Eten000820.1
Basic Information
- Insect
- Eristalis tenax
- Gene Symbol
- -
- Assembly
- GCA_905231855.1
- Location
- HG993128.1:4132957-4136191[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 4.3e-05 0.0066 17.4 1.1 2 23 396 417 395 417 0.97 2 16 1.9e-05 0.0029 18.5 1.4 1 23 423 445 423 445 0.98 3 16 0.66 1e+02 4.3 0.1 1 17 451 467 451 468 0.93 4 16 2.7e-05 0.0042 18.0 3.5 1 23 509 531 509 531 0.98 5 16 0.0005 0.077 14.1 0.5 1 19 565 583 565 587 0.93 6 16 3.3e-05 0.005 17.8 1.9 1 23 593 615 593 615 0.98 7 16 6.5e-06 0.00099 20.0 0.9 2 23 727 748 726 748 0.97 8 16 1.4e-06 0.00021 22.1 1.6 1 23 754 776 754 776 0.98 9 16 1.7e-05 0.0027 18.7 0.8 1 23 782 805 782 805 0.98 10 16 0.00014 0.022 15.8 1.2 1 23 816 838 816 838 0.98 11 16 0.00017 0.026 15.6 0.6 1 23 850 872 850 872 0.98 12 16 0.013 1.9 9.6 1.8 1 23 878 900 878 900 0.97 13 16 8.6e-06 0.0013 19.6 0.2 2 23 906 928 905 928 0.96 14 16 0.091 14 7.0 3.0 1 23 936 959 936 959 0.94 15 16 0.025 3.8 8.7 0.2 2 23 968 990 968 990 0.91 16 16 0.00013 0.02 15.9 1.3 2 23 996 1017 995 1017 0.97
Sequence Information
- Coding Sequence
- ATGTCCGTCAAGGTTGACGACTCGGTGTGCCGAGTGTGTTTGAGTTCATCGGGTAACATATCAATCTTCGATGGATGCGGGAAAGATGATCAGTTTCGATATTGCACTTCATTGGAAGCCACAATAGACGATGGACTGCCGTCAAAGTTGTGTAAGAAGTGCAATGATCACCTTAAAGTCGCCTACGACTTTCGCTTTCAAGCTGTTTATGCGGAAAATTATTTCAGAAAGACAATATTTTTACCTTCACTGAAGAAAGAGGATGACGCGGGGACGACAATTGTCAAAGATGGGCAGAATTGTATCGATGAACTTGACGAGAAAATGGCTGAAATTAACATGCTATTGGCCGTACATACAGAAGTCCCAGGCGAGCCTTGTGACGGCGATCACGATGACATGAATAATACGGGGTTTTACGACGACGAGAGTGTTGACGAAAATGAGCGACAAGTGGAAATCATCGGCATGGAGACATTTGAAAAAGAACAGAGGGCGAAGAGGGATGTACATGTGAAGTTGGAAATGGCTAGTGTTCCCGCCCCACTGGTATCGTCTACAGCAAGTAATACGGGATATGCTCCACCGATTCCTTTACCAATGGATTCTCCACAGTCGACAAATAGTGGCTGTAGCAAGCAGCCCTCTAACGTGGGTTTGAACGGGATACAGCAGTATGCAACATCGAGCCCTTACTCAGAGCATTCTGTGCAGGATTTACGACCCGAGCAGGAATGTGGCAGTTCGATGCAGCTGGAAATAATGCCAGTTCTTAAGAATGACCCATCCACCTACGACTACAACGCGTCCACAGGTGTAGCAGGAAGCTTCGACACGTACAATGCCCCTCCGCAGATGCAATATCAACAGAGCTTGACAATGCACTTGCAATTCGACGTGCCCTCAACAGTCCAACATTCAACGATACCAGTGCAGGAGACCGCTCCGACCACCAACAACTATGACTATAGTTATCAACCTCAGTTCCCGGCATATTCTGCGCAAACGGCTGATATCAGACCTGAACCGACGCTGCCAGTGGTGCCCCAAGAATCAACAACACAGACGGCACCAGTCCCACTGACTGATGTCCAAGCCGATGGCGTGTCTAAGACCGAAAGCCGTGAGAATCAGACCAATAAAACGAAAAAATTGAAACGAGAAACTTACCGAAGGGATAAGATCGAGTGCAATATTTGTGGGAGTGTATTCACGCATCTAAACTCGCTGAAAACCCATCTCCTCAAACACTCCGGTGAGAAGCCGTTCAAGTGTGAGTTCTGTAACAAAGCCTTCGCTAGGAAGACAGTTCTCAACATCCATCGACGATTGCATACCGGAGAGAAGCCGTACAAGTGTACGCTTTGCACAAGTGCCTATGTAACAAAGGAAGCCTTAACGGTAGGTCTGCTTCAACTGAACTCCGACGACTCATTCATCATGTTTCTTATTACGTTTCAGCGTCATTTGCAAAAGGACCACGAACAGGAAGTGGGTGCGAATTTCCGAAAGGATAAGGTGTCGTACATCTGTTCCATATGCAACAAGTCCCGCTGTTCGAAGTATTCCCTCGCATCACACATGAAGACACACTCCAACGATGCAAAAGCCCGCCGAAGGATCGTGAGAAAGAGGAAGGAGAGGTCTGATAATTCGAGTGGGCCAGTAACCGCAACTAATGTTCCTCTAAAGTACTCGTGCAAGATTTGCCAGAAGGGCTTCCCCAACAAATGGGAGCTGAGCACTCACGATGAATCGCACGATCAGAATAAAACTTTCGAATGTGACATCTGTCAGAGGACGTTTGAAAAGAAATTCCAGTTGCTGTACCACTTGCAGACGCATGACGGCGGTGAGGAGTTGATAAAAGCCAAGGTTCAAACAAGCGGCGACAAATCCGCCCAAAAGAATGCCGATGGAGTGTTGGAAAAGGAGTCCAAGACTACAAGCGGAAAGAAAGTAAAACGAAAGTTGCCGGCTAGAAAACGGCGGAAAAGAAAAGCAAAGGTAGAGTCAGACGCGGACAGCAATGAGGAACAGGACGAAGCCGAAGTCGGTGAGGATGACGATGAAAACGATAAAGACTACGAAAGCGAGGCCCCTGAGAAGAGTACAACGAAGAGGGTCACCAGGGCACAAAGGGAAAACCTGAAGGTACTGCGGGCCAGTAACAAAATTGTGTGCCACATTTGTGAAGCGGTGTTTACGCATCCCACATCGTTAAAAACGCATATGCTGGTGCACTCGGGGGAACGTCCATTCAAGTGCGATTACTGTGATAAGTCATTTGCGAGAAAGACCGTCCTCAACATCCATCGGAGACTACACACGGGCGAGAAACCATACAAGTGTCCGCTATGCGATAATGCCTGCGTCACCAAAGACGCACTTATGCGCCACATGTCGAAAGATCATGACGACGACAAGGAAACTGATCGAATAAAATTCACTTGCGGAATATGCCATAAGGCGATGGGTACCAAGTATTCACTGCAGGCTCACATGAAGCTCCACGAGCAATATTCCTCAGCGGACGCAGAGGTAAAGTTTTCGTGCAATACGTGCACGGAATCGTTTGATTTGGAATCTGAGTATACAAAGCACATGGAGGTGCACGATTCACATCGGAATTTCCAGTGCGACATCTGCCAGGCGACGTTCGAAAAGAAGTTCAAGTTACTCTTCCACTTGCAGACACATAAAATCGAGGATCTTCCGTGCAAAAAGTGCGGTGAAACGTTCACAATCAGGGAAAACCTAATCCAACACATAAAAGTGCAGCACATGGATCCTCAAAATATGGATTTCCAATGTCCACACTGCAACATCAGACAGTACGACACCCGTGATCTCAAGCTGCACATGCTACACGTTCATGAAGTCGACATGGGGGGTCTGAACTCATGCGAACTATGCGGAGATACATACTCCACGGCCGCGGAATACTACAAGCACATGTACGACAAGCATGACACAATCAGCAAAACTTGCAACGAGTGCGACAAGTACTTCGACTCGAGGAAAGCCTTCGATAAACACATATTAACACACTACATGTGA
- Protein Sequence
- MSVKVDDSVCRVCLSSSGNISIFDGCGKDDQFRYCTSLEATIDDGLPSKLCKKCNDHLKVAYDFRFQAVYAENYFRKTIFLPSLKKEDDAGTTIVKDGQNCIDELDEKMAEINMLLAVHTEVPGEPCDGDHDDMNNTGFYDDESVDENERQVEIIGMETFEKEQRAKRDVHVKLEMASVPAPLVSSTASNTGYAPPIPLPMDSPQSTNSGCSKQPSNVGLNGIQQYATSSPYSEHSVQDLRPEQECGSSMQLEIMPVLKNDPSTYDYNASTGVAGSFDTYNAPPQMQYQQSLTMHLQFDVPSTVQHSTIPVQETAPTTNNYDYSYQPQFPAYSAQTADIRPEPTLPVVPQESTTQTAPVPLTDVQADGVSKTESRENQTNKTKKLKRETYRRDKIECNICGSVFTHLNSLKTHLLKHSGEKPFKCEFCNKAFARKTVLNIHRRLHTGEKPYKCTLCTSAYVTKEALTVGLLQLNSDDSFIMFLITFQRHLQKDHEQEVGANFRKDKVSYICSICNKSRCSKYSLASHMKTHSNDAKARRRIVRKRKERSDNSSGPVTATNVPLKYSCKICQKGFPNKWELSTHDESHDQNKTFECDICQRTFEKKFQLLYHLQTHDGGEELIKAKVQTSGDKSAQKNADGVLEKESKTTSGKKVKRKLPARKRRKRKAKVESDADSNEEQDEAEVGEDDDENDKDYESEAPEKSTTKRVTRAQRENLKVLRASNKIVCHICEAVFTHPTSLKTHMLVHSGERPFKCDYCDKSFARKTVLNIHRRLHTGEKPYKCPLCDNACVTKDALMRHMSKDHDDDKETDRIKFTCGICHKAMGTKYSLQAHMKLHEQYSSADAEVKFSCNTCTESFDLESEYTKHMEVHDSHRNFQCDICQATFEKKFKLLFHLQTHKIEDLPCKKCGETFTIRENLIQHIKVQHMDPQNMDFQCPHCNIRQYDTRDLKLHMLHVHEVDMGGLNSCELCGDTYSTAAEYYKHMYDKHDTISKTCNECDKYFDSRKAFDKHILTHYM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00672342;
- 90% Identity
- -
- 80% Identity
- -