Eten003045.1
Basic Information
- Insect
- Eristalis tenax
- Gene Symbol
- -
- Assembly
- GCA_905231855.1
- Location
- HG993128.1:41687566-41688558[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.5e-13 1.1e-09 38.5 0.1 4 38 102 137 99 143 0.89 2 3 0.0036 11 6.4 0.1 15 37 161 182 155 189 0.84 3 3 9.7e-10 2.9e-06 27.4 0.0 6 38 214 246 210 251 0.85
Sequence Information
- Coding Sequence
- ATGCCGGTGGTGACGCCTGTTGAGTCAGCACTGGTCACAGCATCGACGACTGAGCAATTCGTCATTTTCGAACTGAAGACTGACACAGAACCCATGTACAATTATGTCATAAAGCACGTAAAGAAACCGCCGCCGGAGGACGAGGACGCATTGCAGACAATATCCTCTGTGAGCAGTGAACCTCCCCCCGTCGAGGAGACAGTTGACAACGGCCCTCTGGTAGTTGGCGAGCCATGTGATGCTGAGAATCAAGAGGACACTAAAGAGAATTCGCCAAAAACCCAGCGAGCACTTAACCGAAAGCGGCTGGCCGAAGCTCTGGAGGCAGTGGTCAGCAGGCAGCTGACCATCAGCAAAGCGGCCAGTGTCTACCAAGTGACCAAGAGCACCCTCTGGAAGGAGGTGAACAAATGCACAAGCCACCGCAGGAAGATCGTGGATAAAGAGTTGAACCGCAAGATCGCAAAGCGAATCTGCTCCGGCGAGTCCTTGTCGAAGATTTCGAGAACGCTCAACATTGCCAAGTCCACACTGCACCAGCATAAGGTTCGACTGGCCCACAGCGGCCAACTGCCGGCGAATGTAACGCTCAAGCCACCCGTCGATCCTGCAGAGAGACTTGCCGTCAAGGAGCGTGTCATCGAAGCATTCCGCGGCTGTCGCGTGAACGGCATGTCGATACGCCTAGCGGCGAAGTTCTTTTCCATACCGCCCACAACGCTGTGGAGACACATTAAGCAGTACAAAGCCTTGCACCAAACCGCGTTGCTCACCGAAGTAACCGTTCAAAATTCGCCAGACGCGGACGAAGAGACTGACGCTGAAGACCAGTCGATGGACGGACAATCCGAATCCAGTGACGAGGATGAGACGAGTTCACAGAGATCCGGTGCGAGGACCGAGGGCGGCGATAACAGCGAAGTTGACGATTTCTTGATAAGCTTTGACTTCGATACTTTTGAGCAATATGTGAAGAAGGAGCTAGAGAGGTAG
- Protein Sequence
- MPVVTPVESALVTASTTEQFVIFELKTDTEPMYNYVIKHVKKPPPEDEDALQTISSVSSEPPPVEETVDNGPLVVGEPCDAENQEDTKENSPKTQRALNRKRLAEALEAVVSRQLTISKAASVYQVTKSTLWKEVNKCTSHRRKIVDKELNRKIAKRICSGESLSKISRTLNIAKSTLHQHKVRLAHSGQLPANVTLKPPVDPAERLAVKERVIEAFRGCRVNGMSIRLAAKFFSIPPTTLWRHIKQYKALHQTALLTEVTVQNSPDADEETDAEDQSMDGQSESSDEDETSSQRSGARTEGGDNSEVDDFLISFDFDTFEQYVKKELER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00672148;
- 90% Identity
- -
- 80% Identity
- -