Basic Information

Insect: Eristalis pertinax
Gene Symbol: -
Assembly: GCA_907269125.1
Location: OU026146.1:40591362-40607757[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.3e-05 0.0027 17.9 2.1 1 23 410 432 410 432 0.96

2 18 8.6e-06 0.00069 19.8 0.4 1 23 438 460 438 460 0.97

3 18 0.00042 0.034 14.4 0.5 1 23 466 488 466 488 0.96

4 18 1.4e-05 0.0011 19.1 3.1 1 23 494 516 494 516 0.97

5 18 3.2e-05 0.0026 18.0 4.7 1 23 522 544 522 544 0.99

6 18 7.1e-05 0.0057 16.9 6.1 1 23 550 572 550 572 0.97

7 18 1.6e-07 1.3e-05 25.2 4.3 1 23 578 600 578 600 0.98

8 18 1e-07 8.2e-06 25.8 2.4 1 23 606 628 606 628 0.97

9 18 0.00014 0.011 16.0 5.7 1 23 634 656 634 656 0.97

10 18 1.7e-05 0.0014 18.8 6.5 1 23 662 684 662 684 0.98

11 18 2.9e-06 0.00023 21.2 4.5 1 23 690 712 690 712 0.98

12 18 6.7e-06 0.00054 20.1 8.1 1 23 718 740 718 740 0.98

13 18 1.6e-06 0.00013 22.0 7.9 1 23 746 768 746 768 0.98

14 18 6.1e-07 4.9e-05 23.4 7.7 1 23 774 796 774 796 0.98

15 18 0.00019 0.015 15.5 9.5 1 23 802 825 802 825 0.95

16 18 0.00016 0.013 15.8 0.5 1 23 831 853 831 853 0.97

17 18 0.00072 0.058 13.7 4.4 1 23 863 885 863 885 0.98

18 18 6e-06 0.00048 20.3 1.7 1 23 891 914 891 914 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.3e-05	0.0027	17.9	2.1	1	23	410	432	410	432	0.96
2	18	8.6e-06	0.00069	19.8	0.4	1	23	438	460	438	460	0.97
3	18	0.00042	0.034	14.4	0.5	1	23	466	488	466	488	0.96
4	18	1.4e-05	0.0011	19.1	3.1	1	23	494	516	494	516	0.97
5	18	3.2e-05	0.0026	18.0	4.7	1	23	522	544	522	544	0.99
6	18	7.1e-05	0.0057	16.9	6.1	1	23	550	572	550	572	0.97
7	18	1.6e-07	1.3e-05	25.2	4.3	1	23	578	600	578	600	0.98
8	18	1e-07	8.2e-06	25.8	2.4	1	23	606	628	606	628	0.97
9	18	0.00014	0.011	16.0	5.7	1	23	634	656	634	656	0.97
10	18	1.7e-05	0.0014	18.8	6.5	1	23	662	684	662	684	0.98
11	18	2.9e-06	0.00023	21.2	4.5	1	23	690	712	690	712	0.98
12	18	6.7e-06	0.00054	20.1	8.1	1	23	718	740	718	740	0.98
13	18	1.6e-06	0.00013	22.0	7.9	1	23	746	768	746	768	0.98
14	18	6.1e-07	4.9e-05	23.4	7.7	1	23	774	796	774	796	0.98
15	18	0.00019	0.015	15.5	9.5	1	23	802	825	802	825	0.95
16	18	0.00016	0.013	15.8	0.5	1	23	831	853	831	853	0.97
17	18	0.00072	0.058	13.7	4.4	1	23	863	885	863	885	0.98
18	18	6e-06	0.00048	20.3	1.7	1	23	891	914	891	914	0.96

