGGGCAAGAAACCGGGAAGTCTGGTCAGACGTAAGAAAGTCTCCTCCTCAAAACACGCCACCAAGATCAAGTCGGCGGATAGGCCCTACGAATGTGATAAATGCGGCTTTGCCAGCAAACGGAAGTTTAATCTGCAGACTCACATGAAGATTCACGACCCGCCTACCGGAGAGACGTTCTTCTGTAATGAGTGTAATTACAGCTCTCCTAAGGAGAGAAACCTGAAGAAGCATCAATTGATTCataaagaacaaaataaacCTATTGTCTGTACCCTCTGTGGATATTCCTGTAAGACTCCCGCTGTTTTGAGAAAACACAAActcacaatacatgaaattgAAGAGGAGGAACCGGAGATCGTTGAGAGAGATTCGTCTGATGATCACTTTGGTGATAGGGATGGTGTTCGTCGCAAAGTATCCATTGGTATTCAAACGGATCCTGTCCCAGAGAGCTCAGATGATGATTCCAGCACTAAAGCAGATGAAGTGGAGGAAAAGCCGGTCAAGAAAACTAGAGCCCCAGGACCGCGGATAGTGACGTGCGACGAATGTAACTATTCTTGTAGATATCCCAGCACTCTTAAGCGCCACAAGCGAAGCGTCCACACGCAACAAAACATCTACGGCTGCAAGGTGTGCAGCTACACGTGTGGTAAGAAAAGAGATCTGAAACATCACGAATTGATGCATCGCAGGTTGAGACGGTACGCTTGTGACCAGTGTGACTATAGATTCCAGTCTCAGAGCAAATTGGAGATACACAAACTGAAGCATACTCAGGCTAAGCCTTTCACCTGCAATCTCTGCGGACTCAGCTTCCCCAAACTGGCAGAATTGAAGATGCACAATTTTGTCCACGCACAGGGTAAACAGATCATCTCTTGTGACGAGTGCGGATATATCTGCTCCCAGATATACGATCTGGAGAACCACAAGCTGGTGCATGCGCATGAAAAGAAGTTTGCCTGCCAGGAATGCGGCCTCCGCTTCAGTTATCAAGTCACGCTCAACGGACACATGAAAAAGCATGCCATGAAAAAATTGTACGCATGCAACCTTTGTAGCTTCGTTGGTACAAAGATGTTCTATCTGAAGAAACATGTTCAATCACATTATGAGGAGAAGAAGACGTCTTGTGACGAATGCGGATTCACACCGAAAAATCCGACCCCTACCGCTCTCAAGTTGCACATGCAGACACATTCATCACTCAAACCATTCTCTTGCACCATCTGCCCGTTTAACTGCAGAACCAAATCTAATCTCAGGACACATATGAAGAAGCATAGTCGCCCGCAACCGGAAAAAGCCAAATTATTTGCATGTTCTCAGTGCAAGTACACATCGACAAAATCAAAGAATTTCAAACTACACATGTTGATTCATAGAGAAGATGAGCCTTTTGCTTGCGACGAATGTGGATACACTTGTAAACTTCCAAGTTATTTGAAGTCGCATAAACTAACACACGCAGCCGTTAAGCCATTCCCATGTAACGAGTGCACCAAGAGTTATAGAACGGCATTCGATCTGAAGGTTCATAAAATGATTCATAGACCGGATCCGTTTGCCTGCGACGAATGTGACTTTAACACTAACTGTTTCACAAACTTATATAAGCATAAAAAGTCACACATAGCAGCTGCGAAAGCTCCCAAAACATTGATGGATCCCACGCAAATTGACAACACACATAATGATCATTTAGTGCAAGCCGATGACATGTTGCACGAACACATGCAGGCGGATCATATGCAAGACCACATGCAGACAGATCATATGCACAACGAGCATATGCAGGCGCATGACATGCACGGCAATCCTATACACTTGGAATCTCTCAGCAGCAGTCTGCTACACGGTTGA
- Protein Sequence
- MDHPINMEHISYLQSHLACNEDPLNLNTNFQRNLYLQRGQESYIPHKPQENYMTQKVQGSYIAQKGQESYIAQKGHVSYIATKGQAYIAQKSQESYINQKNQEAAYINQKSQEAYITQKSQEAYIVPKLQETYLIPKGQETYLIPKTQESYIIPKPQEYNVTKTQDSYIKDQDISSSTRIISTSYILPKQQEDSYFLTKPQETYQLIPKTQESYLNTKEQEIYIVPKSQSYIIPKTQETYIPPKSQDAYIIPKSQSYIVPKDQDTYIIPKPQDSYMSKVQDAYIQKDQSTDMMQKDIDGLCNYERRQEDYYLIQVTVADQEQVEKVMAKQPEEQQMNIQLQVQHGKKVMQKDDINLAQLTVCDNDKVTQTKPISCDECSYSCRYPSSLKKHKKNCHTKGNIFACKVCNYTCGKKRDLKHHELSHRRWRRYACDQCDYRFQSQSKLEIHKLKHTRAKPFTCSVCSSPFQKLDDLKIHNLTHSQGKEVVTCEECGYICAQPYDLENHKLSHEQEKKFACNICGLRFRYQVTLNGHMKKHEERKIYGCNQCSYTTSKVFYLKNHMKAHFLGKKPGSLVRRKKVSSSKHATKIKSADRPYECDKCGFASKRKFNLQTHMKIHDPPTGETFFCNECNYSSPKERNLKKHQLIHKEQNKPIVCTLCGYSCKTPAVLRKHKLTIHEIEEEEPEIVERDSSDDHFGDRDGVRRKVSIGIQTDPVPESSDDDSSTKADEVEEKPVKKTRAPGPRIVTCDECNYSCRYPSTLKRHKRSVHTQQNIYGCKVCSYTCGKKRDLKHHELMHRRLRRYACDQCDYRFQSQSKLEIHKLKHTQAKPFTCNLCGLSFPKLAELKMHNFVHAQGKQIISCDECGYICSQIYDLENHKLVHAHEKKFACQECGLRFSYQVTLNGHMKKHAMKKLYACNLCSFVGTKMFYLKKHVQSHYEEKKTSCDECGFTPKNPTPTALKLHMQTHSSLKPFSCTICPFNCRTKSNLRTHMKKHSRPQPEKAKLFACSQCKYTSTKSKNFKLHMLIHREDEPFACDECGYTCKLPSYLKSHKLTHAAVKPFPCNECTKSYRTAFDLKVHKMIHRPDPFACDECDFNTNCFTNLYKHKKSHIAAAKAPKTLMDPTQIDNTHNDHLVQADDMLHEHMQADHMQDHMQTDHMHNEHMQAHDMHGNPIHLESLSSSLLHG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898017;
- 90% Identity
- -
- 80% Identity
- -