Basic Information

Gene Symbol
dl_1
Assembly
GCA_031772225.1
Location
CM062849.1:20490687-20508948[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1e-74 1.4e-70 237.7 0.0 1 169 89 259 89 259 0.99
2 3 1.1 1.3e+04 -3.1 0.1 122 147 490 516 435 525 0.55
3 3 0.34 4.2e+03 -1.4 0.2 20 57 688 725 686 737 0.80

Sequence Information

Coding Sequence
ATGGaCGGTGATCTGTCTAGTTGTGACGTAGATCATGAGGACAACTGTCGGCAATCAAATATCAATATCAGTGATGTCATTGAAGTTATTCAGACAACAGATCCAAGTTTCGAAGCGGCTGTACAGCAGTGTGAGCCGGAGATGTTCAGCGGTGGTGGTCCTCTCCCCGGGCTCTCTCAGAGCCCCCAGCACCCTCCGCAAGCCGCCCAGCCAGCTCTGCCCTTGCAGGCGGCGCCCTCACACCACAGGCGGAGGAATGCTTACGTCAAGATTGTAGAACAACCTGCCTCCAAAGCTCTTAGgttTCGGTATGAATGCGAAGGCAGATCAGCGGGGTCTATACCTGGAGTTCACAGCACaccagaaaataaaacatatccaACCATTGAAATAATGGGATACAGAGGTCGTGCCGTCGTCGTTGTCTCCTGCGTCACCAAGGATCCACCTTACAGGCCCCATCCCCACAATTTGGTAGGAAAAGACGGATGTAAGAAGGGTGTATGTACTGTAGAAATCAATTCTGACAGTATGTGCGTTTCATTTAGCAATTTAGGAATTCAATGTGTCAAGAAGAAAGATATTGAAGAAGCTCTCAGAGTTCGTGAAGAAATCCGAGTTGATCCCtataaaaCTGGATTTTCTCATCGTTCACAACCAACCAGCATAGATCTGAATGCAGTCCGCCTGTGCTTTCAAGTGTTTTTAGAGGGAGCCGAAAGGGGGAGGTTCACTCTTCCCCTAGCCCCTGTCGTGTCcgatacaatttttgataaaaaagcaATGAGTGATCTTGTTATATGTAAAATGAGTCATTGTTCAGCACCTGTGGCCGGTGGGCGGGAAATTATTCTACTCTGTGAaaaggtAGCCAAAGAAGACATAAGTATAAGATTTTATGAAGAAGTTGATGGACAGGTAGTGTGGGAAGGTTGGGGTGACTTCCAGCATGCTAATGTTCACAAACAAGTAGCAATCGCGTTTCGAGCACCACGCTACAAGACTTTGGATGTTGAACTACCTGTCAAGGTTTGTATTCAACTAAGAAGACCATCAGACGGAGCCATCAGTGAGCCTCTTCCCTTCGAATTACTCCCCTTGGATTCAGGTAGGACGGGTCTCTTGTCGAGACGCCGCAAGACCGATTTCAATCTTCTAAGCCAAATTTTGGCAACAGATTTTCAGCATAAACGCAAACAATCCCCACAAAACTCGTTTGATTCGGAAAACACTGTTACTACCGCTATATCAATTGATggaaataacaacaataatcaTCACAATCCTAACTTTGAATCTGTCGTCACATCGACGTCAGAAACTGatgcaaattctgaaaacaacTTGACAGTAGACCTCACTACTCCTTCTGATGAAGTCCATAAAATTGAGGATCAAATACATTCTCGGGAAAACGGCATCGATTTGAACCATTCAAATTCTTCAGACAATCATGATAAAAACTTAAATGAACTTTTAGACCAAGTGGCTGAACTAGACGAGATATATTCTGAAAATCAAACAAGATTATGCAACATGGCTTCAATTGAAAGCTACAATTCCCAACAAATGAGCATGGATATAGATGATTTTGATGATAGAAAAACTTACAGTAGCCTACAGTTAGCGTTCAAAAATCCTGTACCTATAACCGAAGTTGATATATCTTATGAGGATGTCATTACGCACAAAGGCCCAATTATTGATTTAGCTCCGCTTAAGCGAGACACTGAAGAAAAACTTCCTCCTTTGCCGCCTAAACGTATCCGTAAAACTCCTTCAGTCGAGGTCCTCCGTCCCCGAGCCCAAACCTTATCAATAGGTTCTGCCGAACAAATACCTAAACCGGGACAACAAACGCCTGTCTCTCAATCTCCCACACAGAGTCTCAATCGTCCCCAACATAATACCGTGACTAGGTCTGTTGATCGTTTACCTACAAACTTACCATCTGTTCCTCCTAAAAAGCGTTCCTTTCTTTCTCGCATTTTCAACAGGAAATCTAAAGATAGATCTCCACCTCGTCGAGCATCAGATGGGTTAAAGCCTCCTAAGCCAGTAGGTAGAAGTGCCAGTAGTGTATCTGGGCAGCGACCTTCCAAATACAAGCAAGATGTTTCACATACGTCCCTTAAGGGTTCATCTGGAAACTTATCTTTAGGAACTTCGTTGCGTTACACTGACAGTATCACTCATATTTCTTTGCACGGAGATAATAATGATTCTTCTGTTTCTCTTAATAACAGCAATCGTGCCCAGATGCCACCTACCGATGGTGATACAATTCTTGTCGCTGAGAATGTATTAGCTATCGATGCATCGgctcttaaaaaaatacaagataacCTTGACCTTACTGAAGCCGAACATTATGCCTTATACATGGCCCTGGCACCACACGCTACTGTGTCAGAATTTGATGAATTAAGTTGCTACTACTCTCCTGTCGAGGACCCAGTAGTGTTGAAACGAAAAAGACAGAAATTTGGTGGAGACCCAAATGCACACCTGCTTAGGCATTTGCAAGCCCCAATGCAAGATATTGCTAgCATGGATCCTTTAGCGCAGGCGCCACTCTACAATGTGTATGGAATGTCACCTGAGCAGACTATTAAAATGGAACCAAgagATCAGACTCCCTCACCCTACGCAGGACAGGCAGTTGCCCAATTTGGTGGGGTCTACCGCAGTATTCAAGGTAGTCCTTCTCCGCAGCACCAGGCCACCCCCTCCCCTCCTCTGGAATACGGAGCCGTGGGGGGCTGGGCACCCCCTCCATTGCTGCCTGCCCCTTCTGCCCCCCCACAGCTGCCCCCTGACCATGCCACCCTCAGTAGCCTACTGGACATGGACAGTCAGCAGCTCACTCAACTGAACTCCGCCGAGCTCTCGGGGCTGTCCTCCCTCCTCGAGGGAACCTATCAGCCCAATCCCTACCAGCCATCTTTGAGACAGGACAGCAGAATGAATGTGGAACAAGATAACATGACAGACAGTTTCACGAGACTGACAACAAATGCCATAAACGAACTCACCGGAGGCAACGGGCTAACGGACCACTACGGCAGGCCAAATTGA
Protein Sequence
MDGDLSSCDVDHEDNCRQSNINISDVIEVIQTTDPSFEAAVQQCEPEMFSGGGPLPGLSQSPQHPPQAAQPALPLQAAPSHHRRRNAYVKIVEQPASKALRFRYECEGRSAGSIPGVHSTPENKTYPTIEIMGYRGRAVVVVSCVTKDPPYRPHPHNLVGKDGCKKGVCTVEINSDSMCVSFSNLGIQCVKKKDIEEALRVREEIRVDPYKTGFSHRSQPTSIDLNAVRLCFQVFLEGAERGRFTLPLAPVVSDTIFDKKAMSDLVICKMSHCSAPVAGGREIILLCEKVAKEDISIRFYEEVDGQVVWEGWGDFQHANVHKQVAIAFRAPRYKTLDVELPVKVCIQLRRPSDGAISEPLPFELLPLDSGRTGLLSRRRKTDFNLLSQILATDFQHKRKQSPQNSFDSENTVTTAISIDGNNNNNHHNPNFESVVTSTSETDANSENNLTVDLTTPSDEVHKIEDQIHSRENGIDLNHSNSSDNHDKNLNELLDQVAELDEIYSENQTRLCNMASIESYNSQQMSMDIDDFDDRKTYSSLQLAFKNPVPITEVDISYEDVITHKGPIIDLAPLKRDTEEKLPPLPPKRIRKTPSVEVLRPRAQTLSIGSAEQIPKPGQQTPVSQSPTQSLNRPQHNTVTRSVDRLPTNLPSVPPKKRSFLSRIFNRKSKDRSPPRRASDGLKPPKPVGRSASSVSGQRPSKYKQDVSHTSLKGSSGNLSLGTSLRYTDSITHISLHGDNNDSSVSLNNSNRAQMPPTDGDTILVAENVLAIDASALKKIQDNLDLTEAEHYALYMALAPHATVSEFDELSCYYSPVEDPVVLKRKRQKFGGDPNAHLLRHLQAPMQDIASMDPLAQAPLYNVYGMSPEQTIKMEPRDQTPSPYAGQAVAQFGGVYRSIQGSPSPQHQATPSPPLEYGAVGGWAPPPLLPAPSAPPQLPPDHATLSSLLDMDSQQLTQLNSAELSGLSSLLEGTYQPNPYQPSLRQDSRMNVEQDNMTDSFTRLTTNAINELTGGNGLTDHYGRPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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