Etag007989.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- -
- Assembly
- GCA_905147235.1
- Location
- LR990098.1:1253124-1256909[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 9.7 5.8e+02 1.3 0.1 1 23 67 89 67 89 0.88 2 25 1.6 96 3.8 0.1 3 23 115 136 114 136 0.92 3 25 1.2 69 4.2 2.9 1 23 158 180 158 180 0.97 4 25 0.0043 0.26 11.9 7.8 1 21 184 204 184 206 0.95 5 25 0.0012 0.072 13.6 0.6 1 23 211 234 211 234 0.94 6 25 0.0033 0.2 12.2 1.4 1 23 240 263 240 263 0.95 7 25 0.0018 0.11 13.1 0.1 1 23 320 342 320 342 0.98 8 25 0.12 7.1 7.3 0.2 2 23 366 388 365 388 0.92 9 25 0.0054 0.32 11.6 3.2 2 23 411 432 410 432 0.97 10 25 0.012 0.71 10.5 3.8 3 23 438 458 437 458 0.97 11 25 0.035 2.1 9.0 1.9 1 23 464 487 464 487 0.89 12 25 0.00014 0.0082 16.6 1.5 1 23 493 516 493 516 0.96 13 25 0.1 6.2 7.5 2.7 1 23 522 545 522 545 0.96 14 25 3.1e-05 0.0018 18.6 0.3 1 23 551 573 551 573 0.95 15 25 4.1e-06 0.00024 21.4 0.6 1 23 579 601 579 601 0.99 16 25 1.2 72 4.2 0.5 1 17 607 623 607 623 0.91 17 25 0.12 7.2 7.3 1.0 2 23 739 760 738 760 0.96 18 25 0.15 9 7.0 6.7 1 23 782 804 782 804 0.95 19 25 0.0002 0.012 16.1 1.2 1 23 808 830 808 830 0.98 20 25 0.001 0.061 13.9 0.1 1 23 835 858 835 858 0.96 21 25 0.0036 0.21 12.1 0.7 1 23 864 887 864 887 0.95 22 25 0.023 1.4 9.6 1.1 1 23 894 917 894 917 0.97 23 25 0.00045 0.027 15.0 2.8 1 23 923 945 923 945 0.96 24 25 4.8e-05 0.0028 18.0 0.9 1 23 951 973 951 973 0.99 25 25 0.00076 0.045 14.2 1.5 1 23 979 1001 979 1002 0.93
Sequence Information
- Coding Sequence
- ATGTCGCAGGAACCAAAATGTGTGAAGACGGCTGACAATTCTGTTTTATTTTTAGGACGCGTGGCCGCCAAAACACCAGATCCGAATACGATACAAATTAAATGGAAAAAGAAACGCAGAGTGATGGGTGAGAAGGCGAACGCAGCGTTCATTCTGGAACATTCCAACGCGGTGCCGTTCAGATGGATGCGCGGGAAATTCATGTGCGCGTACTGCCCACAGATACAGCCAAACGTTAGCGAAATACGCAACCATACGTTGTTGCACAACAGAATGGAGATATTCGAAAAACCAGAGGTCCGCAACTCGTTTCCCTTAAAAGTCGATATCACGGATCTTTTGTGCTCCATTTGCGAAGGAGGGGTCGAGAATCTGGTACAACTAAAGAAGCATTTGGAGGAGAAACATTCAAAGATCTCAGATCGCGAATACGGCGACGGAATCGTGCCTTTCGTTCTGACGGGGAAGACGTTCAGATGCGTCCACTGCAGCGCTCACTACGAAGGTTTCATGACCTTGTTTATCCACATGAACGAGCATTTCCAGAGTTTCGTCTGCCACACTTGCGGGAAGAGCTACTCGGGGAAGCACAAGTTGAGGTCGCACCAGAAATGCCACGAAGTCGGAGAGTACCAGTGTACGAAATGCGAGATGGTCTTCAAGAATCGAGTGTTGAAGAACCGGCATTTGGCGCTGGTCCACGGACCGAAGAAGAGATATCGTTGTCCCATCTGTGATTTGACGTTTGATTCTTGTCATGGAAGGCTTAAGCATCTAGCGGTGGTGCATGGGCAGAAGTCGGAGTACCGATGTAGTCTGTGCCCTTCGGTCTTCGGGAGCGGATGCGGTCAGAACCCTAAATGGAAACGGAGACGCAAGTATAACGATCAGAGAGACAATGCGGCCGTGATCCTAGAGTTCTCGAACGCACTGCCCTTTAGGTGGAAACGGGGGACGTTCACCTGCGCCTACTGTCCGCAGTCCTTTGGAGACTTTGCCGGTCTTCAAGACCATGCAACGACCCACCCGAATAAAATAGAAGCTATGAAACTCGCCAGGACCTGTGATAACATCAAAGTCGAAATCACAGACCTCCGATGCGAGATTTGCCACCAAACAATGAAAGGGCTCGACGATCTGAAGGACCATCTGATAGCCGAACACGCGAAACCGATAATCAAAGACCAAGAGATCGGCGTGACGCCTTTCTACTTGAGTAACAAGGAAATGAAGTGCACGCACTGCGACGAGAAGTTTGAACTGTTCACGAAACTAAACACGCACATGAACGAGCACTATCCCAATAATATTTGCTGTCATTGCGGGAAAGCGTTCGTTGCGGCGCATAGGTTGAAGTCCCATCAGTTAATACACGAATTGGTCGAGAACCATAAATGCACTAAATGCGACCAGGTCTTCCAAACTCGAGCGCTTAGGAACAACCACTTCGTCATGGCCCACGGACCAGAGTACAGATATAGATGTCCGTACTGCAACGAATCGTTCAAAAGCTACTCCGATAGGGGACGGCATTTGAAGGAGACGCACGGAAAGAAAATAGAGTACCCCTGTCACTTGTGTTCGGCCGTTTTCGCGATGTGCAATCAGAGAACTAAGCATATCAAGCAAGTCCACATTAAACACAAGACGTTCCTCTGTGAATACTGTCCGTATAAGTTCGTGACAGCCGCTCAGTTGAGGAGTCACATGGTCAAGCATGTGGGGGAAAGGAAATTTCAATGTGAGATCTGCAAAAAGGCTTACGCCAGAATCAAAACGCTGAAAGAACATATGCGTATACATAATAATGATAAGAGATTCGTTTGCGAGATTTGTAACAATGCATATGTGCAAAAGTGTAGTCTCCAAGGAAGAAAAGCCGAAGTACAAATAAACGACACGGAGTTTGAGGATGATAAGTTGGCGGCGCTTGTAGCCGCGGCGGATCTGAAACTAGCAAAGAAAGAAGAGGTCAGACAGAGGACGAGCGAGGGGAACGAAAGGAGAGCTGTGTTCAGGAAAAACATAAAAGTTATCATGAGTAGCTGTACAGCTTATCCCTTCAAATACAGAAAAGGCGCGTACCTCTGTTTCTTCTGCAAGAGCACGTTTCTGGAGCCGGACAAAATGCGCGAACACACGCAGCAACAGCACGCAGACGCGCCCTTCAAGCCGCGAAAATACGAGCCTCTGAAAATGGATTTCGCTATGACCTCCTGCAAACTGTGCGGCTTCCAAATAGACAACTACAACACGCTGAAAACGCACCTAAAAGAACACGGGAAGGCTATCGACTACTCTCACGGGGAAGCAATATTGCCGTACAACTTGAGCAGAGACCTACACTGCTGTCAGATATGCGGCAAACGCTACGAGATGTTCCTGAGTCTCCACAAGCACATGAATGATCACTTCGAGCACTACATCTGCGAAACGTGCGGCAAACGCTTCGTCACGCTGCAACGCATGCTGAACCACACGCGGACGCACGAACGCGGCGACTTCCCCTGCAAACACTGTGGGGAAACGTTACCGTCGTACGCTGCGTTGTACGCTCACATCGCGAAGGTGCACCGCTCGAATAAGCGATACAAATGTCCGATTTGCGACGAAAAGTTCGTCACCTATAAGATAAGGATGAAGCATTTGAATACGGTGCACGGGGAGAAAACGGCAACGTTTCCCTGTCCATCCTGTCCGAAGATCTTCGATCTGTGCAGCCGACGCACCGCGCACATTCGCTCCCGACACCTCCAAGAGAGGAACCACAGCTGCAAGGAGTGCGGGATGAAGTTCTTCACCAACTACGAACTACAAGAGCACACGGTGAAGCATGTCGGTGCGAGGATCTACCAGTGTGATGTGTGCAAGAAATCGTACGCGCGCTTGAAAACGATTCGCGAGCACATGAAGATACACAACAACGACAGGCGGTTCGCGTGCGCGGCGTGCGGGCAGGCGTTCGTTCAGAAGTGCAGTCTGAAGCAGCACGCGCGGGTGCACCACTCCATGCAACTGAAACCAGATAACTTGTAG
- Protein Sequence
- MSQEPKCVKTADNSVLFLGRVAAKTPDPNTIQIKWKKKRRVMGEKANAAFILEHSNAVPFRWMRGKFMCAYCPQIQPNVSEIRNHTLLHNRMEIFEKPEVRNSFPLKVDITDLLCSICEGGVENLVQLKKHLEEKHSKISDREYGDGIVPFVLTGKTFRCVHCSAHYEGFMTLFIHMNEHFQSFVCHTCGKSYSGKHKLRSHQKCHEVGEYQCTKCEMVFKNRVLKNRHLALVHGPKKRYRCPICDLTFDSCHGRLKHLAVVHGQKSEYRCSLCPSVFGSGCGQNPKWKRRRKYNDQRDNAAVILEFSNALPFRWKRGTFTCAYCPQSFGDFAGLQDHATTHPNKIEAMKLARTCDNIKVEITDLRCEICHQTMKGLDDLKDHLIAEHAKPIIKDQEIGVTPFYLSNKEMKCTHCDEKFELFTKLNTHMNEHYPNNICCHCGKAFVAAHRLKSHQLIHELVENHKCTKCDQVFQTRALRNNHFVMAHGPEYRYRCPYCNESFKSYSDRGRHLKETHGKKIEYPCHLCSAVFAMCNQRTKHIKQVHIKHKTFLCEYCPYKFVTAAQLRSHMVKHVGERKFQCEICKKAYARIKTLKEHMRIHNNDKRFVCEICNNAYVQKCSLQGRKAEVQINDTEFEDDKLAALVAAADLKLAKKEEVRQRTSEGNERRAVFRKNIKVIMSSCTAYPFKYRKGAYLCFFCKSTFLEPDKMREHTQQQHADAPFKPRKYEPLKMDFAMTSCKLCGFQIDNYNTLKTHLKEHGKAIDYSHGEAILPYNLSRDLHCCQICGKRYEMFLSLHKHMNDHFEHYICETCGKRFVTLQRMLNHTRTHERGDFPCKHCGETLPSYAALYAHIAKVHRSNKRYKCPICDEKFVTYKIRMKHLNTVHGEKTATFPCPSCPKIFDLCSRRTAHIRSRHLQERNHSCKECGMKFFTNYELQEHTVKHVGARIYQCDVCKKSYARLKTIREHMKIHNNDRRFACAACGQAFVQKCSLKQHARVHHSMQLKPDNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971541;
- 90% Identity
- -
- 80% Identity
- -