Sequence Information

Coding Sequence: ATGAATTCGGATCATTCATCGGCTCCTGGCGAGTCGTCATCAAATCCGAATGACTCTCAACAAAGTCGGCATTCACCGCAGCAggcccagcaacaacaacagcagcagcaccatcaacatcaacaacagcagcaacagcaacaactcgCTCACCAGCGACATCCGCAACAATTGAACGAACTTGGAAAGTACTGGGTTGTTACCAATCTATTTCAGGGTCCAGGTCAGCCGCCATATAATATTGGTGTAACGCCAACAACCTCAGCAGTTCCTACACTACCGCCTCCAATACCATCGCATTCGAGTTCGTCAGCGAAATCAGGAAATTCTAAACAAGATCAACTATCGTCAAACTCGCACACACAATCACCGGCACATATTGTCTCATCAGTTGGTGCAACCTCATTGCAAATACCCAATCCAATGTTAACAAACTCATCGATGAATCAACAGCAGCTTCCGAATGGCACAATTATTGCAGCTCCCCGTCATCCGGACTCACTGCACGTCCATGGAACGATGTCCTCCGACGATAATCGACACGTCTCACACGGTATGCAAGACATAAAGGAGGAGAAACCTTTCGCGAATGGCAAACAGAATAATCACATGGCTCATGTAAATCCAGCATCTTCCGTTTCATCGAAAATGAATTCTGGCAGTGGTGGCAACAATGCGCAATCTGGCGAATCGAGTGGCGGTGGCGGACAAATGGTTAAACTGCAAGGTGGCGGTGGTCCCGGCGGTTCCGGTGGCggcactggtggtggtggtaatgAACAACAAGAAATGGTCAGTGGTAAGCAGCCGCATGGCGTTGAAATGTACAAAGTAAATATTGAAGATTTGAGTCAATTTCTATCATATCACGAGGTCTTCGGTAAGATTCATGGTGAAGTTATAAATCAACAACAGATATCATCGCACACGGTAACGCATCCTACTACGAATGTATCAACCTCAAATGCTGGTGGCAATACCTCTGTGAGTGGTACTGTTACTGGTTCACTacctccaccaccgccaccgtcgaCAAATGGCAATTCGATTGTGTCAACCAACAGCCTTACCAGTTCGGGTTCGGGTGCTCAAACTGCACCGCCACCAGGTGGTGGCCCTTCGGCATCCGGTGATCTGATACtgcccaaaatggaaaatcaagGAATGGGTGTAGATCAAAATACACCATTATTAGCACCAGATGGAACACCCATAATGGGCGGCACGCATATCTGTGACATATGCGGCAAAATGTTCCAATTTCGCTATCAACTAATTGTACATCGTCGCTATCATAGCGAGCGTAAGCCATTCAATTGCCAAGTATGCGGACAGGGATTTACAACGTCGCAAGATCTCACCCGTCATGGTAAGATTCATATTGGCGGGCCAATGTTTACGTGTATCATTTGCTTCAATGTATTTGCCAATAACGCCAGCCTGGAGAGGCATATGAAACGTCATTCGACGGATAAGCCATTCGCGTGCACCATATGCCAGAAGACATTTGCCCGCAAAGAGCATTTGGACAACCACTTTCGCAGTCATACGGGCGAGACGCCATTCCGTTGCCAGTATTGTGCGAAAACATTTACGCGAAAGGAACACATGGTGAATCATGTGCGCAAGCATACCGGGGAGACGCCGCATCGTTGCGATATTTGTAAGAAATCTTTTACGCGGAAAGAGCACTATCTAAACCATTACATGTGGCATACAGGTCAGACACCGCATCAGTGCGATATATGTGGGAAGAAGTACACCAGGAAGGAACATCTAGCCAATCATATGCGATCCCATACGAACGATACACCATTCCGGTGTGAGATATGCGGCAAGAGTTTTAGCAGAAAGGAACACTTCACCAATCATATTCTATGGCACACagGAGAAACCCCTCATCGCTGTGATTTCTGTGCGAAGACGTTCACCAGGAAGGAGCACCTATTGAACCATGTCCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAGACCCCCTTCAAGTGCACCTACTGTACCAAGGCGTTTACACGGAAAGATCATATGGTGAACCATATCCGTCAGCATACTGGAGAATCACCGCATAAATGCACCTACTGCACGAAAACGTTCACAAGGAAAGAGCATCTGACCAATCATGTGCGCCAACATACGGGTGAGTCGCCTCATCGTTGCACCTACTGCAAAAAAACATTTACACGCAAGGAACACCTAACAAATCACATCCGGTTGCATACAGGCGATTCGCCCCACAAATGCGAATACTGCCAAAAGACGTTCACCCGTAAGGAGCACTTGAACAACCACATGCGACAGCATTCAAGCGACAACCCACATTGCTGTAATGTTTGCAACAAACCGTTCACCCGTAAGGAGCATTTGATCAATCATATGTCACGTTGTCATACCGGAGATCGGCCCTTCGCATGCGAAACATGCGGCAAAAGTTTTCCGCTTAAAGGCAATTTGCTCTTCCATCAGCGCAGTCACACCAAGGGTCAAGAGTGTGAACGTCCATTTTCTTGTGAGAAATGCCCGAAGAACTTCATATGCAAAGGTCATTTGGTGTCACATATGCGTTCGCATTCGGGTGAGAAACCACATGCGTGCACTATGTGTAGTAAGGCATTTGTCGAGAGAGGGAATCTCAAGCGTCACATGAAAATGAATCATCCCGACGCTGTTATGCCTCCGCCTCCGACACCGATACCGGGCATACTGACGCAAATCAAACAGGAGGTCAATCCGATAATAATTCCTCATCAACCACCAACGATGCACACAATACAGCAAATCACTTCAACTGCAGGCAGCTCAAGTGCAAATAATCCCGTTAATCCAGCATTATTGGCGCCCGGCCTTGTACCAATGGTAACATCTACAATTACTTCACATATAAGTCAAAAGCAGCAAtcccatcaacagcagcagcagcaacagcatcaacatcaacagcaattgcaacagcaacagcaattgTTGCAGCTATCCATTCAGCAAGCAGCTCAACATCAACAGGCTGCCGAACatcggcaacagcaacagcagcagcaacagcagcagcatcagcaacagcaacaaagtcatcagcagcaccagcagcagcagcaagctcAGCAGCAATCACAACAGTCACATCAACAGCCACAACCGCCATCAGTGCCGATCGCTCTAATTGGAGCCGATCCCTCAGCGATAGCACGCGCCGCTATGCAACTGCAACATTTGCCAACAAACGTCGAACAACATCCGGTGgtttattaa
Protein Sequence: MNSDHSSAPGESSSNPNDSQQSRHSPQQAQQQQQQQHHQHQQQQQQQQLAHQRHPQQLNELGKYWVVTNLFQGPGQPPYNIGVTPTTSAVPTLPPPIPSHSSSSAKSGNSKQDQLSSNSHTQSPAHIVSSVGATSLQIPNPMLTNSSMNQQQLPNGTIIAAPRHPDSLHVHGTMSSDDNRHVSHGMQDIKEEKPFANGKQNNHMAHVNPASSVSSKMNSGSGGNNAQSGESSGGGGQMVKLQGGGGPGGSGGGTGGGGNEQQEMVSGKQPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISSHTVTHPTTNVSTSNAGGNTSVSGTVTGSLPPPPPPSTNGNSIVSTNSLTSSGSGAQTAPPPGGGPSASGDLILPKMENQGMGVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYLNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPIPGILTQIKQEVNPIIIPHQPPTMHTIQQITSTAGSSSANNPVNPALLAPGLVPMVTSTITSHISQKQQSHQQQQQQQHQHQQQLQQQQQLLQLSIQQAAQHQQAAEHRQQQQQQQQQQHQQQQQSHQQHQQQQQAQQQSQQSHQQPQPPSVPIALIGADPSAIARAAMQLQHLPTNVEQHPVVY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00991990;
80% Identity: -