Basic Information

Insect: Eristalinus sepulchralis
Gene Symbol: -
Assembly: GCA_944738805.1
Location: CALYJE010000061.1:3563517-3565010[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.093 10 6.9 0.2 2 23 85 106 84 106 0.94

2 13 0.00062 0.067 13.8 0.4 1 23 160 183 160 183 0.98

3 13 0.0003 0.033 14.7 5.1 2 23 192 213 192 213 0.97

4 13 2.2e-06 0.00023 21.5 1.9 1 23 219 241 219 241 0.99

5 13 8.4e-07 9.1e-05 22.8 0.6 1 23 247 269 247 269 0.98

6 13 6.7e-05 0.0073 16.8 4.7 2 23 275 296 274 296 0.96

7 13 0.0011 0.12 13.0 5.4 1 23 302 324 302 324 0.99

8 13 8.5e-07 9.3e-05 22.8 1.4 1 23 330 352 330 352 0.99

9 13 1.4e-05 0.0016 18.9 2.6 1 23 358 380 358 380 0.99

10 13 5.8e-05 0.0063 17.0 1.1 1 23 386 408 386 408 0.98

11 13 6.8e-06 0.00074 19.9 0.2 1 23 414 436 414 436 0.98

12 13 2.6e-05 0.0028 18.1 1.0 1 23 442 464 442 464 0.98

13 13 4.9e-06 0.00054 20.4 0.3 1 23 470 493 470 493 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.093	10	6.9	0.2	2	23	85	106	84	106	0.94
2	13	0.00062	0.067	13.8	0.4	1	23	160	183	160	183	0.98
3	13	0.0003	0.033	14.7	5.1	2	23	192	213	192	213	0.97
4	13	2.2e-06	0.00023	21.5	1.9	1	23	219	241	219	241	0.99
5	13	8.4e-07	9.1e-05	22.8	0.6	1	23	247	269	247	269	0.98
6	13	6.7e-05	0.0073	16.8	4.7	2	23	275	296	274	296	0.96
7	13	0.0011	0.12	13.0	5.4	1	23	302	324	302	324	0.99
8	13	8.5e-07	9.3e-05	22.8	1.4	1	23	330	352	330	352	0.99
9	13	1.4e-05	0.0016	18.9	2.6	1	23	358	380	358	380	0.99
10	13	5.8e-05	0.0063	17.0	1.1	1	23	386	408	386	408	0.98
11	13	6.8e-06	0.00074	19.9	0.2	1	23	414	436	414	436	0.98
12	13	2.6e-05	0.0028	18.1	1.0	1	23	442	464	442	464	0.98
13	13	4.9e-06	0.00054	20.4	0.3	1	23	470	493	470	493	0.96

Sequence Information

Coding Sequence: ATGGCTGGTCAGATGACACAAATGGAATTCTCAGATATGGTCAAGGACGGTACTTGTACTTTTTCAGATTGGCCAGATGAAGAGGAGGAAGACGATGAGCAATATACTGGCATACTCTTGACAGAGGATATGATCAAACAGGAGCCAGAGTTTATAATTGGATCGGATGATGCCGAAGAAGAGCAAAAAATCCGTGCCTTCCTTAATAAAGACACTATCGACGATGAGGAAAGGCAACAGTTGAACTGGCTGACATGTATGATTTGTGACGAACGCTTTTTGTCCACCAAAGAATTGTCGCTGCATGTACAAGAGCACACCAAAACTGCACTTAAGCAAGAGAACGATGAAATGTTGGTTCCACCGAGAGAACTCACAAACCGGCAGGCACCGAAGACCGCTTTTACTGGATTTACTCGCCAGGAGCTCTTCCAGGACTACATTAATATCAGCGTAGAACTAGACGGAAAGCCCACGTACACGTGCAAGTTGTGTCCCAACAAGGTGTATGCAAGACAAATCTCAATCAGAAATCACATGCGCATTCACGAGAATCCAACTTATAAAGAACGTTCATGTCATGTCTGCCACAAGACCTTTCTGCGGCGCGACACGCTCCTCGTACACTTGCGAACCCACACCAATGAAAGAAAATACAAGTGCAACGTTTGCGAGGCATCTTTCACACATTCCAGTTCGCTAGTGTCTCACAAGCGCATACACAGCGGTGAAAAGCCGTACGTCTGCACCATTTGCAGCAAGTCATTCCGCGAGTCTGGCCAGTTAACAGCCCACAAGAAGATCCACTTCGCAAAAGTCTTGCAGTGTCCAAAGTGCGAAAAGAAATTCACCTCTAACAAAACTCTTCGAGTTCACTGTCGAACGCACACCGACGAGCGTCCATACACCTGCTCCTACTGTTCGAAAATGTTTCGCTGCACCACCAGCTTGACCACTCACTTGCGGGTTCATACGGGTGAAAAGCCGTACAAATGTGAAATATGTTCATACGCGACCAAGCAGTCCGGGTACCTCAGAACACACATGCGTACCCACACCGGCGAGCGACCCTACAAGTGTACGTACTGCGAAAAAGCGTTTTCCGAAAAGAAACGACTCGTCACCCACACCCGGAGCCACACCGGGGAACGCCCATACAAATGTATTTACTGCGATTCAGCATTCGCCCGGACGGATAACCTCAAGTACCACCTTCGAACGCATACCGGCGAAAAACCGTACGAATGTGGTGAGTGTGGTAAGCGGTTCGCGCAGGGTACCACGCTCAGTATTCATCAAAAAATCCACACAGGAGTTAAGCCCTATTCTTGCCCACATTGCGCCATGAAGTTTCGACAAAGTGGCACTCTCGTCACACACCTGCTGATGCACACCAATGAAAGGCCATTCAAATGCGATCTCTGCGAGCGAGGATTCCGGCAGAAAGCGCTGCTGAAGCGACATGTTGCCAGTGCTCACGGCACTGTTATGTAA
Protein Sequence: MAGQMTQMEFSDMVKDGTCTFSDWPDEEEEDDEQYTGILLTEDMIKQEPEFIIGSDDAEEEQKIRAFLNKDTIDDEERQQLNWLTCMICDERFLSTKELSLHVQEHTKTALKQENDEMLVPPRELTNRQAPKTAFTGFTRQELFQDYINISVELDGKPTYTCKLCPNKVYARQISIRNHMRIHENPTYKERSCHVCHKTFLRRDTLLVHLRTHTNERKYKCNVCEASFTHSSSLVSHKRIHSGEKPYVCTICSKSFRESGQLTAHKKIHFAKVLQCPKCEKKFTSNKTLRVHCRTHTDERPYTCSYCSKMFRCTTSLTTHLRVHTGEKPYKCEICSYATKQSGYLRTHMRTHTGERPYKCTYCEKAFSEKKRLVTHTRSHTGERPYKCIYCDSAFARTDNLKYHLRTHTGEKPYECGECGKRFAQGTTLSIHQKIHTGVKPYSCPHCAMKFRQSGTLVTHLLMHTNERPFKCDLCERGFRQKALLKRHVASAHGTVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01395957;
90% Identity: iTF_00672345;
80% Identity: iTF_00671873;