Esul017897.1
Basic Information
- Insect
- Esperia sulphurella
- Gene Symbol
- -
- Assembly
- GCA_947086405.1
- Location
- OX352261.1:2175107-2200534[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.036 2.7 9.1 2.2 3 23 37 57 35 57 0.96 2 22 0.0035 0.26 12.3 1.5 3 23 116 136 114 136 0.96 3 22 5.3e-05 0.0039 18.0 2.1 1 23 174 197 174 197 0.94 4 22 0.011 0.77 10.8 0.5 3 23 237 257 236 257 0.98 5 22 0.12 8.8 7.4 0.3 3 23 332 352 330 352 0.95 6 22 8.5 6.2e+02 1.6 3.0 1 19 360 378 360 382 0.89 7 22 0.16 12 7.0 0.3 3 23 425 445 424 445 0.95 8 22 0.29 21 6.3 0.3 3 23 502 522 500 522 0.96 9 22 4.2 3.1e+02 2.6 1.5 1 19 531 549 531 551 0.96 10 22 0.00077 0.056 14.3 1.4 3 23 562 583 560 583 0.96 11 22 0.16 12 7.0 0.3 3 23 631 651 630 651 0.95 12 22 0.00027 0.019 15.8 1.6 1 23 689 712 689 712 0.93 13 22 0.023 1.7 9.7 3.2 1 23 714 738 714 738 0.96 14 22 0.09 6.6 7.8 1.2 1 23 774 795 774 795 0.97 15 22 1.4e-05 0.001 19.8 0.5 1 23 883 905 883 906 0.94 16 22 0.004 0.3 12.1 0.2 1 23 935 958 935 958 0.95 17 22 0.0033 0.24 12.4 0.9 3 23 965 987 963 987 0.89 18 22 1.1 78 4.5 1.5 3 23 995 1015 995 1015 0.96 19 22 0.032 2.3 9.3 0.4 1 23 1020 1042 1020 1042 0.97 20 22 0.0057 0.42 11.6 1.0 1 23 1048 1070 1048 1070 0.97 21 22 1.3e-05 0.00094 19.9 1.4 1 23 1076 1098 1076 1098 0.98 22 22 0.26 19 6.4 5.0 1 23 1104 1127 1104 1127 0.98
Sequence Information
- Coding Sequence
- ATGGCTTCATCCAAACACTTTGACAATGCACAAACCAGCGACCCTGGCGCGCCCGGGCCGCGCCAAAACCGCAAACCCACTACTATAGACTTGATTGGAGGCATATTCTGTAACATCTGTGAACACACATATAGTAACAAGACAAAATACGATGCACATTATAAATTACACAAAACTGGGAGTTCAGAGATAGAATATGCATGTGTAGTTTGTCACCTGGTGGTGGTGCACTACCGCAACTTCTTAGTGCATTGCTACCGCCGGCATGTACACAAAGATAAATTCAGTTCCACCTCACACCGACCTACGAAACCCACAATTATCGACTTAATCGGTGGCATAATATGCCACATCTGTAAACTGACGTTCGGCAACAAGAAGGAGTACGACAAACACTACGCGACACATAACACCGGGAGAGCAGAGATCGAGTACGAATGTATTGTTTGTCACAAAGTGTTAGCAGGATTCATCAGCTTTCGGAATCATTGCTCAGATCGTCATGTGCAAAGAGACAAATTCAAATGCAAATACTGTGATAAAACATTTGTCAAACAGTTTTTCCTGTACAAACATATTATAGCTGTGCATGTGCCCAAATACAACAAAGACAATGGCATGAAACGGCAACCTCATACATTCTTGGATCATGCAGAAGAAAGCAGTTCTGGTAAACCATCAACAATCGACTTAGTCGGGGGCATTTTGTGTAACATCTGTGAAACAACGTTCAACAACAAGAAGGGGTACGACGAACACTACGCAACACACAACACCGGGAACGCAGAGATAGAGTACGAGTGTGTTGTGTGTCACACTGTGCTCGCGGGGTACATCAGCTTTTGGAATCATTGCTACGAGCAACATGTGCGAAAAGAGAAAATCAGGCCACAGCACACATACTTAGACGAAACAGAAGAGAATGACTTGGGCGCGACCAAACCCGCCTCAAACCTGAAACTCACTACCATCGACTTGATCGGAGGAATATTCTGTCGCATCTGTGAAATGACGTTCGGTAACAAGAAGGAGTACGATGAACATTACGCATCACATAAAGCTTGGAGCGACGTGGAGTACGCTTGTGTACTCTGTCACAAGGTCATACCAGACTACCGCAGCTTTAGACAGCACTGCGACCGCCATTTACAGAAAGACAAATTCAGGCGACCTCTTACACACCTGGACCAGGCAGAAACTAACGACTCTGGCGCGCCCGTGCCGCAGAAAACCCGTAAACCCACCACCATCGACTTGGTCGGAGGCATATTGTGTCTCATCTGTCAACTGACGTTCGGCAACAAGAAGGAGTACGACAAACACTACGCGGCGCATAACACCGGCAGCGCTGAGATAGAGTACGCGTGTATCATTTGCCACAAAGTCATAGTCGACTACCGCACCTTTCGCGGCCACTGCTACGATAGACACTTGAAAAAAGACAAGTTAAGCTCTCAACGACCCAAAGTCAAGCACACTATAGACCTAATTGGAGGCATATTCTGTAAAGTCTGTCAACTGACGCTCAGCAACAAGATGGAGTACGATGAACACTACGCAACACATGGCACCGGGAGCGCTGAGATCAAGTACGCGTGTGTGGTCTGTCACAAGGCAGTAGCTGGATACACTAGCTTCAGACGTCACTGCTACGATCAGCATTTACAAATAGCCAAATTCGGATGCAAGTACTGTGACAAAACGTTCATGAAACAGATGTACCTCGACAAGCATATCATACGTAGGCATGCGTTCAATAGCCCTGAAGGGAACTGCTTAGATACACCACCTCATACACACCTGGACCAGGCAGAAACCAACGACTCTGGCGCGCCCGTGCCGCAGAAAACCCGTAAACCCACCACCATCGACTTGGTCGGAGGCATATTGTGTCTCATCTGTCAACTGACGTTCGGCAACAAGAAGGAGTACGACAAACACTACGCGGCGCATAACACCGGCAGCGCTGAGATAGAGTACGCGTGTGTTGTTTGTCACAAACCGTTAGCAGGCTATAACAGTTTCCGTACACATTGCTACGATCAGCATGTGCAGAAAGACAAGTTTAAATGCAATCACTGTGACAAAACGTTCATCAAGCAGAGCATTCTCAACGAGCACATCACCGCCATGCACATTTACAAATGCACTAAGGACAACTGCACAAAACAATTTACAACCGAGAAGGATCTCCATGTACACGAATTCATTCACAAGAAAGAGCGGAACAAGCCTCCCTACGAGTGCCAGACGTGCTACGAGCAGATAGACAGCATCGACGCGTGCGAGGAGCACATCGACCAACACTGCTCCTTCAGCTACTCCTGCCCCATCTGCAACGAACACACAACCAAAACTAACGCCACCAGCCATCTGATAAAACACTTTGGTGACGTAGTCAACGACGTCGACAGCGATGACTGCGAGCTTCCCGAAATATCTGAGGACAGCTCCATAAACGTCATCGGGGGAATCTTCTGCTGCTACTGCGAGAATATTTACAAGAACAGGTTGGAGTACGATGTCCATTTCGCAGCAGAGCACGAGGATAAGGCTAAAGTGTATTGCTGCATCATCTGTAAGAAGCAAATCGAGACGTATTCCAAGTTCGGCTGCCACTGTTACGACCACATCTCCAAGGCCAGGTTTGAATGCGACGAGTGCGACAAGTCGTTCCCGCGGCTGTCGCTGCTGGTGCAGCACACTGAGGCGCACCACGCGGGCGGCGCGGCGGGCGGCGGCGGGGGCGGCGCGGGGGCCGGCGGGGGCGGCGCGGGGGCCGGCGGGGGCGGGGGGCGCGCGTTCCGCTGCGCGCAGTGCCCGCGCGCGTACAGCTCCAGCAAGCGGCTGGTGGCGCACGCGCGCGCGCAGCACGAGATGCTGCGCCACGCGTGCGCCGAGCCCGGCTGCCACACCACATTCGAAACGCCGAAAGACCTGATCCTCCACCAGAAGCAGCATAAGTCGACCCTCGACACGTGGTGCCGCCAGTGCGGTCTGCAGTTCACCAGCCTCGCCTCCTGCGAGAAGCACCTCGACGTCCACAAGGAGAAGCTGTTCTCCTGCCCCGTCTGCAGCCGGCAGTATGGCGAGAAGTACCTCATGATGAATCACATCTCCCAGCATTTCGAATCAGTCCTACACATGTGTAAAGTCTGCGGGAAGATATACGACGCCAAGCGGCGCCTGATCGAGCACGTGAAGACACATTCCAGCGCCAAAACTTACGAGTGCGAGTACTGTGGCAAAGGTTTCGTGAAGACCAACCACCTGCAGCAACACCTCAGCATCCACACCGGCATGAAGCCGTTCAAATGCCTCGCCTGCCCGAAGACCTTCGGCTCGTACCCCAACTGCCACAAACACATGCGCAAAATGCACAACATCGACACCAAAATGCTTAAAAAATCCGCTAACACCAGCCCAGTGAGCAACGAGAACTCGCCGTTTATGATGATCCAGCCCGACTCTGTCGCGTCCGAGGGTCTGTTGATGGAGCAAGACTGCGACGCGGCGGACACAGACGACAGTACGATGGACTCCGGGAGCATCGACAACATCGTGATAGAGAAGGAGTCGCCCATCTTCGACACCGACATGAATCCGGTCGACATGGCCGCCGTGCTGGCCGAGCTGCCGGATAATATCGTTGCATTTGTAACTGAAGCCCAAGAAGCGATGTCCGAAGCCCCCCCGCCGCCGCCGCCGCCCGCCGCGCAGGCCGTGCCGGCCGCTCGGCCCGAGCCCGGCCCCGAGTTCAGCGACGACGAGGACCTGGACCTGGGCATCGGCGAGCTGATCGACCTCGACGACCACCTCATCCCCGACATCGACCCCCGCCTCATCACCTCCCCCGCGTACGCCCAGCACCTGCACAGCTACAACTATCACTACGAAAACTACGACCAGAGCATCATCGAGAGGAGCAAGTGGGAGCCGCCGGTCATAACCAAGTTCTACGACAACTTCTACGGGGAGATCCCCGACATGGGCGCGAGCCGGCTGCCCGTGATGAATACGAACATATTTTGA
- Protein Sequence
- MASSKHFDNAQTSDPGAPGPRQNRKPTTIDLIGGIFCNICEHTYSNKTKYDAHYKLHKTGSSEIEYACVVCHLVVVHYRNFLVHCYRRHVHKDKFSSTSHRPTKPTIIDLIGGIICHICKLTFGNKKEYDKHYATHNTGRAEIEYECIVCHKVLAGFISFRNHCSDRHVQRDKFKCKYCDKTFVKQFFLYKHIIAVHVPKYNKDNGMKRQPHTFLDHAEESSSGKPSTIDLVGGILCNICETTFNNKKGYDEHYATHNTGNAEIEYECVVCHTVLAGYISFWNHCYEQHVRKEKIRPQHTYLDETEENDLGATKPASNLKLTTIDLIGGIFCRICEMTFGNKKEYDEHYASHKAWSDVEYACVLCHKVIPDYRSFRQHCDRHLQKDKFRRPLTHLDQAETNDSGAPVPQKTRKPTTIDLVGGILCLICQLTFGNKKEYDKHYAAHNTGSAEIEYACIICHKVIVDYRTFRGHCYDRHLKKDKLSSQRPKVKHTIDLIGGIFCKVCQLTLSNKMEYDEHYATHGTGSAEIKYACVVCHKAVAGYTSFRRHCYDQHLQIAKFGCKYCDKTFMKQMYLDKHIIRRHAFNSPEGNCLDTPPHTHLDQAETNDSGAPVPQKTRKPTTIDLVGGILCLICQLTFGNKKEYDKHYAAHNTGSAEIEYACVVCHKPLAGYNSFRTHCYDQHVQKDKFKCNHCDKTFIKQSILNEHITAMHIYKCTKDNCTKQFTTEKDLHVHEFIHKKERNKPPYECQTCYEQIDSIDACEEHIDQHCSFSYSCPICNEHTTKTNATSHLIKHFGDVVNDVDSDDCELPEISEDSSINVIGGIFCCYCENIYKNRLEYDVHFAAEHEDKAKVYCCIICKKQIETYSKFGCHCYDHISKARFECDECDKSFPRLSLLVQHTEAHHAGGAAGGGGGGAGAGGGGAGAGGGGGRAFRCAQCPRAYSSSKRLVAHARAQHEMLRHACAEPGCHTTFETPKDLILHQKQHKSTLDTWCRQCGLQFTSLASCEKHLDVHKEKLFSCPVCSRQYGEKYLMMNHISQHFESVLHMCKVCGKIYDAKRRLIEHVKTHSSAKTYECEYCGKGFVKTNHLQQHLSIHTGMKPFKCLACPKTFGSYPNCHKHMRKMHNIDTKMLKKSANTSPVSNENSPFMMIQPDSVASEGLLMEQDCDAADTDDSTMDSGSIDNIVIEKESPIFDTDMNPVDMAAVLAELPDNIVAFVTEAQEAMSEAPPPPPPPAAQAVPAARPEPGPEFSDDEDLDLGIGELIDLDDHLIPDIDPRLITSPAYAQHLHSYNYHYENYDQSIIERSKWEPPVITKFYDNFYGEIPDMGASRLPVMNTNIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00994684;
- 90% Identity
- -
- 80% Identity
- -