Eper010138.1
Basic Information
- Insect
- Eristalis pertinax
- Gene Symbol
- -
- Assembly
- GCA_907269125.1
- Location
- OU026148.1:39115080-39141585[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.7e-11 5.8e-08 32.1 0.0 1 38 501 539 501 544 0.89 2 4 3.1e-13 4.9e-10 38.8 0.1 2 39 556 593 555 596 0.94 3 4 3.5e-18 5.6e-15 54.6 0.0 1 45 610 655 610 655 0.98 4 4 8.2e-20 1.3e-16 59.8 0.0 1 44 662 706 662 707 0.96
Sequence Information
- Coding Sequence
- ATGCTGGCACTACTTTTGCTGACTGTGGCAATGGGATGGTGGAGAAGCGGTCTACTGCGGACAGCTGAGCAATTGAAAATCAAAGGGCTCTGCGAGACAGCCGAAAGTGTTGACGATATCTCAGAGACAGCAACAATCACTGTATCGGAGAATATAACACAAGCAGTTGTTGGGAATATCGTTGGGAATCCAAGCCAGGTAGTTGCACCAACAGCAACGTCTACACCGCTACTAAGAAAATCTCGGGTCAGAAAACGCTCGAAATCACcagagcaacagcagcaacagcaccaacaacagcaacagcagcagcaccaacagcagcaacatcaacatcaacagcagcaacagcagcagcaacaacaacagcatcaacatcatcagcaacaacagcagcagcagcaacaacaaggaaTATTAAATCAAAATCTAAACACAGCAATAGTAAGCCTGCAACAGACATCGTCTGGCAACTACATACCCGTTTCTGGTGGTCAAACGATAACAACGACAGCAGTTAGTCAACAGAATTCAGAGGATTCGGATACGGATAATAAGCCGATTGCACAGAAAATCTGCAAAACTGAAGCGGGCACTTCACCGACATCGAATAATGGCAGTGTAACTGTCGCCCAGGGAACAGCTATTGTGACACAAATTGTAGTAGCACGCGACGTAAAAGATAAAAACATGACCAGCTTAGGAATGGGAATGaacgGCGGACTCCTCGGAGTGCCGATGGGCTTTTTAGATTTTGCCCCCGAACCACCAGCACCATCAGCAACGCCTGTAACAGTCACGGAACACGTTGACTTGTCCTGCAATCCCAGTACGGATACCAGAGACCTATCAAACTCAACACCAAATGGTGGTGAAGTTCGTATTAAATTCGAGACTCTTCGTTCTTTAGATCCCACCGAAGCGCTCGATATTGACAATCATTTAGCACAACACATGATCCAGCGGCTTGATCAATCGCCAATGCATACGATCCACCATCAGTCATCTACCGGCGATGAGAGTAACTCAAATTTAATTCAACACATCAAAAGCGAAGTAATTGAggtgaaacaacaacagcagcagcatcatcatcagcagcagcagcaacagcagcaaatgCATGCGCAAGCACTATCACAGCAAGGACAAtctcaacagcaacagcatcagcagcaacagcagcagcaacaacagcagcaacagcatcaacaacagcaacagcaacaacaacagcatcagcagcaacatcaagATATTTCCGGAGCAACTGTTATGGAAATTGATCCAAGTAATATTAAACATGAACCTGGAATGATTATCACACCGGAAATTGTCACCATGATGGCAACGGGCCATATGGATATATACTCAGATGCCAGCGAGGATTCGTTGATGATTGCGAATGGTTCCCCAAATGACAATAATGAGCCACACTATACGAATTTGGACCAACCACATGATAGTAAACAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAACATGAGTTTGACGAAAGCTTCTGTGACGTATGGTATCCCATCGACAACATTATGGCAACGTGCCCATCGTATGGGCATTGAAACACCCAAAAAGGAGGGCGGTACCAAATCATGGAATGAAGATTCATTAAATAGTGCACTTGAGGCATTACGAACTGGTCAGATATCAGCAAATAAAGCCTCCAAAGCATTCGGTATTCCGTCCTCAACATTGTATAAAATTGCAAGACGCGAAGGTATACGATTGGCAGCACCATTTAATGCGGCGCCTACAACATGGACGCCAGAAGATTTAGAACGTGCACTTGAGGCAATTCGTGCTGGTCATACGTCCGTCCAAAAGGCCAGTTCTGAATTTGGCATACCGACAGGTACACTTTATGGTCGCTGTAAACGTGAGGGCATTGAGTTGTCGCGTTCGAATCCAACACCATGGTCCGAAGATGCTATGAATGAAGCATTGAACTCTGTAAGagTTGGACAAATGTCTATTAACCAAGCGGCTATACATTACAACCTTCCCTACAGTTCGTTATATGGTCGTTTTAAACGCGGCAAATACGATATATCGAATGCGAGCGCATCGTCAATCAATAATACATCCGGAAATACAAGCGGTAGCATTGAAATAATCGAACACAGTCCAGAGAATTCGCAACAGTTCCAATACAGTCCAGCGCCGCAGTCTAATCATCaaactcagcaacaacaacagcaacaacagcagcagcaacaacaacagcaacaacagcagcaacaacatcagcaacatcaacagcagcaaccacaGCAACACATCCATCAACATGTTGTGCACattcaacaacagcaaccaccacatcatcatcaacagcaacatATCCAACAACAAGATGTTGTTACCTCAACAAGTCAGGTTCATGCCCAAGCTGGACAAATCCAACCGATCTATCATCAGCACAGCACCCCCGAGAGGAGTTGA
- Protein Sequence
- MLALLLLTVAMGWWRSGLLRTAEQLKIKGLCETAESVDDISETATITVSENITQAVVGNIVGNPSQVVAPTATSTPLLRKSRVRKRSKSPEQQQQQHQQQQQQQHQQQQHQHQQQQQQQQQQQHQHHQQQQQQQQQQGILNQNLNTAIVSLQQTSSGNYIPVSGGQTITTTAVSQQNSEDSDTDNKPIAQKICKTEAGTSPTSNNGSVTVAQGTAIVTQIVVARDVKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNSTPNGGEVRIKFETLRSLDPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKQQQQQHHHQQQQQQQQMHAQALSQQGQSQQQQHQQQQQQQQQQQQHQQQQQQQQQHQQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPHDSKQGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDISNASASSINNTSGNTSGSIEIIEHSPENSQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQHQQHQQQQPQQHIHQHVVHIQQQQPPHHHQQQHIQQQDVVTSTSQVHAQAGQIQPIYHQHSTPERS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314183;
- 90% Identity
- -
- 80% Identity
- -