Esul012761.1
Basic Information
- Insect
- Esperia sulphurella
- Gene Symbol
- -
- Assembly
- GCA_947086405.1
- Location
- OX352285.1:354046-355698[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.5e-05 0.0011 19.8 0.6 2 23 82 104 81 104 0.94 2 15 0.00023 0.017 16.0 1.3 2 23 112 134 111 134 0.96 3 15 0.0058 0.43 11.6 0.5 3 23 142 163 140 163 0.92 4 15 2.8e-08 2e-06 28.3 1.1 2 23 171 193 170 193 0.96 5 15 0.00035 0.026 15.4 1.9 2 23 201 223 200 223 0.95 6 15 0.00034 0.025 15.5 2.1 1 23 230 253 230 253 0.97 7 15 6.5e-05 0.0047 17.7 1.2 2 23 259 281 258 281 0.95 8 15 0.00013 0.0093 16.8 1.8 2 23 297 319 296 319 0.94 9 15 0.0089 0.65 11.0 8.9 3 23 328 349 327 349 0.96 10 15 1.9e-06 0.00014 22.6 2.6 3 23 356 377 355 377 0.97 11 15 0.0017 0.13 13.2 3.9 2 23 385 407 384 407 0.96 12 15 8.9e-05 0.0065 17.3 2.9 1 23 413 435 413 435 0.97 13 15 0.00056 0.041 14.8 5.8 1 23 441 464 441 464 0.97 14 15 0.35 26 6.0 0.7 3 23 474 495 473 495 0.91 15 15 0.0051 0.38 11.8 0.4 2 21 509 528 508 529 0.94
Sequence Information
- Coding Sequence
- ATGGAGGAAACCCAGCCAGAAATGCCAGAAATCGAGCTGGTCTGCATCAAACCAGACATACCTCCGATAAAAGTCGAAGTTACCGTCGAAGTTGTCCCGGATCCAGAAACCCAAGCCATTAAAGAAGAATACAATGATGTTTCTCTGGAAGACTCGTACAGAAGCTACCTAGAGGCAAGTGCAATGGAAAGAAGTCGAGAAATAAATGGGAAAGTGTACCAGAATGGACGAATTAATAGAATCGAATGCCCTCAGTGCGACAGTACGTTTAAAAACCGCGCGAATCTGAAGCAGCATCTTAAATTTGTTCATTCTACAGAGGAGGATATTGTTGAGTGTAATCAATGCTATCGTACATTCAAGTCTGTTGGTCATCTTCGTTCTCACGTCAACTCCGTGCATGCTGCAGAGAATGAAGTCATTTGTGAAATTTGCCAGAAAAGTTTCCTAAACAAGAAACGTCTTAATAATCATATTTTCTACGCCCACCCAAAGCCAGGGGGAACTGTTAGCTGCAATATCTGCAATAAAAGCTTCAAGCAACAGTACAATTTAAAAATTCACATGCGGCAAGTACACCCGTCAGTGGAAAGCTCTGTGCAATGTGTCCAGTGCCACAAAAGTTTCAAGAACGATATGCTTTTACAAAGACACGTTAAATGGAATCATCCTGCCGATGGTATGGTGTATAAATGTCAGGACTGCGGAAGAACTCTCCCATCACTCGGTTGCTATAAGAAGCACCTGAAAAATGTCCACTCCAGTTCGAGCGTAACATGTCAGATATGCTCGAAAGAGTTCAAAACATTAAAAACTCTGCAGCGGCACGAAAAAAACATACACGGAGATGTTAAACCTGAGCCGAAGCAGTATAAAACTGGAGAGCTGAAGTGCTCAGACTGTGATAAGCATTTCGCTACGAACACAGCCTTGTTCTGGCACTTTGAGCGAAATCATTCTGAGAACAAACGCAGCAACCATTGTGAGACGTGCCACAAGGAGTTTTCGGATCACGCGTGCTTGAAACGGCATCTGGAGACCTCGCATTCGTCTGAAACGCCAGCTTGCCACATATGCCACAAGATTTTCAAGTCGCCTATGAATTTACAAAGACACATTAACGTCACCCACGCGCCTCCAGAAGCGTCACAGGTCTGTGACTTATGTAATAAAACCTTCAAATGCTCAATGCATTTACGAATACACATAAACACAGTGCATCCTAAAGAAGGTTCATTCTTCTGTGATATTTGTAAAAAAGAATTTGCTTCGAAGAAGTATATGGTTAAACATAGAAAAACTCATGTGGGCACAAAGGAGTTCCCTTGCCATTTCTGTCACAAACTCTTCAAGTCACAAAATGATGTGAAAAAGCACATAAAAAGAGTACATAATATTCTTTTGTACAACTCTAACAAGTGTATAGTTTGTAGCATGGAATTCTCCAGTGCATTTACGTTGGACGAGCATAGAAAGAAGTACCATAGTACAGAATCAGATTCAAGTACAAGTACTAAGTTGAAAACTTGTGTCAAATGCGGTACAAACTTCTCGACTGACGAAGATCTGCATTCCCATATATTGCAGTGTGGGAACGAGATTGTTCATGAAATTAAAATTGAAGTTGAAGAAACTTCAAGTGAGGAGTATTAA
- Protein Sequence
- MEETQPEMPEIELVCIKPDIPPIKVEVTVEVVPDPETQAIKEEYNDVSLEDSYRSYLEASAMERSREINGKVYQNGRINRIECPQCDSTFKNRANLKQHLKFVHSTEEDIVECNQCYRTFKSVGHLRSHVNSVHAAENEVICEICQKSFLNKKRLNNHIFYAHPKPGGTVSCNICNKSFKQQYNLKIHMRQVHPSVESSVQCVQCHKSFKNDMLLQRHVKWNHPADGMVYKCQDCGRTLPSLGCYKKHLKNVHSSSSVTCQICSKEFKTLKTLQRHEKNIHGDVKPEPKQYKTGELKCSDCDKHFATNTALFWHFERNHSENKRSNHCETCHKEFSDHACLKRHLETSHSSETPACHICHKIFKSPMNLQRHINVTHAPPEASQVCDLCNKTFKCSMHLRIHINTVHPKEGSFFCDICKKEFASKKYMVKHRKTHVGTKEFPCHFCHKLFKSQNDVKKHIKRVHNILLYNSNKCIVCSMEFSSAFTLDEHRKKYHSTESDSSTSTKLKTCVKCGTNFSTDEDLHSHILQCGNEIVHEIKIEVEETSSEEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00994543;
- 90% Identity
- -
- 80% Identity
- -