Basic Information

Gene Symbol
ct_1
Assembly
GCA_944738805.1
Location
CALYJE010000088.1:176148-206092[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-26 1.1e-22 79.9 0.0 3 71 649 718 647 724 0.94
2 3 5.6e-32 5.3e-28 96.9 0.0 3 77 1061 1136 1059 1138 0.96
3 3 6.3e-31 6e-27 93.6 0.0 3 77 1278 1353 1276 1355 0.96

Sequence Information

Coding Sequence
ATGGACACAACAACAATCGCATCCAGTACAGCGACGATGACCGATGACCGCGAAAGCAGCGTCGTCACCACAACCAGTTGTGTCGGTGGGCCAACAGTGGGTGGTAGTACAGATGCTAGTAAGCTTATCACTGCAATGACAGCCGAAATGAATCTGCACCAAGACTCCAGTAGTGATGCGGCAACGCTATCGGCAAGCAGAGATCAAATGCCAAACCGCAAGATAATAAGCAATCACACACAGAAAAGGGATCCTATTTCAAGTCTGACACTCAGCTCACGCCCAACACCACCACCACGTCATCAACGCTGCCATTTCCATCTTGCCAACATAAAAGCCATGTTGGTCGGAGATGTTGTCTTCTCTTCGCGCGTGCATAGGAATGCAAGAATTAAAGCACTTATCGACGAGGTAAACCGACTGCAAACCCTCCAAGAAACCCACATTGTACAAATACAAAGACTTGAAGATAATCTAGAAGCGAAGCGTCAACATATTCTGAGATTGGAGGCACGCCTCGAGCAGAAGCAACAGCTAAAAACTGATGTCCCACCTGCGTCAAAACCAAGTCCCGATCTGTACCAAGGGGATGAGGAGGCAACACCCTCTGCAACAGAACCTCCTCCATTGGCGACAGTCGTTCACGCAGATGAAGTACACATTAAAAAGGAAAATCAGACTCCTCTTGGAATTGACATTACAAGTCAGTCAGTTGCAGTTGCCGCTGCCGCTGTTGCCGCTGCGGCCAACGATCCTAAGCATTTTCAGGAAATTTTACTCGAGAGAACCAAGGCATTAGCAGCTGCCGCACATGCCACCACCGAGGCGCTGAAACCCGAAGGAATTTCCAGTGACACGACGTCGGCAGATACCGATAAGGAAACTGCTGAGAACGATCCGCTTAGTTCTGAACCGAACGATTCAAGTCAGCAACAGGAGCAGCAACAGGAGCTGCGACCTCTATCAGAATCAACTGCACCTCAAATTCCCGCAGATCAAGTCACATCGTCGTCCAACTTTCAGAGCGTTGATCAGTTTGGATCTATGCTGGGCGGTGAGCTAGTCAATTCATACTGGCGTCGTGGTTTTGATTTATCAGCTGATCTTAAGTTGCCACCGCCACCACATCACCTGTCCCTCGCAGCCGCGGCTCCCCTGTCATCCGTACAACAGGGGCCACCAGCAGCAGCCGTCGTGTCGATAGCCCATCCACAGCCATCGATAATATCACCAGCAAATCCAACGCCTAAAACGCCAACATCAATCTTTCAAAATTTCCCATCAATTCTTTCGTGCCGATCACCTCCACCACTCTCAATGCCGGCCACAGGACCATCAACCGCTACCCTTTTGAGTCAACTAGTTAATTCAACCTTCTCATCAAACTCAACCCCTTCTCTTCGAACAGATACCCACTCTGCGTTGACAACGTCAacaacaacaaccaccggcgtccacctgcaaccatcctctcaacagcttcatcaacagcagcaccaccaccaccaccagcaacatcagcagcaccagcaccaacaacagcaacatgcctccgctttgcaacatcatcagcaacaacaacaacaccagcaccaagactacgaaaaagccaacagccatcacgACTCATCGTCCACGGCGAGCACACCCAATCTTCAAGATCAGCGCTCAAATGACGAACACTTGAATGGCGGTGGTATTAAATCCGCCAAGGAGGACAATAACAACTCTCTCGGGTCCTTAGCACATTTACCGCCGGCATTCTTGCCGGGCCTGCCATTCCAATTCCAAGATCGCGGTCACTTCCGTTTCGCCGAGGACATTCAGCTGCCACCCGGTGCATCGATGGCAGGCCGTCTCGGGGAGTCCCTCATCCCCAAGGGGGATCCCATGGAGGCAAAGCTCCAAGAAATGCTTCGCTACAATATGGACAAGTACGCCAATCAGAGTCTGGACACATTGCACATATCAAGACGTGTACGCGAGCTGCTCTCCGTCCACAACATCGGACAGAGGCTTTTCGCAAAATACATCCTCGGCCTCAGCCAGGGTACCGTTTCCGAGCTCCTGTCCAAGCCAAAGCCCTGGGATAAGTTGACTGAGAAGGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTACTCAAATCGCTGATACCGAAAAAAGACTCGGGCATACCCCAATACGGCCGAAATGAGGACTCGATGTCTGACGATCGTATAGCGCATATCTTAAACGAAGCTTCCAGCCTTATGAAGACCCCTCAGGGACCGAGTGCACAGTTGCATCAACAAATCCAGCACGAAGCTCAGCGTCAACAACAACAGCAACAACAACACCAGCATTCTTCTTCCGTCGAGGACTCGCACAGTAACGAAGACTCCAAGTCCCCTCATGCATCGTGCACCTCTCCATTTTACAAGGACTCATCATCACAGCAGCAGCGGCAAGATGTTCATCGCCGAAGCGTAAAACCCGAAGACATGTCTCAAGATAAAGTTGCACGAATATACCAGGAGGAGTTAGCAAAGCTCATGAGTCGCACCCCTCGTGACGCATTTCCAAGTGGGGCTGGTGGCCTTCCGCCCACCAACAGCGCAATTCCGCCTGACGATAATATTCGCATCACACTGGAGGCCTACCACCGCGAAATGGCAAAATTACAACAAAATAGTAGTGGAAATATACCAAATTTTCCAACATTTTCTAGCCTAATGGCGCTTCAGCAGCAAGTCTTGAACGGAGCCCAAGATCTATCCGTCCCAAAAGAAAACGAAATGAAAGTAAATGGCCAACGGAACTCCCTGGAGCAATGCGAGAGTAATCAAACCAAAGAAACCAGCGATGAGGCGGCACTGCGCCATTCGAGCGCATTTAGTCTAGTTCGTAACAAGCCAGAATCTACGGCTGTGCCGAACTCTAATTCCAATACAAATACGAACTCTGCTGCTCCCAGTCCACTCAGTAACTCAATTCTGCCACCGGCAATGACACCCACTGACGATTTCTCCACCGCAGCCAGTCCACTGCAACGAATGGCATCAATCACAAACTCACTGATCACCCAGCCACCAGTGACACCGCATCATACTCAGCCACAGCGACCGACGAAAGCTGTCCTCCCACCCATTACTCAACAACAATTTGACATGTTTAACAATCTAAACACTGAGGAAATTGTTCGTCGCGTGAAAGAGGCCTTGTCACAGTACTCCATTAGCCAGCGATTGTTTGGTGAATCTGTTTTGGGTCTGTCACAAGGCTCCGTATCGGACCTGCTTGCCAGGCCCAAACCCTGGCACATGCTGACCCAGAAAGGCCGTGAACCATTTATTCGCATGAAAATGTTTTTGGAGGACGAGAATGCCGTTCACAAACTAGTCGCCAGCCAGTACAAGATCGCTCCGGAGAAACTTATGCGTACCGGCAGCTACAGTGGCAGCCCACAAATACCTCAAGGCCTGGCCAACAAAATGAACAGCATTCCAATGCAAAAGATGATGAACGAGTTGAAGATGCAGGAGCCACAGGCACAGCACATTATGCAGCAGATGCAGGCTGCATCTGCAATGGCAGTAGCCGCCGCCGCTGGTCACATGCAAAACGCACAGCATCAGGGTATGCTGTTAACTACACCGGGACTACCACCACAGCACACCATAAGCCTCCAGCAGGCCGCTGCTGCAGCCGCAAACGAAAAGAAACCTATGATGATGCCAATTCACTCGCCACACCAAGCCAATGCCATGCGCTCTAGCATGCACCAGCACATGTCACCAACTGTGTACGAGATGGCCGCTCTTACGCAAGACCTCGATACACAAGTCATTACTACCAAGATCAAAGAAGCTCTGCTCGCAAACAACATTGGCCAGAAAATTTTCGGAGAAGCAGTGCTCGGTTTATCGCAAGGCTCTGTCTCCGAGCTACTCTCGAAACCTAAGCCATGGCATATGCTCAGCATAAAAGGCCGGGAACCTTTTATCCGAATGCAACTTTGGCTGTCGGATGCCAATAATGTCGAGCGATTGCAGGTACTTAAGAACGAACGCCGAGAAGCAAGCAAGCGTCGTCGTTCCACCGGGCCCAATCAGCAAGACAACAGTTCCGACACCAGCAGTAACGACACCGCCGACTTTTACACCAGCAGTCCTGGGCCGGGATCAGTAGGATCTGTGGGTGCGCCACCGAACAAAAAACAGCGAGTTCTTTTCTCAGAAGAACAAAAGGAAGCCCTTCGCCTGGCATTTGCACTCGATCCGTACCCGAATGTGGGTACGATTGAATTTCTTGCTAACGAACTCGGTTTAGCCACTCGCACAATCACGAACTGGTTCCACAATCATCGTATGCGCCTCAAACAACAGGTTCCGCACGGCCAACCGACGGAGCCCGTGCCGAGCCGCGAAAATACCAACGCGACACCATTTGATCCCGTCCAGTTTCGTATACTTCTTAATCAAAGACTGATGGAATTGCAGAAAGAGCGCATGGGCCTCAGTAACGCACCTATTCCCTACCCACCCTACTTCGCCGCCAACCCGAATCTCGCGGCATTGATCGGACGCGGTCTCCTCCCCGGTGGAGGTGAACCAGATCTCCAAGCCCTTAACAACGCCTTCAAGGAACAAATGAGTGGCTTAGATCTATCGTTAAAGCGTGAGCGCGATGACGACTTTGAAGACGATGGTGAGGGTGACAGCCACCTGTCGGATAATGAATCTATCAATGGGAGCGACGAAAAATCCGAGTTAAATGAGACACCCCGTTCATCAATCTCTGGAACCGGCATCCAGTCGCGCACTTCACGTCGCAAGCCCGCCGCCCCACAGTGGGTTAATCCCGATTGGCAAGGTGATGGTAAGACGGGTCTCATGCCACCGCTCCCCGCAGGCGCTACCGACAAAGAGGTCATAATCAACGGCGTTTGTGTAATGCAACAGCAAGCGGCCGACTACAGTCGAAAGTCGTCTGTTCCCGCCGCCGAGGAAGAGGATGACGTTGCATCCGATGGCAATGAAGAGGAGCCTTCGAACCATCATCGCACCCAGTCTTCCGACTGCGATGACCCATCCGCAGATATCGATCAGCGATTCATGGAGCCCGAGGTCCGAATCAAACAAGAAGACTGTGACAGCAATGACAGCCATCAGGACGATCATGACGCCGACGTTAGAAAGCAACCCATCCACCGGGAAGACGAAGATGACACACCTGGCGTATGGAACTACTAG
Protein Sequence
MDTTTIASSTATMTDDRESSVVTTTSCVGGPTVGGSTDASKLITAMTAEMNLHQDSSSDAATLSASRDQMPNRKIISNHTQKRDPISSLTLSSRPTPPPRHQRCHFHLANIKAMLVGDVVFSSRVHRNARIKALIDEVNRLQTLQETHIVQIQRLEDNLEAKRQHILRLEARLEQKQQLKTDVPPASKPSPDLYQGDEEATPSATEPPPLATVVHADEVHIKKENQTPLGIDITSQSVAVAAAAVAAAANDPKHFQEILLERTKALAAAAHATTEALKPEGISSDTTSADTDKETAENDPLSSEPNDSSQQQEQQQELRPLSESTAPQIPADQVTSSSNFQSVDQFGSMLGGELVNSYWRRGFDLSADLKLPPPPHHLSLAAAAPLSSVQQGPPAAAVVSIAHPQPSIISPANPTPKTPTSIFQNFPSILSCRSPPPLSMPATGPSTATLLSQLVNSTFSSNSTPSLRTDTHSALTTSTTTTTGVHLQPSSQQLHQQQHHHHHQQHQQHQHQQQQHASALQHHQQQQQHQHQDYEKANSHHDSSSTASTPNLQDQRSNDEHLNGGGIKSAKEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPSAQLHQQIQHEAQRQQQQQQQHQHSSSVEDSHSNEDSKSPHASCTSPFYKDSSSQQQRQDVHRRSVKPEDMSQDKVARIYQEELAKLMSRTPRDAFPSGAGGLPPTNSAIPPDDNIRITLEAYHREMAKLQQNSSGNIPNFPTFSSLMALQQQVLNGAQDLSVPKENEMKVNGQRNSLEQCESNQTKETSDEAALRHSSAFSLVRNKPESTAVPNSNSNTNTNSAAPSPLSNSILPPAMTPTDDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAVAAAAGHMQNAQHQGMLLTTPGLPPQHTISLQQAAAAAANEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSNAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSELNETPRSSISGTGIQSRTSRRKPAAPQWVNPDWQGDGKTGLMPPLPAGATDKEVIINGVCVMQQQAADYSRKSSVPAAEEEDDVASDGNEEEPSNHHRTQSSDCDDPSADIDQRFMEPEVRIKQEDCDSNDSHQDDHDADVRKQPIHREDEDDTPGVWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00671499;
80% Identity
iTF_00671499;