Espl010306.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- lrrfip2
- Assembly
- GCA_031772225.1
- Location
- CM062850.1:29543688-29563367[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.1e-99 2.6e-94 316.9 14.9 1 300 123 463 123 463 0.94 2 3 0.011 4.1e+02 1.1 2.3 120 171 461 512 460 515 0.89 3 3 0.1 3.8e+03 -2.1 5.2 14 235 502 534 475 538 0.50
Sequence Information
- Coding Sequence
- ATGGGTGATCAAAATGAAACTTGTACGGCGGCCAAACAGACTAATGGAGATAGTGATAGTGGTCAAGATGTTAGTGAGAATGAAGCGTTTACCGATGGAGATTTTGATGACTCCGAAGAAGAAGACACCGTCTGCGTGAAGGTAAACGATTCGAAGAGTGTTCCTTGCAATGAAGCCATCAACCACCAGACGGGCGCCGGCCCACTCAACAACGGGATCCAACTCAGGGACAAGAGCAAGATGAGTCATCTCGCTGTGAAGCTGTCACCGACTCAGGAGAAGCACGACGGCTTTAACTATTGCGCGCTGAGCAATGGAAATGACGACCTGACCATAGTCGGAATCCTCGGGAAGGACCACGATAGAGCGGAAGCTCGTCTGGCGGCCCGGAGAGCAGCGAGAGCCGAGGCCCGAGAGATCCGCATGCGTGAGCTAGAGAGGCAGCAAAAAGAACAAGAAGAAAATGCTGACCGAGTATATGATATGTATTCAGACACAACAACCAGAGTGTCTCGGGTGGGTGTATCGCGAGTGGTCACCAGCGCTCCCTCTTCAGGCAACTACCATTCATCACGACGTAGCTCTGAGGACTCGCTTGAAGAGATGGGCAGCATCAGGGACATAAGGGTTGACGACTGGCGAACCAAGGTGCCATTGGAGGAATGGAGGGAAATCCTTGTGGTGGACAAGATCTACCCCAGACTGTGGGCCGTGGTGATGATGTTAACTGTCACGATAATAACTAATATTGTTTTGAGCAAGcaTGAGCTCAAAGAAGTGGAAGAGAAATTCCGGAAAGCAATGATTCTCAATGCTCAGTTGGACAATGACAAAGCGTCATTTTCATATCAGCTCGAACTGCTCAAAGATAAATTGGAAGATCTACAAGAACAGTACACACAGCTACAGCGTGAGCACAAGGACAAATGTCGTGCTTTCGACTCCCTGACACGTGAATGCCGTACCGCACGCGAAGAGCTAGATCGCTGCATGGCTGCCGTTTTGCTACGTGACCGCTGCATTCGGGAGGCAGGAATGGAACTAGTAGCTGTGGAAGGAGCCGAAGGGGAGTCCGGGGGTGCGGGAGCAGCCCTCGTGTCCAGTGCGGGCAGGCAGGCTCTTGAGCAGGCAGGGCAAGGCACACTAGatgtgCGATTGCAAACCCTCTGCTCGGAGAGACAAGCATTAGAGAATGAGGTCAAACAATTGAAGACACAGTTGGAAGAAGAAAGATCAAACAAAAAGTCTGTTGTCCACAACTCTTCTCATAATGGACCGGTTAATGGCTCTGATAGTGACTCTGATTCTTTTGATCACCAACGGGAAAATTCCAAGTTGGTTGCGGATTACAAATTCCGTGCATGCAAGGCGGAACAGGATGTGCTGACACTGCAGGCCACAGTAGCCCGGTTGGAGAGTCAGGTCCTGCGTTATCGGAGCGCCTCCGAGGAAGCTGAACGAATCGAAGATGAACTCAAGTGTGATCGCCGGAAACTACAGCGAGAGGCCCGTGAAGCGCAGAGCAGAGTTGAGGAACTAGAAACTGAAAATAGTCACTTGAATAAACGTCTAGACAAACTGAAGAATGCAAAGTCTGCCTTACTCAAGGAGCTCTGA
- Protein Sequence
- MGDQNETCTAAKQTNGDSDSGQDVSENEAFTDGDFDDSEEEDTVCVKVNDSKSVPCNEAINHQTGAGPLNNGIQLRDKSKMSHLAVKLSPTQEKHDGFNYCALSNGNDDLTIVGILGKDHDRAEARLAARRAARAEAREIRMRELERQQKEQEENADRVYDMYSDTTTRVSRVGVSRVVTSAPSSGNYHSSRRSSEDSLEEMGSIRDIRVDDWRTKVPLEEWREILVVDKIYPRLWAVVMMLTVTIITNIVLSKHELKEVEEKFRKAMILNAQLDNDKASFSYQLELLKDKLEDLQEQYTQLQREHKDKCRAFDSLTRECRTAREELDRCMAAVLLRDRCIREAGMELVAVEGAEGESGGAGAALVSSAGRQALEQAGQGTLDVRLQTLCSERQALENEVKQLKTQLEEERSNKKSVVHNSSHNGPVNGSDSDSDSFDHQRENSKLVADYKFRACKAEQDVLTLQATVARLESQVLRYRSASEEAERIEDELKCDRRKLQREAREAQSRVEELETENSHLNKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -